RNA–Protein interactions for RNA: ENST00000484098.5

STRADB-208, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-208ENST00000484098 WBP1LQ9NX94 342 aa8.47□□□□□ -1.05
STRADB-208ENST00000484098 NKX1-1Q15270 411 aaPredicted RBP8.46□□□□□ -1.06
STRADB-208ENST00000484098 PCDHGA10Q9Y5H3 936 aa8.46□□□□□ -1.06
STRADB-208ENST00000484098 DDX27Q96GQ7 796 aaKnown RBP8.45□□□□□ -1.06
STRADB-208ENST00000484098 KIAA1468Q9P260 1216 aa8.45□□□□□ -1.06
STRADB-208ENST00000484098 FBXW7Q969H0 707 aa8.44□□□□□ -1.06
STRADB-208ENST00000484098 LARP6Q9BRS8 491 aaKnown RBP8.44□□□□□ -1.06
STRADB-208ENST00000484098 SEPT9Q9UHD8 586 aaPredicted RBP8.44□□□□□ -1.06
STRADB-208ENST00000484098 TYW1BQ6NUM6 668 aa8.43□□□□□ -1.06
STRADB-208ENST00000484098 GFRA3O60609 400 aa8.42□□□□□ -1.06
STRADB-208ENST00000484098 TRAF7Q6Q0C0 670 aa8.42□□□□□ -1.06
STRADB-208ENST00000484098 DNAJC5Q9H3Z4 198 aa8.41□□□□□ -1.06
STRADB-208ENST00000484098 LCE2BO14633 110 aa8.4□□□□□ -1.06
STRADB-208ENST00000484098 PHF14O94880 888 aa8.4□□□□□ -1.06
STRADB-208ENST00000484098 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.4□□□□□ -1.06
STRADB-208ENST00000484098 HPS5Q9UPZ3 1129 aa8.4□□□□□ -1.06
STRADB-208ENST00000484098 LRCH3Q96II8 777 aa8.39□□□□□ -1.07
STRADB-208ENST00000484098 EMILIN3Q9NT22 766 aa8.39□□□□□ -1.07
STRADB-208ENST00000484098 TSR3Q9UJK0 312 aaKnown RBP8.39□□□□□ -1.07
STRADB-208ENST00000484098 FAM98CQ17RN3 349 aaKnown RBP8.38□□□□□ -1.07
STRADB-208ENST00000484098 ONECUT3O60422 494 aaPredicted RBP8.37□□□□□ -1.07
STRADB-208ENST00000484098 TRIM6-TRIM34B2RNG4 842 aa8.36□□□□□ -1.07
STRADB-208ENST00000484098 MFSD10Q14728 455 aa8.36□□□□□ -1.07
STRADB-208ENST00000484098 C6orf132Q5T0Z8 1188 aa8.35□□□□□ -1.07
STRADB-208ENST00000484098 PRKD2Q9BZL6 878 aa8.35□□□□□ -1.07
STRADB-208ENST00000484098 NRG2O14511 850 aaPredicted RBP8.34□□□□□ -1.07
STRADB-208ENST00000484098 EPAS1Q99814 870 aa8.33□□□□□ -1.08
STRADB-208ENST00000484098 RBM33Q96EV2 1170 aaKnown RBP8.32□□□□□ -1.08
STRADB-208ENST00000484098 PPP4CP60510 307 aa8.31□□□□□ -1.08
STRADB-208ENST00000484098 GTPBP6O43824 516 aaPredicted RBP8.29□□□□□ -1.08
STRADB-208ENST00000484098 TJAP1Q5JTD0 557 aa8.28□□□□□ -1.08
STRADB-208ENST00000484098 ZNF787Q6DD87 383 aa8.28□□□□□ -1.08
STRADB-208ENST00000484098 PACS2Q86VP3 889 aa8.28□□□□□ -1.08
STRADB-208ENST00000484098 V9GY48 417 aaPredicted RBP8.27□□□□□ -1.09
STRADB-208ENST00000484098 PPP1R18Q6NYC8 613 aa8.26□□□□□ -1.09
STRADB-208ENST00000484098 DDX12PQ92771 950 aa8.26□□□□□ -1.09
STRADB-208ENST00000484098 MTRQ99707 1265 aa8.26□□□□□ -1.09
STRADB-208ENST00000484098 DPYSL4O14531 572 aa8.25□□□□□ -1.09
STRADB-208ENST00000484098 IL21Q9HBE4 155 aa8.25□□□□□ -1.09
STRADB-208ENST00000484098 TSKSQ9UJT2 592 aa8.25□□□□□ -1.09
STRADB-208ENST00000484098 SAMD7Q7Z3H4 446 aa8.24□□□□□ -1.09
STRADB-208ENST00000484098 PDZRN3Q9UPQ7 1066 aa8.24□□□□□ -1.09
STRADB-208ENST00000484098 MAP3K7O43318 606 aa8.23□□□□□ -1.09
STRADB-208ENST00000484098 NBR1Q14596 966 aa8.22□□□□□ -1.09
STRADB-208ENST00000484098 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.22□□□□□ -1.09
STRADB-208ENST00000484098 SMAPO00193 183 aa8.21□□□□□ -1.1
STRADB-208ENST00000484098 RNF40O75150 1001 aa8.21□□□□□ -1.1
STRADB-208ENST00000484098 EN1Q05925 392 aaPredicted RBP8.21□□□□□ -1.1
STRADB-208ENST00000484098 TSR1Q2NL82 804 aaKnown RBP8.21□□□□□ -1.1
STRADB-208ENST00000484098 CADPS2Q86UW7 1296 aa8.21□□□□□ -1.1
STRADB-208ENST00000484098 CAMK2BQ13554 666 aa8.2□□□□□ -1.1
STRADB-208ENST00000484098 ZNF775Q96BV0 537 aaPredicted RBP8.2□□□□□ -1.1
STRADB-208ENST00000484098 ZNF516Q92618 1163 aa8.19□□□□□ -1.1
STRADB-208ENST00000484098 GGCXP38435 758 aa8.17□□□□□ -1.1
STRADB-208ENST00000484098 CDCA7LQ96GN5 454 aa8.17□□□□□ -1.1
STRADB-208ENST00000484098 NBPF26B4DH59 902 aa8.16□□□□□ -1.1
STRADB-208ENST00000484098 PRSS12P56730 875 aa8.15□□□□□ -1.1
STRADB-208ENST00000484098 NKX2-3Q8TAU0 364 aa8.15□□□□□ -1.1
STRADB-208ENST00000484098 PNMA3Q9UL41 463 aa8.15□□□□□ -1.1
STRADB-208ENST00000484098 APLP1P51693 650 aa8.14□□□□□ -1.11
STRADB-208ENST00000484098 HDGFP51858 240 aaKnown RBP8.14□□□□□ -1.11
STRADB-208ENST00000484098 TATDN2Q93075 761 aa8.14□□□□□ -1.11
STRADB-208ENST00000484098 FAM198AQ9UFP1 575 aa8.13□□□□□ -1.11
STRADB-208ENST00000484098 C3orf80F5H4A9 247 aa8.12□□□□□ -1.11
STRADB-208ENST00000484098 COPS2P61201 443 aa8.12□□□□□ -1.11
STRADB-208ENST00000484098 CERKQ8TCT0 537 aa8.12□□□□□ -1.11
STRADB-208ENST00000484098 PKDCCQ504Y2 493 aa8.11□□□□□ -1.11
STRADB-208ENST00000484098 NECTIN2Q92692 538 aa8.11□□□□□ -1.11
STRADB-208ENST00000484098 DCAF8L2P0C7V8 631 aa8.1□□□□□ -1.11
STRADB-208ENST00000484098 PDIA6Q15084 440 aa8.1□□□□□ -1.11
STRADB-208ENST00000484098 NUDT18Q6ZVK8 323 aa8.09□□□□□ -1.11
STRADB-208ENST00000484098 TMUB1Q9BVT8 246 aa8.09□□□□□ -1.11
STRADB-208ENST00000484098 SPDYE16A6NNV3 312 aaPredicted RBP8.06□□□□□ -1.12
STRADB-208ENST00000484098 MYT1Q01538 1121 aa8.06□□□□□ -1.12
STRADB-208ENST00000484098 TRIM67Q6ZTA4 783 aa8.06□□□□□ -1.12
STRADB-208ENST00000484098 GRXCR2A6NFK2 248 aa8.05□□□□□ -1.12
STRADB-208ENST00000484098 ZPR1O75312 459 aa8.05□□□□□ -1.12
STRADB-208ENST00000484098 SLC19A1P41440 591 aa8.05□□□□□ -1.12
STRADB-208ENST00000484098 SLF2Q8IX21 1173 aa8.05□□□□□ -1.12
STRADB-208ENST00000484098 DGAT1O75907 488 aa8.04□□□□□ -1.12
STRADB-208ENST00000484098 SLC4A3P48751 1232 aa8.04□□□□□ -1.12
STRADB-208ENST00000484098 PRIM1P49642 420 aaKnown RBP8.04□□□□□ -1.12
STRADB-208ENST00000484098 SWT1Q5T5J6 900 aaKnown RBP8.04□□□□□ -1.12
STRADB-208ENST00000484098 CDHR5Q9HBB8 845 aa8.04□□□□□ -1.12
STRADB-208ENST00000484098 RBM27Q9P2N5 1060 aaKnown RBP8.03□□□□□ -1.12
STRADB-208ENST00000484098 POTECB2RU33 542 aa8.02□□□□□ -1.13
STRADB-208ENST00000484098 RNF223E7ERA6 249 aa8.02□□□□□ -1.13
STRADB-208ENST00000484098 PCDHB3Q9Y5E6 796 aa8.02□□□□□ -1.13
STRADB-208ENST00000484098 FAM187AA6NFU0 413 aa8.01□□□□□ -1.13
STRADB-208ENST00000484098 PRR14Q9BWN1 585 aa8.01□□□□□ -1.13
STRADB-208ENST00000484098 PRR20EP86478 221 aa8□□□□□ -1.13
STRADB-208ENST00000484098 PRR20CP86479 221 aa8□□□□□ -1.13
STRADB-208ENST00000484098 PRR20DP86480 221 aa8□□□□□ -1.13
STRADB-208ENST00000484098 PRR20BP86481 221 aa8□□□□□ -1.13
STRADB-208ENST00000484098 PRR20AP86496 221 aa8□□□□□ -1.13
STRADB-208ENST00000484098 SPRYD7Q5W111 196 aa8□□□□□ -1.13
STRADB-208ENST00000484098 ZNF598Q86UK7 904 aaKnown RBP8□□□□□ -1.13
STRADB-208ENST00000484098 EMID1Q96A84 441 aaPredicted RBP8□□□□□ -1.13
STRADB-208ENST00000484098 TNFRSF10AO00220 468 aa7.98□□□□□ -1.13
STRADB-208ENST00000484098 TLL1O43897 1013 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms