RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 PLXNC1O60486 1568 aa23.27■■□□□ 1.32
HLA-F-226ENST00000484704 IQSEC2Q5JU85 1478 aa23.25■■□□□ 1.31
HLA-F-226ENST00000484704 UBAP1LF5GYI3 381 aa23.25■■□□□ 1.31
HLA-F-226ENST00000484704 PKD2Q13563 968 aa23.25■■□□□ 1.31
HLA-F-226ENST00000484704 DHX29Q7Z478 1369 aaKnown RBP23.25■■□□□ 1.31
HLA-F-226ENST00000484704 PTPN23Q9H3S7 1636 aa23.24■■□□□ 1.31
HLA-F-226ENST00000484704 KIF3BO15066 747 aa23.22■■□□□ 1.31
HLA-F-226ENST00000484704 PPP6R1Q9UPN7 881 aa23.22■■□□□ 1.31
HLA-F-226ENST00000484704 FGD6Q6ZV73 1430 aa23.22■■□□□ 1.31
HLA-F-226ENST00000484704 FBXO31Q5XUX0 539 aaPredicted RBP23.21■■□□□ 1.31
HLA-F-226ENST00000484704 MYO3AQ8NEV4 1616 aa23.2■■□□□ 1.3
HLA-F-226ENST00000484704 SPATA31D1Q6ZQQ2 1576 aa23.2■■□□□ 1.3
HLA-F-226ENST00000484704 PLA2R1Q13018 1463 aa23.2■■□□□ 1.3
HLA-F-226ENST00000484704 TCOF1Q13428 1488 aaKnown RBP23.2■■□□□ 1.3
HLA-F-226ENST00000484704 CEP170BQ9Y4F5 1589 aaPredicted RBP23.19■■□□□ 1.3
HLA-F-226ENST00000484704 FAM50AQ14320 339 aaKnown RBP23.18■■□□□ 1.3
HLA-F-226ENST00000484704 MAST1Q9Y2H9 1570 aa23.18■■□□□ 1.3
HLA-F-226ENST00000484704 ZNF142P52746 1687 aaPredicted RBP23.15■■□□□ 1.3
HLA-F-226ENST00000484704 PPARGC1BQ86YN6 1023 aaKnown RBP23.13■■□□□ 1.29
HLA-F-226ENST00000484704 A2ML1A8K2U0 1454 aa23.12■■□□□ 1.29
HLA-F-226ENST00000484704 ABCC5O15440 1437 aa23.12■■□□□ 1.29
HLA-F-226ENST00000484704 DAPK1P53355 1430 aa23.12■■□□□ 1.29
HLA-F-226ENST00000484704 CROCC2H7BZ55 1655 aa23.11■■□□□ 1.29
HLA-F-226ENST00000484704 DNMT1P26358 1616 aaKnown RBP23.11■■□□□ 1.29
HLA-F-226ENST00000484704 SHANK2Q9UPX8 1470 aa23.11■■□□□ 1.29
HLA-F-226ENST00000484704 WASHC2CQ9Y4E1 1318 aa23.1■■□□□ 1.29
HLA-F-226ENST00000484704 RRP7BPQ9NSQ0 103 aa23.1■■□□□ 1.29
HLA-F-226ENST00000484704 CHIC2Q9UKJ5 165 aa23.1■■□□□ 1.29
HLA-F-226ENST00000484704 TNRQ92752 1358 aa23.1■■□□□ 1.29
HLA-F-226ENST00000484704 KIF15Q9NS87 1388 aa23.08■■□□□ 1.29
HLA-F-226ENST00000484704 DUOX2Q9NRD8 1548 aa23.08■■□□□ 1.28
HLA-F-226ENST00000484704 PIP4K2BP78356 416 aa23.07■■□□□ 1.28
HLA-F-226ENST00000484704 SCAF1Q9H7N4 1312 aaKnown RBP23.07■■□□□ 1.28
HLA-F-226ENST00000484704 ANKRD30AQ9BXX3 1397 aa23.06■■□□□ 1.28
HLA-F-226ENST00000484704 KDM5DQ9BY66 1539 aa23.06■■□□□ 1.28
HLA-F-226ENST00000484704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.05■■□□□ 1.28
HLA-F-226ENST00000484704 HSPA1LP34931 641 aa23.05■■□□□ 1.28
HLA-F-226ENST00000484704 EIF2AK4Q9P2K8 1649 aaKnown RBP23.04■■□□□ 1.28
HLA-F-226ENST00000484704 ANKLE2Q86XL3 938 aa23.03■■□□□ 1.28
HLA-F-226ENST00000484704 FAM135AQ9P2D6 1515 aa23.03■■□□□ 1.28
HLA-F-226ENST00000484704 PZPP20742 1482 aa23.02■■□□□ 1.28
HLA-F-226ENST00000484704 NEURL4Q96JN8 1562 aa23.01■■□□□ 1.27
HLA-F-226ENST00000484704 TOM1O60784 492 aa23■■□□□ 1.27
HLA-F-226ENST00000484704 THEMISQ8N1K5 641 aaPredicted RBP23■■□□□ 1.27
HLA-F-226ENST00000484704 ERBINQ96RT1 1412 aa22.99■■□□□ 1.27
HLA-F-226ENST00000484704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.99■■□□□ 1.27
HLA-F-226ENST00000484704 RNF17Q9BXT8 1623 aaKnown RBP22.99■■□□□ 1.27
HLA-F-226ENST00000484704 ITGAEP38570 1179 aa22.96■■□□□ 1.27
HLA-F-226ENST00000484704 KANK1Q14678 1352 aa22.95■■□□□ 1.26
HLA-F-226ENST00000484704 ZC3H13Q5T200 1668 aaKnown RBP22.95■■□□□ 1.26
HLA-F-226ENST00000484704 CPS1P31327 1500 aa22.94■■□□□ 1.26
HLA-F-226ENST00000484704 ABCC3O15438 1527 aa22.92■■□□□ 1.26
HLA-F-226ENST00000484704 ADGRL2O95490 1459 aa22.92■■□□□ 1.26
HLA-F-226ENST00000484704 NPHP4O75161 1426 aaPredicted RBP22.92■■□□□ 1.26
HLA-F-226ENST00000484704 POLR1AO95602 1720 aaPredicted RBP22.92■■□□□ 1.26
HLA-F-226ENST00000484704 UGGT1Q9NYU2 1555 aa22.92■■□□□ 1.26
HLA-F-226ENST00000484704 NLRP1Q9C000 1473 aa22.92■■□□□ 1.26
HLA-F-226ENST00000484704 VWDEQ8N2E2 1590 aa22.91■■□□□ 1.26
HLA-F-226ENST00000484704 CEP152O94986 1710 aa22.91■■□□□ 1.26
HLA-F-226ENST00000484704 SENP3Q9H4L4 574 aaPredicted RBP22.9■■□□□ 1.26
HLA-F-226ENST00000484704 MROH1Q8NDA8 1641 aa22.89■■□□□ 1.25
HLA-F-226ENST00000484704 MED14O60244 1454 aa22.88■■□□□ 1.25
HLA-F-226ENST00000484704 PRDM15P57071 1507 aaPredicted RBP22.87■■□□□ 1.25
HLA-F-226ENST00000484704 ANKRD50Q9ULJ7 1429 aa22.86■■□□□ 1.25
HLA-F-226ENST00000484704 MED1Q15648 1581 aaPredicted RBP22.85■■□□□ 1.25
HLA-F-226ENST00000484704 ALKQ9UM73 1620 aa22.85■■□□□ 1.25
HLA-F-226ENST00000484704 DEPDC5O75140 1603 aa22.83■■□□□ 1.25
HLA-F-226ENST00000484704 CFAP65Q6ZU64 1925 aaKnown RBP22.83■■□□□ 1.25
HLA-F-226ENST00000484704 ERVK-7P63135 1459 aa22.81■■□□□ 1.24
HLA-F-226ENST00000484704 ROCK1Q13464 1354 aa22.81■■□□□ 1.24
HLA-F-226ENST00000484704 LTKP29376 864 aa22.8■■□□□ 1.24
HLA-F-226ENST00000484704 LRRC7Q96NW7 1537 aa22.79■■□□□ 1.24
HLA-F-226ENST00000484704 STRCP1A6NGW2 1772 aa22.78■■□□□ 1.24
HLA-F-226ENST00000484704 IQGAP1P46940 1657 aa22.77■■□□□ 1.24
HLA-F-226ENST00000484704 RRBP1Q9P2E9 1410 aaKnown RBP22.77■■□□□ 1.24
HLA-F-226ENST00000484704 ARHGAP31Q2M1Z3 1444 aa22.76■■□□□ 1.23
HLA-F-226ENST00000484704 TXNDC2Q86VQ3 553 aa22.76■■□□□ 1.23
HLA-F-226ENST00000484704 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
HLA-F-226ENST00000484704 LMTK2Q8IWU2 1503 aa22.73■■□□□ 1.23
HLA-F-226ENST00000484704 STAG3Q9UJ98 1225 aa22.73■■□□□ 1.23
HLA-F-226ENST00000484704 SCAF11Q99590 1463 aaKnown RBP22.7■■□□□ 1.22
HLA-F-226ENST00000484704 UBR1Q8IWV7 1749 aa22.68■■□□□ 1.22
HLA-F-226ENST00000484704 EFCAB6Q5THR3 1501 aa22.68■■□□□ 1.22
HLA-F-226ENST00000484704 UNC13BO14795 1591 aa22.67■■□□□ 1.22
HLA-F-226ENST00000484704 ARHGAP23Q9P227 1491 aa22.66■■□□□ 1.22
HLA-F-226ENST00000484704 EID1Q9Y6B2 187 aa22.66■■□□□ 1.22
HLA-F-226ENST00000484704 NUP155O75694 1391 aa22.65■■□□□ 1.22
HLA-F-226ENST00000484704 RGS17Q9UGC6 210 aaPredicted RBP22.65■■□□□ 1.22
HLA-F-226ENST00000484704 TET3O43151 1660 aa22.65■■□□□ 1.22
HLA-F-226ENST00000484704 SLIT1O75093 1534 aa22.64■■□□□ 1.21
HLA-F-226ENST00000484704 IDI1Q13907 227 aa22.63■■□□□ 1.21
HLA-F-226ENST00000484704 RPRD2Q5VT52 1461 aaKnown RBP22.62■■□□□ 1.21
HLA-F-226ENST00000484704 RBM33Q96EV2 1170 aaKnown RBP22.62■■□□□ 1.21
HLA-F-226ENST00000484704 SYNMO15061 1565 aa22.62■■□□□ 1.21
HLA-F-226ENST00000484704 GCC2Q8IWJ2 1684 aa22.62■■□□□ 1.21
HLA-F-226ENST00000484704 TMEM2Q9UHN6 1383 aa22.61■■□□□ 1.21
HLA-F-226ENST00000484704 SLC26A8Q96RN1 970 aa22.6■■□□□ 1.21
HLA-F-226ENST00000484704 PIK3C2BO00750 1634 aa22.6■■□□□ 1.21
HLA-F-226ENST00000484704 SLC52A1Q9NWF4 448 aa22.59■■□□□ 1.21
HLA-F-226ENST00000484704 IQGAP3Q86VI3 1631 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms