RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 A2MP01023 1474 aa27.82■■■□□ 2.04
RNF38-207ENST00000484621 CEP170BQ9Y4F5 1589 aaPredicted RBP27.82■■■□□ 2.04
RNF38-207ENST00000484621 TCOF1Q13428 1488 aaKnown RBP27.81■■■□□ 2.04
RNF38-207ENST00000484621 MED1Q15648 1581 aaPredicted RBP27.79■■■□□ 2.04
RNF38-207ENST00000484621 PTPRKQ15262 1439 aa27.78■■■□□ 2.04
RNF38-207ENST00000484621 TSPY4P0CV99 314 aa27.78■■■□□ 2.04
RNF38-207ENST00000484621 TSPY10P0CW01 314 aa27.78■■■□□ 2.04
RNF38-207ENST00000484621 PLXNC1O60486 1568 aa27.77■■■□□ 2.04
RNF38-207ENST00000484621 PLA2R1Q13018 1463 aa27.77■■■□□ 2.04
RNF38-207ENST00000484621 PTPN23Q9H3S7 1636 aa27.76■■■□□ 2.03
RNF38-207ENST00000484621 HSPA1LP34931 641 aa27.72■■■□□ 2.03
RNF38-207ENST00000484621 FGD6Q6ZV73 1430 aa27.72■■■□□ 2.03
RNF38-207ENST00000484621 DHX29Q7Z478 1369 aaKnown RBP27.7■■■□□ 2.02
RNF38-207ENST00000484621 MAST1Q9Y2H9 1570 aa27.69■■■□□ 2.02
RNF38-207ENST00000484621 PKD2Q13563 968 aa27.68■■■□□ 2.02
RNF38-207ENST00000484621 NEURL4Q96JN8 1562 aa27.68■■■□□ 2.02
RNF38-207ENST00000484621 GGT6Q6P531 493 aa27.67■■■□□ 2.02
RNF38-207ENST00000484621 DNMT1P26358 1616 aaKnown RBP27.67■■■□□ 2.02
RNF38-207ENST00000484621 PPP6R1Q9UPN7 881 aa27.66■■■□□ 2.02
RNF38-207ENST00000484621 CROCC2H7BZ55 1655 aa27.65■■■□□ 2.02
RNF38-207ENST00000484621 PIP4K2BP78356 416 aa27.64■■■□□ 2.02
RNF38-207ENST00000484621 SCAF1Q9H7N4 1312 aaKnown RBP27.64■■■□□ 2.01
RNF38-207ENST00000484621 ALKQ9UM73 1620 aa27.63■■■□□ 2.01
RNF38-207ENST00000484621 KIF3BO15066 747 aa27.62■■■□□ 2.01
RNF38-207ENST00000484621 A2ML1A8K2U0 1454 aa27.61■■■□□ 2.01
RNF38-207ENST00000484621 POLR1AO95602 1720 aaPredicted RBP27.61■■■□□ 2.01
RNF38-207ENST00000484621 ABCC5O15440 1437 aa27.59■■■□□ 2.01
RNF38-207ENST00000484621 DAPK1P53355 1430 aa27.58■■■□□ 2.01
RNF38-207ENST00000484621 SHANK2Q9UPX8 1470 aa27.58■■■□□ 2.01
RNF38-207ENST00000484621 FAM50AQ14320 339 aaKnown RBP27.58■■■□□ 2.01
RNF38-207ENST00000484621 PPARGC1BQ86YN6 1023 aaKnown RBP27.58■■■□□ 2.01
RNF38-207ENST00000484621 VWDEQ8N2E2 1590 aa27.54■■■□□ 2
RNF38-207ENST00000484621 CPS1P31327 1500 aa27.52■■■□□ 2
RNF38-207ENST00000484621 FBXO31Q5XUX0 539 aaPredicted RBP27.52■■■□□ 2
RNF38-207ENST00000484621 DUOX2Q9NRD8 1548 aa27.51■■□□□ 1.99
RNF38-207ENST00000484621 KIF15Q9NS87 1388 aa27.5■■□□□ 1.99
RNF38-207ENST00000484621 EIF2AK4Q9P2K8 1649 aaKnown RBP27.5■■□□□ 1.99
RNF38-207ENST00000484621 RRP7BPQ9NSQ0 103 aa27.5■■□□□ 1.99
RNF38-207ENST00000484621 CHIC2Q9UKJ5 165 aa27.5■■□□□ 1.99
RNF38-207ENST00000484621 SENP3Q9H4L4 574 aaPredicted RBP27.47■■□□□ 1.99
RNF38-207ENST00000484621 RNF17Q9BXT8 1623 aaKnown RBP27.47■■□□□ 1.99
RNF38-207ENST00000484621 STRCP1A6NGW2 1772 aa27.47■■□□□ 1.99
RNF38-207ENST00000484621 KDM5DQ9BY66 1539 aa27.46■■□□□ 1.99
RNF38-207ENST00000484621 TNRQ92752 1358 aa27.46■■□□□ 1.99
RNF38-207ENST00000484621 ANKRD30AQ9BXX3 1397 aa27.46■■□□□ 1.99
RNF38-207ENST00000484621 FAM135AQ9P2D6 1515 aa27.46■■□□□ 1.99
RNF38-207ENST00000484621 WASHC2CQ9Y4E1 1318 aa27.45■■□□□ 1.99
RNF38-207ENST00000484621 TOM1O60784 492 aa27.44■■□□□ 1.98
RNF38-207ENST00000484621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.44■■□□□ 1.98
RNF38-207ENST00000484621 ERBINQ96RT1 1412 aa27.41■■□□□ 1.98
RNF38-207ENST00000484621 PZPP20742 1482 aa27.4■■□□□ 1.98
RNF38-207ENST00000484621 ZC3H13Q5T200 1668 aaKnown RBP27.38■■□□□ 1.97
RNF38-207ENST00000484621 PHF23Q9BUL5 403 aaPredicted RBP27.38■■□□□ 1.97
RNF38-207ENST00000484621 ADGRL2O95490 1459 aa27.38■■□□□ 1.97
RNF38-207ENST00000484621 MROH1Q8NDA8 1641 aa27.37■■□□□ 1.97
RNF38-207ENST00000484621 NPHP4O75161 1426 aaPredicted RBP27.36■■□□□ 1.97
RNF38-207ENST00000484621 CEP152O94986 1710 aa27.36■■□□□ 1.97
RNF38-207ENST00000484621 ABCC3O15438 1527 aa27.35■■□□□ 1.97
RNF38-207ENST00000484621 DEPDC5O75140 1603 aa27.34■■□□□ 1.97
RNF38-207ENST00000484621 IQGAP1P46940 1657 aa27.33■■□□□ 1.97
RNF38-207ENST00000484621 MED14O60244 1454 aa27.32■■□□□ 1.96
RNF38-207ENST00000484621 LRRC7Q96NW7 1537 aa27.32■■□□□ 1.96
RNF38-207ENST00000484621 UGGT1Q9NYU2 1555 aa27.32■■□□□ 1.96
RNF38-207ENST00000484621 ITGAEP38570 1179 aa27.31■■□□□ 1.96
RNF38-207ENST00000484621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.31■■□□□ 1.96
RNF38-207ENST00000484621 CFAP65Q6ZU64 1925 aaKnown RBP27.31■■□□□ 1.96
RNF38-207ENST00000484621 ANKLE2Q86XL3 938 aa27.3■■□□□ 1.96
RNF38-207ENST00000484621 RGS17Q9UGC6 210 aaPredicted RBP27.3■■□□□ 1.96
RNF38-207ENST00000484621 PRDM15P57071 1507 aaPredicted RBP27.3■■□□□ 1.96
RNF38-207ENST00000484621 KANK1Q14678 1352 aa27.27■■□□□ 1.96
RNF38-207ENST00000484621 NLRP1Q9C000 1473 aa27.25■■□□□ 1.95
RNF38-207ENST00000484621 ANKRD50Q9ULJ7 1429 aa27.24■■□□□ 1.95
RNF38-207ENST00000484621 SYNMO15061 1565 aa27.23■■□□□ 1.95
RNF38-207ENST00000484621 RRBP1Q9P2E9 1410 aaKnown RBP27.23■■□□□ 1.95
RNF38-207ENST00000484621 ROCK1Q13464 1354 aa27.22■■□□□ 1.95
RNF38-207ENST00000484621 THEMISQ8N1K5 641 aaPredicted RBP27.21■■□□□ 1.95
RNF38-207ENST00000484621 XIRP1Q702N8 1843 aaKnown RBP27.2■■□□□ 1.95
RNF38-207ENST00000484621 ERVK-7P63135 1459 aa27.18■■□□□ 1.94
RNF38-207ENST00000484621 ARHGAP31Q2M1Z3 1444 aa27.15■■□□□ 1.94
RNF38-207ENST00000484621 UBR1Q8IWV7 1749 aa27.13■■□□□ 1.93
RNF38-207ENST00000484621 LMTK2Q8IWU2 1503 aa27.13■■□□□ 1.93
RNF38-207ENST00000484621 UNC13BO14795 1591 aa27.09■■□□□ 1.93
RNF38-207ENST00000484621 EFCAB6Q5THR3 1501 aa27.08■■□□□ 1.93
RNF38-207ENST00000484621 POTEAQ6S8J7 498 aa27.08■■□□□ 1.93
RNF38-207ENST00000484621 SETD1AO15047 1707 aaKnown RBP27.07■■□□□ 1.92
RNF38-207ENST00000484621 LTKP29376 864 aa27.05■■□□□ 1.92
RNF38-207ENST00000484621 SCAF11Q99590 1463 aaKnown RBP27.05■■□□□ 1.92
RNF38-207ENST00000484621 TET3O43151 1660 aa27.05■■□□□ 1.92
RNF38-207ENST00000484621 GCC2Q8IWJ2 1684 aa27.03■■□□□ 1.92
RNF38-207ENST00000484621 ARHGAP23Q9P227 1491 aa27.01■■□□□ 1.91
RNF38-207ENST00000484621 IQGAP3Q86VI3 1631 aa27■■□□□ 1.91
RNF38-207ENST00000484621 NUP155O75694 1391 aa26.98■■□□□ 1.91
RNF38-207ENST00000484621 SLIT1O75093 1534 aa26.98■■□□□ 1.91
RNF38-207ENST00000484621 RPRD2Q5VT52 1461 aaKnown RBP26.98■■□□□ 1.91
RNF38-207ENST00000484621 PIK3C2BO00750 1634 aa26.97■■□□□ 1.91
RNF38-207ENST00000484621 NAIPQ13075 1403 aa26.96■■□□□ 1.91
RNF38-207ENST00000484621 NOS1P29475 1434 aa26.95■■□□□ 1.9
RNF38-207ENST00000484621 ROBO1Q9Y6N7 1651 aa26.95■■□□□ 1.9
RNF38-207ENST00000484621 STAG3Q9UJ98 1225 aa26.94■■□□□ 1.9
RNF38-207ENST00000484621 E9PCH4 1651 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms