RNA–Protein interactions for RNA: ENST00000484958.5

FXR1-219, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 3

Gene FXR1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-219ENST00000484958 BCL2L12Q9HB09 334 aa13.24□□□□□ -0.29
FXR1-219ENST00000484958 PTPREP23469 700 aa13.23□□□□□ -0.29
FXR1-219ENST00000484958 PTGDRQ13258 359 aa13.23□□□□□ -0.29
FXR1-219ENST00000484958 ADAM33Q9BZ11 813 aa13.21□□□□□ -0.29
FXR1-219ENST00000484958 MINK1Q8N4C8 1332 aaPredicted RBP13.19□□□□□ -0.3
FXR1-219ENST00000484958 PRIM1P49642 420 aaKnown RBP13.19□□□□□ -0.3
FXR1-219ENST00000484958 GPR37O15354 613 aa13.18□□□□□ -0.3
FXR1-219ENST00000484958 RBM27Q9P2N5 1060 aaKnown RBP13.18□□□□□ -0.3
FXR1-219ENST00000484958 TSR1Q2NL82 804 aaKnown RBP13.17□□□□□ -0.3
FXR1-219ENST00000484958 AK7Q96M32 723 aa13.17□□□□□ -0.3
FXR1-219ENST00000484958 MAP2K5Q13163 448 aa13.16□□□□□ -0.3
FXR1-219ENST00000484958 VARS2Q5ST30 1063 aaKnown RBP13.16□□□□□ -0.3
FXR1-219ENST00000484958 PPP1R3GB7ZBB8 358 aa13.15□□□□□ -0.3
FXR1-219ENST00000484958 PBX2P40425 430 aa13.15□□□□□ -0.3
FXR1-219ENST00000484958 CDHR5Q9HBB8 845 aa13.14□□□□□ -0.31
FXR1-219ENST00000484958 NPDC1Q9NQX5 325 aaPredicted RBP13.14□□□□□ -0.31
FXR1-219ENST00000484958 MARVELD3Q96A59 401 aa13.13□□□□□ -0.31
FXR1-219ENST00000484958 FAM205CA6NFA0 338 aa13.12□□□□□ -0.31
FXR1-219ENST00000484958 SLC24A3Q9HC58 644 aa13.12□□□□□ -0.31
FXR1-219ENST00000484958 ARHGAP33O14559 1287 aa13.1□□□□□ -0.31
FXR1-219ENST00000484958 IRF6O14896 467 aa13.1□□□□□ -0.31
FXR1-219ENST00000484958 PRSS12P56730 875 aa13.1□□□□□ -0.31
FXR1-219ENST00000484958 ZNF687Q8N1G0 1237 aa13.1□□□□□ -0.31
FXR1-219ENST00000484958 KCNK17Q96T54 332 aa13.09□□□□□ -0.31
FXR1-219ENST00000484958 ONECUT3O60422 494 aaPredicted RBP13.08□□□□□ -0.32
FXR1-219ENST00000484958 OATP04181 439 aa13.08□□□□□ -0.32
FXR1-219ENST00000484958 CDCA7LQ96GN5 454 aa13.07□□□□□ -0.32
FXR1-219ENST00000484958 PACS2Q86VP3 889 aa13.05□□□□□ -0.32
FXR1-219ENST00000484958 HS3ST6Q96QI5 342 aa13.05□□□□□ -0.32
FXR1-219ENST00000484958 COL9A1P20849 921 aa13.03□□□□□ -0.32
FXR1-219ENST00000484958 PADI6Q6TGC4 694 aa13.03□□□□□ -0.32
FXR1-219ENST00000484958 CCDC102AQ96A19 550 aa13.03□□□□□ -0.32
FXR1-219ENST00000484958 SLC4A5Q9BY07 1137 aa13.03□□□□□ -0.32
FXR1-219ENST00000484958 FECHP22830 423 aa13.02□□□□□ -0.33
FXR1-219ENST00000484958 TTC13Q8NBP0 860 aa13.02□□□□□ -0.33
FXR1-219ENST00000484958 DAXXQ9UER7 740 aaPredicted RBP13.02□□□□□ -0.33
FXR1-219ENST00000484958 TRIM6-TRIM34B2RNG4 842 aa13.01□□□□□ -0.33
FXR1-219ENST00000484958 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
FXR1-219ENST00000484958 RBM46Q8TBY0 533 aaKnown RBP13.01□□□□□ -0.33
FXR1-219ENST00000484958 TRIM66O15016 1216 aa13□□□□□ -0.33
FXR1-219ENST00000484958 ZBED2Q9BTP6 218 aa12.98□□□□□ -0.33
FXR1-219ENST00000484958 PSEN2P49810 448 aa12.97□□□□□ -0.33
FXR1-219ENST00000484958 LCE2DQ5TA82 110 aaPredicted RBP12.97□□□□□ -0.33
FXR1-219ENST00000484958 ADGRG1Q9Y653 693 aa12.97□□□□□ -0.33
FXR1-219ENST00000484958 NEUROD2Q15784 382 aa12.96□□□□□ -0.33
FXR1-219ENST00000484958 AMHR2Q16671 573 aa12.96□□□□□ -0.33
FXR1-219ENST00000484958 TK2O00142 265 aa12.95□□□□□ -0.34
FXR1-219ENST00000484958 PDE4DQ08499 809 aa12.95□□□□□ -0.34
FXR1-219ENST00000484958 RABGEF1Q9UJ41 708 aa12.95□□□□□ -0.34
FXR1-219ENST00000484958 METTL3Q86U44 580 aaKnown RBP12.94□□□□□ -0.34
FXR1-219ENST00000484958 TSKSQ9UJT2 592 aa12.94□□□□□ -0.34
FXR1-219ENST00000484958 NBPF3Q9H094 633 aa12.93□□□□□ -0.34
FXR1-219ENST00000484958 AXIN2Q9Y2T1 843 aa12.93□□□□□ -0.34
FXR1-219ENST00000484958 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.92□□□□□ -0.34
FXR1-219ENST00000484958 CLCN1P35523 988 aa12.92□□□□□ -0.34
FXR1-219ENST00000484958 PXYLP1Q8TE99 480 aa12.92□□□□□ -0.34
FXR1-219ENST00000484958 TATDN2Q93075 761 aa12.92□□□□□ -0.34
FXR1-219ENST00000484958 PNMA3Q9UL41 463 aa12.92□□□□□ -0.34
FXR1-219ENST00000484958 TTLL12Q14166 644 aaPredicted RBP12.91□□□□□ -0.34
FXR1-219ENST00000484958 PROX2Q3B8N5 592 aa12.91□□□□□ -0.34
FXR1-219ENST00000484958 KIAA1468Q9P260 1216 aa12.91□□□□□ -0.34
FXR1-219ENST00000484958 HDGFP51858 240 aaKnown RBP12.9□□□□□ -0.34
FXR1-219ENST00000484958 BRPF1P55201 1214 aaPredicted RBP12.9□□□□□ -0.34
FXR1-219ENST00000484958 LSM11P83369 360 aaKnown RBP eCLIP12.9□□□□□ -0.34
FXR1-219ENST00000484958 POTEEQ6S8J3 1075 aa12.9□□□□□ -0.34
FXR1-219ENST00000484958 NUDT18Q6ZVK8 323 aa12.9□□□□□ -0.34
FXR1-219ENST00000484958 STAC3Q96MF2 364 aa12.9□□□□□ -0.34
FXR1-219ENST00000484958 VPS9D1Q9Y2B5 631 aa12.9□□□□□ -0.34
FXR1-219ENST00000484958 DMRTA1Q5VZB9 504 aa12.89□□□□□ -0.35
FXR1-219ENST00000484958 POTEB3A0JP26 581 aa12.88□□□□□ -0.35
FXR1-219ENST00000484958 DNAJB2P25686 324 aa12.88□□□□□ -0.35
FXR1-219ENST00000484958 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
FXR1-219ENST00000484958 POTEBQ6S5H4 581 aa12.88□□□□□ -0.35
FXR1-219ENST00000484958 LAPTM4BQ86VI4 370 aa12.88□□□□□ -0.35
FXR1-219ENST00000484958 EYA1Q99502 592 aa12.87□□□□□ -0.35
FXR1-219ENST00000484958 GPCPD1Q9NPB8 672 aa12.87□□□□□ -0.35
FXR1-219ENST00000484958 FAM198AQ9UFP1 575 aa12.87□□□□□ -0.35
FXR1-219ENST00000484958 FAM161AQ3B820 660 aa12.85□□□□□ -0.35
FXR1-219ENST00000484958 ADGRD1Q6QNK2 874 aa12.84□□□□□ -0.35
FXR1-219ENST00000484958 RCCD1A6NED2 376 aa12.83□□□□□ -0.36
FXR1-219ENST00000484958 MDM2Q00987 491 aaPredicted RBP12.83□□□□□ -0.36
FXR1-219ENST00000484958 FAM98CQ17RN3 349 aaKnown RBP12.83□□□□□ -0.36
FXR1-219ENST00000484958 RSPH4AQ5TD94 716 aa12.83□□□□□ -0.36
FXR1-219ENST00000484958 KDM4CQ9H3R0 1056 aa12.83□□□□□ -0.36
FXR1-219ENST00000484958 SULF1Q8IWU6 871 aa12.82□□□□□ -0.36
FXR1-219ENST00000484958 PARP9Q8IXQ6 854 aa12.82□□□□□ -0.36
FXR1-219ENST00000484958 MRPL50Q8N5N7 158 aaKnown RBP12.82□□□□□ -0.36
FXR1-219ENST00000484958 POTEGQ6S5H5 508 aa12.81□□□□□ -0.36
FXR1-219ENST00000484958 ANKRD13DQ6ZTN6 518 aa12.81□□□□□ -0.36
FXR1-219ENST00000484958 DDRGK1Q96HY6 314 aa12.8□□□□□ -0.36
FXR1-219ENST00000484958 POTEMA6NI47 508 aa12.79□□□□□ -0.36
FXR1-219ENST00000484958 GIGYF2Q6Y7W6 1299 aaKnown RBP12.79□□□□□ -0.36
FXR1-219ENST00000484958 PHOX2BQ99453 314 aa12.79□□□□□ -0.36
FXR1-219ENST00000484958 TMEM134Q9H6X4 195 aa12.79□□□□□ -0.36
FXR1-219ENST00000484958 GOLGA8CPA6NN73 597 aa12.78□□□□□ -0.36
FXR1-219ENST00000484958 BHMG1C9JSJ3 638 aaPredicted RBP12.78□□□□□ -0.36
FXR1-219ENST00000484958 TMEM132AQ24JP5 1023 aa12.78□□□□□ -0.36
FXR1-219ENST00000484958 NECTIN2Q92692 538 aa12.78□□□□□ -0.36
FXR1-219ENST00000484958 SMAPO00193 183 aa12.77□□□□□ -0.37
FXR1-219ENST00000484958 TMUB1Q9BVT8 246 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms