RNA–Protein interactions for RNA: ENST00000484024.5

RGPD6-210, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 2,179 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-210ENST00000484024 COL17A1Q9UMD9 1497 aaPredicted RBP6.89□□□□□ -1.31
RGPD6-210ENST00000484024 PRKRIP1Q9H875 184 aaPredicted RBP6.89□□□□□ -1.31
RGPD6-210ENST00000484024 MBD5Q9P267 1494 aa6.89□□□□□ -1.31
RGPD6-210ENST00000484024 CCDC141Q6ZP82 1450 aa6.88□□□□□ -1.31
RGPD6-210ENST00000484024 USP47Q96K76 1375 aa6.88□□□□□ -1.31
RGPD6-210ENST00000484024 POLR3GLQ9BT43 218 aa6.88□□□□□ -1.31
RGPD6-210ENST00000484024 GLI2P10070 1586 aa6.87□□□□□ -1.31
RGPD6-210ENST00000484024 ARHGEF5Q12774 1597 aa6.87□□□□□ -1.31
RGPD6-210ENST00000484024 ABCC2Q92887 1545 aa6.87□□□□□ -1.31
RGPD6-210ENST00000484024 CCDC184Q52MB2 194 aa6.87□□□□□ -1.31
RGPD6-210ENST00000484024 RSPH4AQ5TD94 716 aa6.87□□□□□ -1.31
RGPD6-210ENST00000484024 FAM9BQ8IZU0 186 aa6.87□□□□□ -1.31
RGPD6-210ENST00000484024 MRS2Q9HD23 443 aa6.87□□□□□ -1.31
RGPD6-210ENST00000484024 TSHZ2Q9NRE2 1034 aa6.87□□□□□ -1.31
RGPD6-210ENST00000484024 KDM2AQ9Y2K7 1162 aa6.86□□□□□ -1.31
RGPD6-210ENST00000484024 SAMD9LQ8IVG5 1584 aa6.86□□□□□ -1.31
RGPD6-210ENST00000484024 KDM5DQ9BY66 1539 aa6.86□□□□□ -1.31
RGPD6-210ENST00000484024 MAP3K4Q9Y6R4 1608 aa6.86□□□□□ -1.31
RGPD6-210ENST00000484024 PREX2Q70Z35 1606 aa6.85□□□□□ -1.31
RGPD6-210ENST00000484024 CNGB1Q14028 1251 aaPredicted RBP6.85□□□□□ -1.31
RGPD6-210ENST00000484024 DCAF11Q8TEB1 546 aa6.85□□□□□ -1.31
RGPD6-210ENST00000484024 FBXO41Q8TF61 875 aa6.85□□□□□ -1.31
RGPD6-210ENST00000484024 CARD11Q9BXL7 1154 aa6.85□□□□□ -1.31
RGPD6-210ENST00000484024 ARHGAP5Q13017 1502 aa6.85□□□□□ -1.31
RGPD6-210ENST00000484024 UHRF1BP1Q6BDS2 1440 aa6.85□□□□□ -1.31
RGPD6-210ENST00000484024 SYCP2Q9BX26 1530 aa6.84□□□□□ -1.31
RGPD6-210ENST00000484024 ARHGEF12Q9NZN5 1544 aa6.84□□□□□ -1.31
RGPD6-210ENST00000484024 CDC42BPBQ9Y5S2 1711 aa6.84□□□□□ -1.31
RGPD6-210ENST00000484024 RALGAPBQ86X10 1494 aa6.84□□□□□ -1.31
RGPD6-210ENST00000484024 TTC37Q6PGP7 1564 aa6.84□□□□□ -1.31
RGPD6-210ENST00000484024 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.84□□□□□ -1.31
RGPD6-210ENST00000484024 FAM135AQ9P2D6 1515 aa6.84□□□□□ -1.31
RGPD6-210ENST00000484024 ARID4BQ4LE39 1312 aaPredicted RBP6.84□□□□□ -1.31
RGPD6-210ENST00000484024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.84□□□□□ -1.32
RGPD6-210ENST00000484024 KDM5CP41229 1560 aa6.83□□□□□ -1.32
RGPD6-210ENST00000484024 POLR1AO95602 1720 aaPredicted RBP6.83□□□□□ -1.32
RGPD6-210ENST00000484024 ZCCHC11Q5TAX3 1644 aaKnown RBP6.83□□□□□ -1.32
RGPD6-210ENST00000484024 IRX6P78412 446 aaPredicted RBP6.82□□□□□ -1.32
RGPD6-210ENST00000484024 DHX29Q7Z478 1369 aaKnown RBP6.82□□□□□ -1.32
RGPD6-210ENST00000484024 PLEKHH2Q8IVE3 1493 aa6.82□□□□□ -1.32
RGPD6-210ENST00000484024 BCORL1Q5H9F3 1711 aa6.82□□□□□ -1.32
RGPD6-210ENST00000484024 CCDC144AA2RUR9 1427 aa6.82□□□□□ -1.32
RGPD6-210ENST00000484024 ST20-MTHFSA0A0A6YYL1 179 aa6.82□□□□□ -1.32
RGPD6-210ENST00000484024 ROCK2O75116 1388 aaKnown RBP6.82□□□□□ -1.32
RGPD6-210ENST00000484024 ZBED9Q6R2W3 1325 aa6.81□□□□□ -1.32
RGPD6-210ENST00000484024 RGL3Q3MIN7 710 aa6.81□□□□□ -1.32
RGPD6-210ENST00000484024 UHRF1BP1LA0JNW5 1464 aa6.81□□□□□ -1.32
RGPD6-210ENST00000484024 MAST1Q9Y2H9 1570 aa6.81□□□□□ -1.32
RGPD6-210ENST00000484024 SLC4A2P04920 1241 aa6.81□□□□□ -1.32
RGPD6-210ENST00000484024 EFCAB2Q5VUJ9 269 aa6.8□□□□□ -1.32
RGPD6-210ENST00000484024 MYO5CQ9NQX4 1742 aa6.79□□□□□ -1.32
RGPD6-210ENST00000484024 PLCH2O75038 1416 aa6.79□□□□□ -1.32
RGPD6-210ENST00000484024 UNC13BO14795 1591 aa6.79□□□□□ -1.32
RGPD6-210ENST00000484024 DUOX2Q9NRD8 1548 aa6.79□□□□□ -1.32
RGPD6-210ENST00000484024 PRAG1Q86YV5 1406 aa6.79□□□□□ -1.32
RGPD6-210ENST00000484024 PLXNC1O60486 1568 aa6.79□□□□□ -1.32
RGPD6-210ENST00000484024 PLA2R1Q13018 1463 aa6.79□□□□□ -1.32
RGPD6-210ENST00000484024 ERICH6BQ5W0A0 696 aa6.78□□□□□ -1.32
RGPD6-210ENST00000484024 TMC1Q8TDI8 760 aa6.78□□□□□ -1.32
RGPD6-210ENST00000484024 ERBINQ96RT1 1412 aa6.78□□□□□ -1.32
RGPD6-210ENST00000484024 MYT1Q01538 1121 aa6.77□□□□□ -1.33
RGPD6-210ENST00000484024 NBPF1Q3BBV0 1214 aa6.77□□□□□ -1.33
RGPD6-210ENST00000484024 FOXD4L1Q9NU39 408 aa6.77□□□□□ -1.33
RGPD6-210ENST00000484024 WDR7Q9Y4E6 1490 aa6.77□□□□□ -1.33
RGPD6-210ENST00000484024 CD109Q6YHK3 1445 aa6.77□□□□□ -1.33
RGPD6-210ENST00000484024 IQGAP3Q86VI3 1631 aa6.77□□□□□ -1.33
RGPD6-210ENST00000484024 A2MP01023 1474 aa6.76□□□□□ -1.33
RGPD6-210ENST00000484024 LMTK3Q96Q04 1460 aa6.76□□□□□ -1.33
RGPD6-210ENST00000484024 TRAPPC8Q9Y2L5 1435 aa6.76□□□□□ -1.33
RGPD6-210ENST00000484024 RALBP1Q15311 655 aa6.76□□□□□ -1.33
RGPD6-210ENST00000484024 PPP4R2Q9NY27 417 aa6.76□□□□□ -1.33
RGPD6-210ENST00000484024 ABCC1P33527 1531 aa6.76□□□□□ -1.33
RGPD6-210ENST00000484024 SPAG9O60271 1321 aaKnown RBP6.76□□□□□ -1.33
RGPD6-210ENST00000484024 MYBBP1AQ9BQG0 1328 aaKnown RBP6.76□□□□□ -1.33
RGPD6-210ENST00000484024 ZBTB22O15209 634 aa6.75□□□□□ -1.33
RGPD6-210ENST00000484024 PNISRQ8TF01 805 aaKnown RBP6.75□□□□□ -1.33
RGPD6-210ENST00000484024 RBM19Q9Y4C8 960 aaKnown RBP6.75□□□□□ -1.33
RGPD6-210ENST00000484024 TRPM1Q7Z4N2 1603 aa6.75□□□□□ -1.33
RGPD6-210ENST00000484024 KTN1Q86UP2 1357 aaKnown RBP6.75□□□□□ -1.33
RGPD6-210ENST00000484024 PTPRMP28827 1452 aa6.75□□□□□ -1.33
RGPD6-210ENST00000484024 MAGI2Q86UL8 1455 aa6.75□□□□□ -1.33
RGPD6-210ENST00000484024 SENP3-EIF4A1A0A087X0R7 540 aa6.75□□□□□ -1.33
RGPD6-210ENST00000484024 AFAP1Q8N556 730 aa6.75□□□□□ -1.33
RGPD6-210ENST00000484024 ADAMTSL3P82987 1691 aa6.75□□□□□ -1.33
RGPD6-210ENST00000484024 GPRASP1Q5JY77 1395 aa6.75□□□□□ -1.33
RGPD6-210ENST00000484024 SMG6Q86US8 1419 aaKnown RBP6.75□□□□□ -1.33
RGPD6-210ENST00000484024 ATP10AO60312 1499 aa6.74□□□□□ -1.33
RGPD6-210ENST00000484024 NUDCQ9Y266 331 aa6.74□□□□□ -1.33
RGPD6-210ENST00000484024 BRD4O60885 1362 aaPredicted RBP6.74□□□□□ -1.33
RGPD6-210ENST00000484024 MYT1LQ9UL68 1186 aa6.74□□□□□ -1.33
RGPD6-210ENST00000484024 RTEL1-TNFRSF6BF6WH68 1400 aa6.73□□□□□ -1.33
RGPD6-210ENST00000484024 EIF2AK4Q9P2K8 1649 aaKnown RBP6.73□□□□□ -1.33
RGPD6-210ENST00000484024 PRDM15P57071 1507 aaPredicted RBP6.72□□□□□ -1.33
RGPD6-210ENST00000484024 DISP3Q9P2K9 1392 aa6.72□□□□□ -1.33
RGPD6-210ENST00000484024 TMF1P82094 1093 aa6.72□□□□□ -1.33
RGPD6-210ENST00000484024 TESK2Q96S53 571 aa6.72□□□□□ -1.33
RGPD6-210ENST00000484024 E9PCH4 1651 aa6.72□□□□□ -1.33
RGPD6-210ENST00000484024 MADDQ8WXG6 1647 aa6.72□□□□□ -1.33
RGPD6-210ENST00000484024 HSPA2P54652 639 aa6.72□□□□□ -1.33
RGPD6-210ENST00000484024 B4GALNT3Q6L9W6 998 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms