RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 KIDINS220Q9ULH0 1771 aa9.71□□□□□ -0.85
PDZRN3-209ENST00000484487 SPAG9O60271 1321 aaKnown RBP9.71□□□□□ -0.86
PDZRN3-209ENST00000484487 HFM1A2PYH4 1435 aa9.71□□□□□ -0.86
PDZRN3-209ENST00000484487 ATP7AQ04656 1500 aa9.71□□□□□ -0.86
PDZRN3-209ENST00000484487 ATXN8OSP0DMR3 200 aa9.7□□□□□ -0.86
PDZRN3-209ENST00000484487 CHIC2Q9UKJ5 165 aa9.7□□□□□ -0.86
PDZRN3-209ENST00000484487 NCOA1Q15788 1441 aa9.7□□□□□ -0.86
PDZRN3-209ENST00000484487 SETD5Q9C0A6 1442 aa9.7□□□□□ -0.86
PDZRN3-209ENST00000484487 MLH3Q9UHC1 1453 aa9.7□□□□□ -0.86
PDZRN3-209ENST00000484487 ZMYM4Q5VZL5 1548 aa9.7□□□□□ -0.86
PDZRN3-209ENST00000484487 ZFYVE16Q7Z3T8 1539 aa9.7□□□□□ -0.86
PDZRN3-209ENST00000484487 KDM6BO15054 1643 aa9.69□□□□□ -0.86
PDZRN3-209ENST00000484487 HRCP23327 699 aa9.69□□□□□ -0.86
PDZRN3-209ENST00000484487 MAGI2Q86UL8 1455 aa9.69□□□□□ -0.86
PDZRN3-209ENST00000484487 AFAP1Q8N556 730 aa9.69□□□□□ -0.86
PDZRN3-209ENST00000484487 DUOX2Q9NRD8 1548 aa9.69□□□□□ -0.86
PDZRN3-209ENST00000484487 MYT1LQ9UL68 1186 aa9.69□□□□□ -0.86
PDZRN3-209ENST00000484487 FRMPD1Q5SYB0 1578 aa9.68□□□□□ -0.86
PDZRN3-209ENST00000484487 NAIPQ13075 1403 aa9.68□□□□□ -0.86
PDZRN3-209ENST00000484487 RRP7BPQ9NSQ0 103 aa9.67□□□□□ -0.86
PDZRN3-209ENST00000484487 EIF2AK4Q9P2K8 1649 aaKnown RBP9.67□□□□□ -0.86
PDZRN3-209ENST00000484487 KIF15Q9NS87 1388 aa9.66□□□□□ -0.86
PDZRN3-209ENST00000484487 RAPGEF3O95398 923 aa9.66□□□□□ -0.86
PDZRN3-209ENST00000484487 ABCA6Q8N139 1617 aa9.66□□□□□ -0.86
PDZRN3-209ENST00000484487 BCORL1Q5H9F3 1711 aa9.65□□□□□ -0.87
PDZRN3-209ENST00000484487 ERBINQ96RT1 1412 aa9.65□□□□□ -0.87
PDZRN3-209ENST00000484487 ANKRD50Q9ULJ7 1429 aa9.65□□□□□ -0.87
PDZRN3-209ENST00000484487 RAB3GAP2Q9H2M9 1393 aa9.64□□□□□ -0.87
PDZRN3-209ENST00000484487 DIP2CQ9Y2E4 1556 aa9.64□□□□□ -0.87
PDZRN3-209ENST00000484487 REREQ9P2R6 1566 aa9.63□□□□□ -0.87
PDZRN3-209ENST00000484487 A2MP01023 1474 aa9.63□□□□□ -0.87
PDZRN3-209ENST00000484487 ARHGEF40Q8TER5 1519 aa9.62□□□□□ -0.87
PDZRN3-209ENST00000484487 COL17A1Q9UMD9 1497 aaPredicted RBP9.62□□□□□ -0.87
PDZRN3-209ENST00000484487 UNC13BO14795 1591 aa9.62□□□□□ -0.87
PDZRN3-209ENST00000484487 DHX29Q7Z478 1369 aaKnown RBP9.62□□□□□ -0.87
PDZRN3-209ENST00000484487 ATP10AO60312 1499 aa9.61□□□□□ -0.87
PDZRN3-209ENST00000484487 DEPDC5O75140 1603 aa9.61□□□□□ -0.87
PDZRN3-209ENST00000484487 RNF17Q9BXT8 1623 aaKnown RBP9.6□□□□□ -0.87
PDZRN3-209ENST00000484487 TRIM52Q96A61 297 aa9.59□□□□□ -0.87
PDZRN3-209ENST00000484487 ZBTB12Q9Y330 459 aaPredicted RBP9.59□□□□□ -0.87
PDZRN3-209ENST00000484487 KDM5DQ9BY66 1539 aa9.59□□□□□ -0.87
PDZRN3-209ENST00000484487 IQGAP3Q86VI3 1631 aa9.59□□□□□ -0.87
PDZRN3-209ENST00000484487 YEATS2Q9ULM3 1422 aa9.58□□□□□ -0.88
PDZRN3-209ENST00000484487 AGLP35573 1532 aa9.58□□□□□ -0.88
PDZRN3-209ENST00000484487 RBM42Q9BTD8 480 aaKnown RBP9.57□□□□□ -0.88
PDZRN3-209ENST00000484487 KANK1Q14678 1352 aa9.57□□□□□ -0.88
PDZRN3-209ENST00000484487 ZC3H13Q5T200 1668 aaKnown RBP9.57□□□□□ -0.88
PDZRN3-209ENST00000484487 NUP155O75694 1391 aa9.56□□□□□ -0.88
PDZRN3-209ENST00000484487 KIF3BO15066 747 aa9.56□□□□□ -0.88
PDZRN3-209ENST00000484487 CCER1Q8TC90 406 aaPredicted RBP9.56□□□□□ -0.88
PDZRN3-209ENST00000484487 PRDM15P57071 1507 aaPredicted RBP9.56□□□□□ -0.88
PDZRN3-209ENST00000484487 FAM135AQ9P2D6 1515 aa9.56□□□□□ -0.88
PDZRN3-209ENST00000484487 TET3O43151 1660 aa9.55□□□□□ -0.88
PDZRN3-209ENST00000484487 CEP152O94986 1710 aa9.55□□□□□ -0.88
PDZRN3-209ENST00000484487 CLSPNQ9HAW4 1339 aa9.55□□□□□ -0.88
PDZRN3-209ENST00000484487 DHX57Q6P158 1386 aaKnown RBP9.54□□□□□ -0.88
PDZRN3-209ENST00000484487 MROH1Q8NDA8 1641 aa9.54□□□□□ -0.88
PDZRN3-209ENST00000484487 VWDEQ8N2E2 1590 aa9.54□□□□□ -0.88
PDZRN3-209ENST00000484487 CFAP65Q6ZU64 1925 aaKnown RBP9.53□□□□□ -0.88
PDZRN3-209ENST00000484487 MPHOSPH9Q99550 1183 aa9.53□□□□□ -0.88
PDZRN3-209ENST00000484487 PZPP20742 1482 aa9.53□□□□□ -0.88
PDZRN3-209ENST00000484487 SIGLEC1Q9BZZ2 1709 aa9.52□□□□□ -0.89
PDZRN3-209ENST00000484487 CAMSAP1Q5T5Y3 1602 aa9.52□□□□□ -0.89
PDZRN3-209ENST00000484487 LMTK2Q8IWU2 1503 aa9.51□□□□□ -0.89
PDZRN3-209ENST00000484487 GGT6Q6P531 493 aa9.51□□□□□ -0.89
PDZRN3-209ENST00000484487 E9PCH4 1651 aa9.51□□□□□ -0.89
PDZRN3-209ENST00000484487 CLTCQ00610 1675 aaKnown RBP9.51□□□□□ -0.89
PDZRN3-209ENST00000484487 SPHKAPQ2M3C7 1700 aa9.51□□□□□ -0.89
PDZRN3-209ENST00000484487 FER1L4A9Z1Z3 1794 aa9.5□□□□□ -0.89
PDZRN3-209ENST00000484487 MROH2AA6NES4 1674 aa9.5□□□□□ -0.89
PDZRN3-209ENST00000484487 ARID4BQ4LE39 1312 aaPredicted RBP9.5□□□□□ -0.89
PDZRN3-209ENST00000484487 ZEB1P37275 1124 aaPredicted RBP9.49□□□□□ -0.89
PDZRN3-209ENST00000484487 ABCC3O15438 1527 aa9.49□□□□□ -0.89
PDZRN3-209ENST00000484487 EFCAB6Q5THR3 1501 aa9.49□□□□□ -0.89
PDZRN3-209ENST00000484487 WASHC2CQ9Y4E1 1318 aa9.49□□□□□ -0.89
PDZRN3-209ENST00000484487 RPRD2Q5VT52 1461 aaKnown RBP9.48□□□□□ -0.89
PDZRN3-209ENST00000484487 PKD2Q13563 968 aa9.48□□□□□ -0.89
PDZRN3-209ENST00000484487 ESF1Q9H501 851 aaKnown RBP9.48□□□□□ -0.89
PDZRN3-209ENST00000484487 KIF1BO60333 1816 aa9.47□□□□□ -0.89
PDZRN3-209ENST00000484487 CNTLNQ9NXG0 1405 aa9.47□□□□□ -0.89
PDZRN3-209ENST00000484487 ARHGAP31Q2M1Z3 1444 aa9.46□□□□□ -0.9
PDZRN3-209ENST00000484487 PREX1Q8TCU6 1659 aa9.45□□□□□ -0.9
PDZRN3-209ENST00000484487 MLECQ14165 292 aa9.44□□□□□ -0.9
PDZRN3-209ENST00000484487 ANKRD30BQ9BXX2 1392 aa9.44□□□□□ -0.9
PDZRN3-209ENST00000484487 TRPM2O94759 1503 aa9.44□□□□□ -0.9
PDZRN3-209ENST00000484487 ADAMTSL3P82987 1691 aa9.44□□□□□ -0.9
PDZRN3-209ENST00000484487 C3P01024 1663 aa9.43□□□□□ -0.9
PDZRN3-209ENST00000484487 TIMELESSQ9UNS1 1208 aa9.43□□□□□ -0.9
PDZRN3-209ENST00000484487 RIMS1Q86UR5 1692 aaKnown RBP9.42□□□□□ -0.9
PDZRN3-209ENST00000484487 PTPRTO14522 1441 aa9.42□□□□□ -0.9
PDZRN3-209ENST00000484487 SETD1BQ9UPS6 1966 aaKnown RBP9.42□□□□□ -0.9
PDZRN3-209ENST00000484487 MADDQ8WXG6 1647 aa9.42□□□□□ -0.9
PDZRN3-209ENST00000484487 CCDC144AA2RUR9 1427 aa9.41□□□□□ -0.9
PDZRN3-209ENST00000484487 NPATQ14207 1427 aa9.41□□□□□ -0.9
PDZRN3-209ENST00000484487 ZMYM3Q14202 1370 aa9.4□□□□□ -0.9
PDZRN3-209ENST00000484487 PIK3C2BO00750 1634 aa9.4□□□□□ -0.9
PDZRN3-209ENST00000484487 CLTCL1P53675 1640 aa9.39□□□□□ -0.91
PDZRN3-209ENST00000484487 SPATA31D1Q6ZQQ2 1576 aa9.39□□□□□ -0.91
PDZRN3-209ENST00000484487 NEURL4Q96JN8 1562 aa9.39□□□□□ -0.91
PDZRN3-209ENST00000484487 NEUROD1Q13562 356 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms