RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 PDE3BQ13370 1112 aa26.22■■□□□ 1.79
RPUSD3-216ENST00000484134 USP35Q9P2H5 1018 aa26.22■■□□□ 1.79
RPUSD3-216ENST00000484134 NUP155O75694 1391 aa26.22■■□□□ 1.79
RPUSD3-216ENST00000484134 PRKCSHP14314 528 aaPredicted RBP26.22■■□□□ 1.79
RPUSD3-216ENST00000484134 NLRP13Q86W25 1043 aa26.22■■□□□ 1.79
RPUSD3-216ENST00000484134 RTN4Q9NQC3 1192 aaKnown RBP26.21■■□□□ 1.79
RPUSD3-216ENST00000484134 CROCC2H7BZ55 1655 aa26.21■■□□□ 1.79
RPUSD3-216ENST00000484134 ARHGEF12Q9NZN5 1544 aa26.21■■□□□ 1.79
RPUSD3-216ENST00000484134 DCAF11Q8TEB1 546 aa26.21■■□□□ 1.79
RPUSD3-216ENST00000484134 PARD3Q8TEW0 1356 aa26.2■■□□□ 1.78
RPUSD3-216ENST00000484134 ITSN2Q9NZM3 1697 aa26.17■■□□□ 1.78
RPUSD3-216ENST00000484134 WASHC2CQ9Y4E1 1318 aa26.16■■□□□ 1.78
RPUSD3-216ENST00000484134 PER1O15534 1290 aaPredicted RBP26.15■■□□□ 1.78
RPUSD3-216ENST00000484134 CRBNQ96SW2 442 aa26.15■■□□□ 1.78
RPUSD3-216ENST00000484134 PPM1GO15355 546 aaPredicted RBP26.14■■□□□ 1.78
RPUSD3-216ENST00000484134 PLB1Q6P1J6 1458 aa26.1■■□□□ 1.77
RPUSD3-216ENST00000484134 CEP170Q5SW79 1584 aa26.1■■□□□ 1.77
RPUSD3-216ENST00000484134 ZNF608Q9ULD9 1512 aaPredicted RBP26.09■■□□□ 1.77
RPUSD3-216ENST00000484134 C20orf194Q5TEA3 1177 aa26.07■■□□□ 1.76
RPUSD3-216ENST00000484134 ADCY10Q96PN6 1610 aa26.06■■□□□ 1.76
RPUSD3-216ENST00000484134 CC2D1BQ5T0F9 858 aaKnown RBP26.06■■□□□ 1.76
RPUSD3-216ENST00000484134 NBPF1Q3BBV0 1214 aa26.06■■□□□ 1.76
RPUSD3-216ENST00000484134 C9orf84Q5VXU9 1444 aa26.06■■□□□ 1.76
RPUSD3-216ENST00000484134 BLMP54132 1417 aaPredicted RBP26.04■■□□□ 1.76
RPUSD3-216ENST00000484134 SLC4A3P48751 1232 aa26.04■■□□□ 1.76
RPUSD3-216ENST00000484134 KDM5DQ9BY66 1539 aa26.04■■□□□ 1.76
RPUSD3-216ENST00000484134 CDC42BPAQ5VT25 1732 aa26.03■■□□□ 1.76
RPUSD3-216ENST00000484134 DDRGK1Q96HY6 314 aa26.03■■□□□ 1.76
RPUSD3-216ENST00000484134 PTPRGP23470 1445 aa26.01■■□□□ 1.75
RPUSD3-216ENST00000484134 PRAG1Q86YV5 1406 aa26.01■■□□□ 1.75
RPUSD3-216ENST00000484134 NFKBIBQ15653 356 aa26■■□□□ 1.75
RPUSD3-216ENST00000484134 KDM2BQ8NHM5 1336 aa26■■□□□ 1.75
RPUSD3-216ENST00000484134 TRPM1Q7Z4N2 1603 aa25.99■■□□□ 1.75
RPUSD3-216ENST00000484134 BRPF3Q9ULD4 1205 aa25.99■■□□□ 1.75
RPUSD3-216ENST00000484134 SHANK2Q9UPX8 1470 aa25.99■■□□□ 1.75
RPUSD3-216ENST00000484134 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
RPUSD3-216ENST00000484134 DISP3Q9P2K9 1392 aa25.98■■□□□ 1.75
RPUSD3-216ENST00000484134 GSE1Q14687 1217 aa25.97■■□□□ 1.75
RPUSD3-216ENST00000484134 PANK3Q9H999 370 aa25.97■■□□□ 1.75
RPUSD3-216ENST00000484134 TESK2Q96S53 571 aa25.96■■□□□ 1.75
RPUSD3-216ENST00000484134 INSRP06213 1382 aa25.96■■□□□ 1.75
RPUSD3-216ENST00000484134 TSPY4P0CV99 314 aa25.95■■□□□ 1.75
RPUSD3-216ENST00000484134 TSPY10P0CW01 314 aa25.95■■□□□ 1.75
RPUSD3-216ENST00000484134 RGL3Q3MIN7 710 aa25.95■■□□□ 1.75
RPUSD3-216ENST00000484134 COL17A1Q9UMD9 1497 aaPredicted RBP25.94■■□□□ 1.74
RPUSD3-216ENST00000484134 HNRNPMP52272 730 aaKnown RBP eCLIP25.94■■□□□ 1.74
RPUSD3-216ENST00000484134 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
RPUSD3-216ENST00000484134 ZMYM4Q5VZL5 1548 aa25.93■■□□□ 1.74
RPUSD3-216ENST00000484134 ABCC10Q5T3U5 1492 aa25.93■■□□□ 1.74
RPUSD3-216ENST00000484134 ADAMTS8Q9UP79 889 aa25.92■■□□□ 1.74
RPUSD3-216ENST00000484134 GPRASP1Q5JY77 1395 aa25.91■■□□□ 1.74
RPUSD3-216ENST00000484134 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.91■■□□□ 1.74
RPUSD3-216ENST00000484134 C8orf34Q49A92 452 aa25.9■■□□□ 1.74
RPUSD3-216ENST00000484134 FRAT1Q92837 279 aaPredicted RBP25.9■■□□□ 1.74
RPUSD3-216ENST00000484134 PLEKHD1A6NEE1 506 aa25.89■■□□□ 1.73
RPUSD3-216ENST00000484134 IFT140Q96RY7 1462 aa25.89■■□□□ 1.73
RPUSD3-216ENST00000484134 FAM135AQ9P2D6 1515 aa25.89■■□□□ 1.73
RPUSD3-216ENST00000484134 PLEKHH2Q8IVE3 1493 aa25.88■■□□□ 1.73
RPUSD3-216ENST00000484134 CENPQQ7L2Z9 268 aaPredicted RBP25.88■■□□□ 1.73
RPUSD3-216ENST00000484134 CCDC144AA2RUR9 1427 aa25.87■■□□□ 1.73
RPUSD3-216ENST00000484134 PLEKHH1Q9ULM0 1364 aa25.87■■□□□ 1.73
RPUSD3-216ENST00000484134 DUSP27Q5VZP5 1158 aa25.87■■□□□ 1.73
RPUSD3-216ENST00000484134 EIF4G3O43432 1585 aaKnown RBP25.86■■□□□ 1.73
RPUSD3-216ENST00000484134 PLA2R1Q13018 1463 aa25.85■■□□□ 1.73
RPUSD3-216ENST00000484134 FAM161AQ3B820 660 aa25.85■■□□□ 1.73
RPUSD3-216ENST00000484134 A2MP01023 1474 aa25.85■■□□□ 1.73
RPUSD3-216ENST00000484134 ERBINQ96RT1 1412 aa25.85■■□□□ 1.73
RPUSD3-216ENST00000484134 MAGI1Q96QZ7 1491 aaPredicted RBP25.84■■□□□ 1.73
RPUSD3-216ENST00000484134 PRDM15P57071 1507 aaPredicted RBP25.84■■□□□ 1.73
RPUSD3-216ENST00000484134 DAXXQ9UER7 740 aaPredicted RBP25.81■■□□□ 1.72
RPUSD3-216ENST00000484134 ATP10BO94823 1461 aa25.81■■□□□ 1.72
RPUSD3-216ENST00000484134 ZNF521Q96K83 1311 aa25.79■■□□□ 1.72
RPUSD3-216ENST00000484134 FRAT2O75474 233 aaPredicted RBP25.78■■□□□ 1.72
RPUSD3-216ENST00000484134 TMF1P82094 1093 aa25.78■■□□□ 1.72
RPUSD3-216ENST00000484134 ABCA8O94911 1581 aa25.78■■□□□ 1.72
RPUSD3-216ENST00000484134 JPH4Q96JJ6 628 aa25.78■■□□□ 1.72
RPUSD3-216ENST00000484134 ARHGEF5Q12774 1597 aa25.78■■□□□ 1.72
RPUSD3-216ENST00000484134 LAMC1P11047 1609 aa25.77■■□□□ 1.72
RPUSD3-216ENST00000484134 RGS3P49796 1198 aa25.77■■□□□ 1.72
RPUSD3-216ENST00000484134 CHMP7Q8WUX9 453 aaPredicted RBP25.76■■□□□ 1.71
RPUSD3-216ENST00000484134 PPP2R1AP30153 589 aa25.76■■□□□ 1.71
RPUSD3-216ENST00000484134 CARMIL2Q6F5E8 1435 aa25.75■■□□□ 1.71
RPUSD3-216ENST00000484134 MAGI2Q86UL8 1455 aa25.74■■□□□ 1.71
RPUSD3-216ENST00000484134 GOLGA2Q08379 1002 aa25.74■■□□□ 1.71
RPUSD3-216ENST00000484134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.74■■□□□ 1.71
RPUSD3-216ENST00000484134 FBLN2P98095 1184 aa25.72■■□□□ 1.71
RPUSD3-216ENST00000484134 WDR43Q15061 677 aaKnown RBP eCLIP25.72■■□□□ 1.71
RPUSD3-216ENST00000484134 CCDC141Q6ZP82 1450 aa25.71■■□□□ 1.71
RPUSD3-216ENST00000484134 WDR7Q9Y4E6 1490 aa25.71■■□□□ 1.71
RPUSD3-216ENST00000484134 SLFN5Q08AF3 891 aa25.7■■□□□ 1.7
RPUSD3-216ENST00000484134 MYO5CQ9NQX4 1742 aa25.7■■□□□ 1.7
RPUSD3-216ENST00000484134 SYNJ2O15056 1496 aa25.69■■□□□ 1.7
RPUSD3-216ENST00000484134 SPINK5Q9NQ38 1064 aaPredicted RBP25.69■■□□□ 1.7
RPUSD3-216ENST00000484134 SAMD9LQ8IVG5 1584 aa25.69■■□□□ 1.7
RPUSD3-216ENST00000484134 AMER1Q5JTC6 1135 aaPredicted RBP25.69■■□□□ 1.7
RPUSD3-216ENST00000484134 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.68■■□□□ 1.7
RPUSD3-216ENST00000484134 KNSTRNQ9Y448 316 aa25.67■■□□□ 1.7
RPUSD3-216ENST00000484134 TRMT2AQ8IZ69 625 aaKnown RBP25.66■■□□□ 1.7
RPUSD3-216ENST00000484134 USP19O94966 1318 aa25.64■■□□□ 1.7
RPUSD3-216ENST00000484134 BCAR3O75815 825 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms