RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 CLASRPQ8N2M8 674 aaKnown RBP11.68□□□□□ -0.54
ALMS1-204ENST00000484298 CCDC47Q96A33 483 aaKnown RBP11.68□□□□□ -0.54
ALMS1-204ENST00000484298 GIMAP7Q8NHV1 300 aa11.68□□□□□ -0.54
ALMS1-204ENST00000484298 IFT57Q9NWB7 429 aa11.67□□□□□ -0.54
ALMS1-204ENST00000484298 NAT10Q9H0A0 1025 aaKnown RBP11.67□□□□□ -0.54
ALMS1-204ENST00000484298 MARCH6O60337 910 aa11.67□□□□□ -0.54
ALMS1-204ENST00000484298 TCEAL9Q9UHQ7 104 aa11.67□□□□□ -0.54
ALMS1-204ENST00000484298 MFAP1P55081 439 aaKnown RBP11.67□□□□□ -0.54
ALMS1-204ENST00000484298 TMX4Q9H1E5 349 aaPredicted RBP11.66□□□□□ -0.54
ALMS1-204ENST00000484298 ZNF330Q9Y3S2 320 aaPredicted RBP11.66□□□□□ -0.54
ALMS1-204ENST00000484298 PCMTD1Q96MG8 357 aaPredicted RBP11.66□□□□□ -0.54
ALMS1-204ENST00000484298 DHX8Q14562 1220 aaKnown RBP11.66□□□□□ -0.54
ALMS1-204ENST00000484298 CCDC39Q9UFE4 941 aa11.66□□□□□ -0.54
ALMS1-204ENST00000484298 VPS53Q5VIR6 699 aa11.66□□□□□ -0.54
ALMS1-204ENST00000484298 TRIM6-TRIM34B2RNG4 842 aa11.65□□□□□ -0.54
ALMS1-204ENST00000484298 SPATA24Q86W54 205 aa11.65□□□□□ -0.54
ALMS1-204ENST00000484298 AXDND1Q5T1B0 1012 aaPredicted RBP11.65□□□□□ -0.54
ALMS1-204ENST00000484298 ERLIN2O94905 339 aa11.65□□□□□ -0.54
ALMS1-204ENST00000484298 WWC1Q8IX03 1113 aa11.65□□□□□ -0.54
ALMS1-204ENST00000484298 ABCC9O60706 1549 aa11.64□□□□□ -0.55
ALMS1-204ENST00000484298 GORABQ5T7V8 394 aa11.64□□□□□ -0.55
ALMS1-204ENST00000484298 CT47B1P0C2W7 299 aaPredicted RBP11.64□□□□□ -0.55
ALMS1-204ENST00000484298 ITPRIPQ8IWB1 547 aa11.64□□□□□ -0.55
ALMS1-204ENST00000484298 CARD11Q9BXL7 1154 aa11.64□□□□□ -0.55
ALMS1-204ENST00000484298 CCER2I3L3R5 266 aa11.63□□□□□ -0.55
ALMS1-204ENST00000484298 RALBP1Q15311 655 aa11.63□□□□□ -0.55
ALMS1-204ENST00000484298 NAP1L1P55209 391 aaKnown RBP11.63□□□□□ -0.55
ALMS1-204ENST00000484298 RABEP1Q15276 862 aa11.63□□□□□ -0.55
ALMS1-204ENST00000484298 RRP9O43818 475 aaKnown RBP11.63□□□□□ -0.55
ALMS1-204ENST00000484298 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.63□□□□□ -0.55
ALMS1-204ENST00000484298 EIF3JO75822 258 aaKnown RBP11.63□□□□□ -0.55
ALMS1-204ENST00000484298 RSF1Q96T23 1441 aaPredicted RBP11.63□□□□□ -0.55
ALMS1-204ENST00000484298 U2SURPO15042 1029 aaKnown RBP11.63□□□□□ -0.55
ALMS1-204ENST00000484298 RTF1Q92541 710 aaKnown RBP11.63□□□□□ -0.55
ALMS1-204ENST00000484298 APBB1O00213 710 aa11.62□□□□□ -0.55
ALMS1-204ENST00000484298 HSP90AB2PQ58FF8 381 aa11.62□□□□□ -0.55
ALMS1-204ENST00000484298 CAVIN1Q6NZI2 390 aaKnown RBP11.62□□□□□ -0.55
ALMS1-204ENST00000484298 AKAP17AQ02040 695 aaKnown RBP11.62□□□□□ -0.55
ALMS1-204ENST00000484298 KCNH8Q96L42 1107 aa11.62□□□□□ -0.55
ALMS1-204ENST00000484298 SEPT11Q9NVA2 429 aaKnown RBP11.62□□□□□ -0.55
ALMS1-204ENST00000484298 FAM184AQ8NB25 1140 aa11.61□□□□□ -0.55
ALMS1-204ENST00000484298 RGL3Q3MIN7 710 aa11.61□□□□□ -0.55
ALMS1-204ENST00000484298 DDX11Q96FC9 970 aa11.61□□□□□ -0.55
ALMS1-204ENST00000484298 ENOX2Q16206 610 aaKnown RBP11.61□□□□□ -0.55
ALMS1-204ENST00000484298 LRRFIP1Q32MZ4 808 aaKnown RBP11.6□□□□□ -0.55
ALMS1-204ENST00000484298 KTN1Q86UP2 1357 aaKnown RBP11.6□□□□□ -0.55
ALMS1-204ENST00000484298 RCAN3Q9UKA8 241 aa11.6□□□□□ -0.55
ALMS1-204ENST00000484298 CNKSR2Q8WXI2 1034 aa11.6□□□□□ -0.55
ALMS1-204ENST00000484298 SEPT7Q16181 437 aaKnown RBP11.6□□□□□ -0.55
ALMS1-204ENST00000484298 BCCIPQ9P287 314 aaKnown RBP eCLIP11.6□□□□□ -0.55
ALMS1-204ENST00000484298 IQCEQ6IPM2 695 aa11.6□□□□□ -0.55
ALMS1-204ENST00000484298 CGNL1Q0VF96 1302 aa11.59□□□□□ -0.55
ALMS1-204ENST00000484298 ERLIN1O75477 346 aa11.59□□□□□ -0.55
ALMS1-204ENST00000484298 TXLNBQ8N3L3 684 aa11.59□□□□□ -0.55
ALMS1-204ENST00000484298 FEZ1Q99689 392 aa11.59□□□□□ -0.55
ALMS1-204ENST00000484298 CPLX2Q6PUV4 134 aaKnown RBP11.58□□□□□ -0.56
ALMS1-204ENST00000484298 EEA1Q15075 1411 aa11.58□□□□□ -0.56
ALMS1-204ENST00000484298 EPS15P42566 896 aa11.58□□□□□ -0.56
ALMS1-204ENST00000484298 PHLDB1Q86UU1 1377 aa11.58□□□□□ -0.56
ALMS1-204ENST00000484298 SPAG9O60271 1321 aaKnown RBP11.58□□□□□ -0.56
ALMS1-204ENST00000484298 CFAP57Q96MR6 1250 aa11.58□□□□□ -0.56
ALMS1-204ENST00000484298 CCAR1Q8IX12 1150 aaKnown RBP11.57□□□□□ -0.56
ALMS1-204ENST00000484298 EIF3AQ14152 1382 aaKnown RBP11.57□□□□□ -0.56
ALMS1-204ENST00000484298 SASS6Q6UVJ0 657 aa11.57□□□□□ -0.56
ALMS1-204ENST00000484298 TRIM29Q14134 588 aa11.57□□□□□ -0.56
ALMS1-204ENST00000484298 POGKQ9P215 609 aa11.57□□□□□ -0.56
ALMS1-204ENST00000484298 NF2P35240 595 aa11.57□□□□□ -0.56
ALMS1-204ENST00000484298 SLC26A8Q96RN1 970 aa11.57□□□□□ -0.56
ALMS1-204ENST00000484298 FAM107BQ9H098 131 aa11.57□□□□□ -0.56
ALMS1-204ENST00000484298 RNF20Q5VTR2 975 aa11.57□□□□□ -0.56
ALMS1-204ENST00000484298 NASPP49321 788 aaPredicted RBP11.57□□□□□ -0.56
ALMS1-204ENST00000484298 REC8O95072 547 aa11.56□□□□□ -0.56
ALMS1-204ENST00000484298 PPM1EQ8WY54 764 aa11.56□□□□□ -0.56
ALMS1-204ENST00000484298 LUC7LQ9NQ29 371 aaKnown RBP11.56□□□□□ -0.56
ALMS1-204ENST00000484298 OFD1O75665 1012 aa11.55□□□□□ -0.56
ALMS1-204ENST00000484298 RRP7BPQ9NSQ0 103 aa11.55□□□□□ -0.56
ALMS1-204ENST00000484298 STK31Q9BXU1 1019 aa11.55□□□□□ -0.56
ALMS1-204ENST00000484298 RSPH4AQ5TD94 716 aa11.55□□□□□ -0.56
ALMS1-204ENST00000484298 CC2D1BQ5T0F9 858 aaKnown RBP11.55□□□□□ -0.56
ALMS1-204ENST00000484298 MCTP1Q6DN14 999 aa11.55□□□□□ -0.56
ALMS1-204ENST00000484298 SYNE3Q6ZMZ3 975 aa11.55□□□□□ -0.56
ALMS1-204ENST00000484298 GBP2P32456 591 aaPredicted RBP11.54□□□□□ -0.56
ALMS1-204ENST00000484298 LETM1O95202 739 aaPredicted RBP11.54□□□□□ -0.56
ALMS1-204ENST00000484298 MRE11P49959 708 aa11.54□□□□□ -0.56
ALMS1-204ENST00000484298 SMARCE1Q969G3 411 aa11.54□□□□□ -0.56
ALMS1-204ENST00000484298 TMF1P82094 1093 aa11.54□□□□□ -0.56
ALMS1-204ENST00000484298 KIF7Q2M1P5 1343 aa11.54□□□□□ -0.56
ALMS1-204ENST00000484298 FAM161AQ3B820 660 aa11.54□□□□□ -0.56
ALMS1-204ENST00000484298 KIF3BO15066 747 aa11.54□□□□□ -0.56
ALMS1-204ENST00000484298 NOL8Q76FK4 1167 aaKnown RBP11.54□□□□□ -0.56
ALMS1-204ENST00000484298 BICD2Q8TD16 824 aa11.54□□□□□ -0.56
ALMS1-204ENST00000484298 GOLGA6L10A0A0M3HER8 536 aa11.53□□□□□ -0.56
ALMS1-204ENST00000484298 CCDC43Q96MW1 224 aaKnown RBP11.53□□□□□ -0.56
ALMS1-204ENST00000484298 OLFM4Q6UX06 510 aa11.53□□□□□ -0.56
ALMS1-204ENST00000484298 HMGB1P09429 215 aaKnown RBP11.53□□□□□ -0.56
ALMS1-204ENST00000484298 CLIP1P30622 1438 aa11.52□□□□□ -0.56
ALMS1-204ENST00000484298 CCDC73Q6ZRK6 1079 aa11.52□□□□□ -0.56
ALMS1-204ENST00000484298 CCDC9Q9Y3X0 531 aaKnown RBP11.52□□□□□ -0.57
ALMS1-204ENST00000484298 R3HCC1Q9Y3T6 440 aaKnown RBP11.52□□□□□ -0.57
ALMS1-204ENST00000484298 FANCIQ9NVI1 1328 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms