RNA–Protein interactions for RNA: ENST00000484840.5

GTF2I-209, Transcript of general transcription factor IIi, humanhuman

TSL 4

Gene GTF2I, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-209ENST00000484840 EMILIN3Q9NT22 766 aa11.23□□□□□ -0.61
GTF2I-209ENST00000484840 ITGBL1O95965 494 aaPredicted RBP11.22□□□□□ -0.61
GTF2I-209ENST00000484840 MRPL50Q8N5N7 158 aaKnown RBP11.22□□□□□ -0.61
GTF2I-209ENST00000484840 ZNF454Q8N9F8 522 aa11.21□□□□□ -0.61
GTF2I-209ENST00000484840 ARIH1Q9Y4X5 557 aaPredicted RBP11.19□□□□□ -0.62
GTF2I-209ENST00000484840 SLC24A1O60721 1099 aa11.18□□□□□ -0.62
GTF2I-209ENST00000484840 PTPREP23469 700 aa11.16□□□□□ -0.62
GTF2I-209ENST00000484840 UPF1Q92900 1129 aaKnown RBP eCLIP11.15□□□□□ -0.62
GTF2I-209ENST00000484840 FOSBP53539 338 aa11.14□□□□□ -0.63
GTF2I-209ENST00000484840 KCNV2Q8TDN2 545 aa11.14□□□□□ -0.63
GTF2I-209ENST00000484840 TRAF7Q6Q0C0 670 aa11.13□□□□□ -0.63
GTF2I-209ENST00000484840 MAP3K9P80192 1104 aa11.12□□□□□ -0.63
GTF2I-209ENST00000484840 LAPTM4AQ15012 233 aa11.12□□□□□ -0.63
GTF2I-209ENST00000484840 NBPF3Q9H094 633 aa11.12□□□□□ -0.63
GTF2I-209ENST00000484840 DPYSL4O14531 572 aa11.11□□□□□ -0.63
GTF2I-209ENST00000484840 P3H3Q8IVL6 736 aa11.11□□□□□ -0.63
GTF2I-209ENST00000484840 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
GTF2I-209ENST00000484840 ANO8Q9HCE9 1232 aaPredicted RBP11.11□□□□□ -0.63
GTF2I-209ENST00000484840 EVI5O60447 810 aa11.08□□□□□ -0.64
GTF2I-209ENST00000484840 PDIA6Q15084 440 aa11.07□□□□□ -0.64
GTF2I-209ENST00000484840 GFRA3O60609 400 aa11.06□□□□□ -0.64
GTF2I-209ENST00000484840 ADAM33Q9BZ11 813 aa11.06□□□□□ -0.64
GTF2I-209ENST00000484840 SPDYE16A6NNV3 312 aaPredicted RBP11.05□□□□□ -0.64
GTF2I-209ENST00000484840 ANKK1Q8NFD2 765 aa11.05□□□□□ -0.64
GTF2I-209ENST00000484840 BCAMP50895 628 aa11.04□□□□□ -0.64
GTF2I-209ENST00000484840 KCNC4Q03721 635 aa11.04□□□□□ -0.64
GTF2I-209ENST00000484840 JPH4Q96JJ6 628 aa11.03□□□□□ -0.64
GTF2I-209ENST00000484840 ZDHHC16Q969W1 377 aa11.02□□□□□ -0.65
GTF2I-209ENST00000484840 SOWAHBA6NEL2 793 aa11.01□□□□□ -0.65
GTF2I-209ENST00000484840 RABGEF1Q9UJ41 708 aa11.01□□□□□ -0.65
GTF2I-209ENST00000484840 NYAP1Q6ZVC0 841 aa11□□□□□ -0.65
GTF2I-209ENST00000484840 WBP1LQ9NX94 342 aa10.99□□□□□ -0.65
GTF2I-209ENST00000484840 PROX2Q3B8N5 592 aa10.98□□□□□ -0.65
GTF2I-209ENST00000484840 PPP1R3GB7ZBB8 358 aa10.95□□□□□ -0.66
GTF2I-209ENST00000484840 LAPTM4BQ86VI4 370 aa10.95□□□□□ -0.66
GTF2I-209ENST00000484840 NRG2O14511 850 aaPredicted RBP10.93□□□□□ -0.66
GTF2I-209ENST00000484840 PHF14O94880 888 aa10.93□□□□□ -0.66
GTF2I-209ENST00000484840 ZFRQ96KR1 1074 aaKnown RBP10.93□□□□□ -0.66
GTF2I-209ENST00000484840 PCDHGA10Q9Y5H3 936 aa10.93□□□□□ -0.66
GTF2I-209ENST00000484840 SEMA3EO15041 775 aa10.92□□□□□ -0.66
GTF2I-209ENST00000484840 COL9A1P20849 921 aa10.92□□□□□ -0.66
GTF2I-209ENST00000484840 ZNF787Q6DD87 383 aa10.91□□□□□ -0.66
GTF2I-209ENST00000484840 DDX12PQ92771 950 aa10.91□□□□□ -0.66
GTF2I-209ENST00000484840 EPAS1Q99814 870 aa10.91□□□□□ -0.66
GTF2I-209ENST00000484840 TESPA1A2RU30 521 aaPredicted RBP10.9□□□□□ -0.66
GTF2I-209ENST00000484840 ZNF775Q96BV0 537 aaPredicted RBP10.9□□□□□ -0.66
GTF2I-209ENST00000484840 MLLT3P42568 568 aaPredicted RBP10.89□□□□□ -0.67
GTF2I-209ENST00000484840 TYW1BQ6NUM6 668 aa10.88□□□□□ -0.67
GTF2I-209ENST00000484840 FBXW7Q969H0 707 aa10.88□□□□□ -0.67
GTF2I-209ENST00000484840 KIAA1468Q9P260 1216 aa10.88□□□□□ -0.67
GTF2I-209ENST00000484840 GRXCR2A6NFK2 248 aa10.87□□□□□ -0.67
GTF2I-209ENST00000484840 OSBPP22059 807 aa10.87□□□□□ -0.67
GTF2I-209ENST00000484840 PRKD2Q9BZL6 878 aa10.87□□□□□ -0.67
GTF2I-209ENST00000484840 PRIM1P49642 420 aaKnown RBP10.85□□□□□ -0.67
GTF2I-209ENST00000484840 NBR1Q14596 966 aa10.84□□□□□ -0.67
GTF2I-209ENST00000484840 SEPT9Q9UHD8 586 aaPredicted RBP10.83□□□□□ -0.68
GTF2I-209ENST00000484840 TSR3Q9UJK0 312 aaKnown RBP10.83□□□□□ -0.68
GTF2I-209ENST00000484840 ONECUT3O60422 494 aaPredicted RBP10.82□□□□□ -0.68
GTF2I-209ENST00000484840 EN1Q05925 392 aaPredicted RBP10.82□□□□□ -0.68
GTF2I-209ENST00000484840 HPS5Q9UPZ3 1129 aa10.81□□□□□ -0.68
GTF2I-209ENST00000484840 C6orf132Q5T0Z8 1188 aa10.8□□□□□ -0.68
GTF2I-209ENST00000484840 SMYD5Q6GMV2 418 aa10.8□□□□□ -0.68
GTF2I-209ENST00000484840 V9GY48 417 aaPredicted RBP10.8□□□□□ -0.68
GTF2I-209ENST00000484840 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.79□□□□□ -0.68
GTF2I-209ENST00000484840 TJAP1Q5JTD0 557 aa10.78□□□□□ -0.68
GTF2I-209ENST00000484840 RBM33Q96EV2 1170 aaKnown RBP10.78□□□□□ -0.68
GTF2I-209ENST00000484840 CCDC180Q9P1Z9 1646 aa10.77□□□□□ -0.68
GTF2I-209ENST00000484840 FAM98CQ17RN3 349 aaKnown RBP10.77□□□□□ -0.69
GTF2I-209ENST00000484840 MAP3K7O43318 606 aa10.76□□□□□ -0.69
GTF2I-209ENST00000484840 TSR1Q2NL82 804 aaKnown RBP10.76□□□□□ -0.69
GTF2I-209ENST00000484840 PPP1R18Q6NYC8 613 aa10.75□□□□□ -0.69
GTF2I-209ENST00000484840 LRCH3Q96II8 777 aa10.75□□□□□ -0.69
GTF2I-209ENST00000484840 PDZRN3Q9UPQ7 1066 aa10.74□□□□□ -0.69
GTF2I-209ENST00000484840 TRIM6-TRIM34B2RNG4 842 aa10.72□□□□□ -0.69
GTF2I-209ENST00000484840 RBM26Q5T8P6 1007 aaKnown RBP10.72□□□□□ -0.69
GTF2I-209ENST00000484840 BCANQ96GW7 911 aa10.72□□□□□ -0.69
GTF2I-209ENST00000484840 NPDC1Q9NQX5 325 aaPredicted RBP10.72□□□□□ -0.69
GTF2I-209ENST00000484840 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.71□□□□□ -0.69
GTF2I-209ENST00000484840 CDHR5Q9HBB8 845 aa10.71□□□□□ -0.69
GTF2I-209ENST00000484840 TULP1O00294 542 aaPredicted RBP10.69□□□□□ -0.7
GTF2I-209ENST00000484840 CERKQ8TCT0 537 aa10.69□□□□□ -0.7
GTF2I-209ENST00000484840 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.68□□□□□ -0.7
GTF2I-209ENST00000484840 PPP4CP60510 307 aa10.67□□□□□ -0.7
GTF2I-209ENST00000484840 PTGDRQ13258 359 aa10.67□□□□□ -0.7
GTF2I-209ENST00000484840 MTRQ99707 1265 aa10.66□□□□□ -0.7
GTF2I-209ENST00000484840 NUTM2FA1L443 756 aa10.65□□□□□ -0.7
GTF2I-209ENST00000484840 GPR37O15354 613 aa10.65□□□□□ -0.7
GTF2I-209ENST00000484840 IL21Q9HBE4 155 aa10.65□□□□□ -0.7
GTF2I-209ENST00000484840 PRSS12P56730 875 aa10.64□□□□□ -0.71
GTF2I-209ENST00000484840 LMOD2Q6P5Q4 547 aa10.64□□□□□ -0.71
GTF2I-209ENST00000484840 ZNF516Q92618 1163 aa10.64□□□□□ -0.71
GTF2I-209ENST00000484840 POTECB2RU33 542 aa10.63□□□□□ -0.71
GTF2I-209ENST00000484840 FCHSD2O94868 740 aa10.63□□□□□ -0.71
GTF2I-209ENST00000484840 TTC13Q8NBP0 860 aa10.63□□□□□ -0.71
GTF2I-209ENST00000484840 RBM27Q9P2N5 1060 aaKnown RBP10.63□□□□□ -0.71
GTF2I-209ENST00000484840 CDCA7LQ96GN5 454 aa10.62□□□□□ -0.71
GTF2I-209ENST00000484840 GPIHBP1Q8IV16 184 aa10.61□□□□□ -0.71
GTF2I-209ENST00000484840 TSKSQ9UJT2 592 aa10.61□□□□□ -0.71
GTF2I-209ENST00000484840 LCE2AQ5TA79 106 aaPredicted RBP10.6□□□□□ -0.71
GTF2I-209ENST00000484840 FAM198AQ9UFP1 575 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms