RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 DIP2CQ9Y2E4 1556 aa23.7■■□□□ 1.38
RFTN1-209ENST00000483671 FAM135AQ9P2D6 1515 aa23.69■■□□□ 1.38
RFTN1-209ENST00000483671 BCORL1Q5H9F3 1711 aa23.69■■□□□ 1.38
RFTN1-209ENST00000483671 MYT1LQ9UL68 1186 aa23.67■■□□□ 1.38
RFTN1-209ENST00000483671 TIMELESSQ9UNS1 1208 aa23.67■■□□□ 1.38
RFTN1-209ENST00000483671 ANKRD30BQ9BXX2 1392 aa23.66■■□□□ 1.38
RFTN1-209ENST00000483671 COL17A1Q9UMD9 1497 aaPredicted RBP23.65■■□□□ 1.38
RFTN1-209ENST00000483671 PRDM15P57071 1507 aaPredicted RBP23.64■■□□□ 1.38
RFTN1-209ENST00000483671 VWDEQ8N2E2 1590 aa23.64■■□□□ 1.38
RFTN1-209ENST00000483671 RNF17Q9BXT8 1623 aaKnown RBP23.64■■□□□ 1.37
RFTN1-209ENST00000483671 REREQ9P2R6 1566 aa23.63■■□□□ 1.37
RFTN1-209ENST00000483671 MROH1Q8NDA8 1641 aa23.62■■□□□ 1.37
RFTN1-209ENST00000483671 YEATS2Q9ULM3 1422 aa23.62■■□□□ 1.37
RFTN1-209ENST00000483671 PKD2Q13563 968 aa23.6■■□□□ 1.37
RFTN1-209ENST00000483671 SIN3AQ96ST3 1273 aa23.59■■□□□ 1.37
RFTN1-209ENST00000483671 KIF3BO15066 747 aa23.59■■□□□ 1.37
RFTN1-209ENST00000483671 ATP10AO60312 1499 aa23.58■■□□□ 1.37
RFTN1-209ENST00000483671 KANK1Q14678 1352 aa23.57■■□□□ 1.36
RFTN1-209ENST00000483671 LMTK2Q8IWU2 1503 aa23.56■■□□□ 1.36
RFTN1-209ENST00000483671 ARHGEF40Q8TER5 1519 aa23.56■■□□□ 1.36
RFTN1-209ENST00000483671 RPRD2Q5VT52 1461 aaKnown RBP23.55■■□□□ 1.36
RFTN1-209ENST00000483671 FOXD1Q16676 465 aa23.55■■□□□ 1.36
RFTN1-209ENST00000483671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.55■■□□□ 1.36
RFTN1-209ENST00000483671 AGLP35573 1532 aa23.54■■□□□ 1.36
RFTN1-209ENST00000483671 TRHP20396 242 aaPredicted RBP23.54■■□□□ 1.36
RFTN1-209ENST00000483671 TET3O43151 1660 aa23.53■■□□□ 1.36
RFTN1-209ENST00000483671 NEUROD1Q13562 356 aa23.51■■□□□ 1.35
RFTN1-209ENST00000483671 TONSLQ96HA7 1378 aa23.48■■□□□ 1.35
RFTN1-209ENST00000483671 PLA2R1Q13018 1463 aa23.46■■□□□ 1.35
RFTN1-209ENST00000483671 EFCAB6Q5THR3 1501 aa23.46■■□□□ 1.35
RFTN1-209ENST00000483671 E9PCH4 1651 aa23.45■■□□□ 1.35
RFTN1-209ENST00000483671 PTPRTO14522 1441 aa23.44■■□□□ 1.34
RFTN1-209ENST00000483671 ABCC3O15438 1527 aa23.44■■□□□ 1.34
RFTN1-209ENST00000483671 ZC3H13Q5T200 1668 aaKnown RBP23.43■■□□□ 1.34
RFTN1-209ENST00000483671 PPP6R1Q9UPN7 881 aa23.41■■□□□ 1.34
RFTN1-209ENST00000483671 PPP1R15AO75807 674 aaPredicted RBP23.4■■□□□ 1.34
RFTN1-209ENST00000483671 TRPM2O94759 1503 aa23.4■■□□□ 1.34
RFTN1-209ENST00000483671 CEP152O94986 1710 aa23.39■■□□□ 1.34
RFTN1-209ENST00000483671 GGT6Q6P531 493 aa23.39■■□□□ 1.34
RFTN1-209ENST00000483671 CCDC144AA2RUR9 1427 aa23.38■■□□□ 1.33
RFTN1-209ENST00000483671 ARHGAP31Q2M1Z3 1444 aa23.38■■□□□ 1.33
RFTN1-209ENST00000483671 SPHKAPQ2M3C7 1700 aa23.36■■□□□ 1.33
RFTN1-209ENST00000483671 SIGLEC1Q9BZZ2 1709 aa23.36■■□□□ 1.33
RFTN1-209ENST00000483671 WASHC2CQ9Y4E1 1318 aa23.35■■□□□ 1.33
RFTN1-209ENST00000483671 CAMSAP1Q5T5Y3 1602 aa23.34■■□□□ 1.33
RFTN1-209ENST00000483671 L3MBTL2Q969R5 705 aa23.33■■□□□ 1.33
RFTN1-209ENST00000483671 NPATQ14207 1427 aa23.33■■□□□ 1.33
RFTN1-209ENST00000483671 NEURL4Q96JN8 1562 aa23.31■■□□□ 1.32
RFTN1-209ENST00000483671 CNTLNQ9NXG0 1405 aa23.29■■□□□ 1.32
RFTN1-209ENST00000483671 NOS1P29475 1434 aa23.27■■□□□ 1.32
RFTN1-209ENST00000483671 SPATA31E1Q6ZUB1 1445 aa23.26■■□□□ 1.31
RFTN1-209ENST00000483671 CLTCL1P53675 1640 aa23.25■■□□□ 1.31
RFTN1-209ENST00000483671 UHRF1BP1Q6BDS2 1440 aa23.23■■□□□ 1.31
RFTN1-209ENST00000483671 PIK3C2BO00750 1634 aa23.19■■□□□ 1.3
RFTN1-209ENST00000483671 CLTCQ00610 1675 aaKnown RBP23.18■■□□□ 1.3
RFTN1-209ENST00000483671 SYNMO15061 1565 aa23.17■■□□□ 1.3
RFTN1-209ENST00000483671 STAC3Q96MF2 364 aa23.16■■□□□ 1.3
RFTN1-209ENST00000483671 PREX1Q8TCU6 1659 aa23.16■■□□□ 1.3
RFTN1-209ENST00000483671 ZNF316A6NFI3 1004 aaPredicted RBP23.15■■□□□ 1.3
RFTN1-209ENST00000483671 UGGT1Q9NYU2 1555 aa23.15■■□□□ 1.3
RFTN1-209ENST00000483671 ERVK-7P63135 1459 aa23.15■■□□□ 1.3
RFTN1-209ENST00000483671 NBPF8Q3BBV2 869 aa23.14■■□□□ 1.3
RFTN1-209ENST00000483671 ARID4BQ4LE39 1312 aaPredicted RBP23.14■■□□□ 1.29
RFTN1-209ENST00000483671 ADGRB3O60242 1522 aa23.14■■□□□ 1.29
RFTN1-209ENST00000483671 MROH2AA6NES4 1674 aa23.13■■□□□ 1.29
RFTN1-209ENST00000483671 SPATA31D1Q6ZQQ2 1576 aa23.13■■□□□ 1.29
RFTN1-209ENST00000483671 KIF1BO60333 1816 aa23.13■■□□□ 1.29
RFTN1-209ENST00000483671 SLC52A1Q9NWF4 448 aa23.12■■□□□ 1.29
RFTN1-209ENST00000483671 MLECQ14165 292 aa23.11■■□□□ 1.29
RFTN1-209ENST00000483671 DCAF11Q8TEB1 546 aa23.11■■□□□ 1.29
RFTN1-209ENST00000483671 PRAG1Q86YV5 1406 aa23.1■■□□□ 1.29
RFTN1-209ENST00000483671 RALGAPBQ86X10 1494 aa23.1■■□□□ 1.29
RFTN1-209ENST00000483671 ZMYM3Q14202 1370 aa23.09■■□□□ 1.29
RFTN1-209ENST00000483671 RGL3Q3MIN7 710 aa23.08■■□□□ 1.29
RFTN1-209ENST00000483671 ESF1Q9H501 851 aaKnown RBP23.08■■□□□ 1.29
RFTN1-209ENST00000483671 CFAP65Q6ZU64 1925 aaKnown RBP23.08■■□□□ 1.28
RFTN1-209ENST00000483671 MYOM2P54296 1465 aa23.07■■□□□ 1.28
RFTN1-209ENST00000483671 RPGRIP1LQ68CZ1 1315 aa23.04■■□□□ 1.28
RFTN1-209ENST00000483671 IFT172Q9UG01 1749 aa23.04■■□□□ 1.28
RFTN1-209ENST00000483671 FBXO31Q5XUX0 539 aaPredicted RBP23.03■■□□□ 1.28
RFTN1-209ENST00000483671 MADDQ8WXG6 1647 aa23.02■■□□□ 1.28
RFTN1-209ENST00000483671 IDI1Q13907 227 aa23.02■■□□□ 1.28
RFTN1-209ENST00000483671 KDM2AQ9Y2K7 1162 aa23.02■■□□□ 1.28
RFTN1-209ENST00000483671 NRXN1Q9ULB1 1477 aa23.01■■□□□ 1.27
RFTN1-209ENST00000483671 TRPM1Q7Z4N2 1603 aa23.01■■□□□ 1.27
RFTN1-209ENST00000483671 FER1L4A9Z1Z3 1794 aa23■■□□□ 1.27
RFTN1-209ENST00000483671 GPRASP1Q5JY77 1395 aa23■■□□□ 1.27
RFTN1-209ENST00000483671 TMEM131LA2VDJ0 1609 aa23■■□□□ 1.27
RFTN1-209ENST00000483671 LAMC1P11047 1609 aa22.97■■□□□ 1.27
RFTN1-209ENST00000483671 ZNF326Q5BKZ1 582 aaKnown RBP22.97■■□□□ 1.27
RFTN1-209ENST00000483671 PPLO60437 1756 aa22.97■■□□□ 1.27
RFTN1-209ENST00000483671 EIF4G2P78344 907 aaKnown RBP eCLIP22.96■■□□□ 1.27
RFTN1-209ENST00000483671 KIAA1210Q9ULL0 1709 aa22.95■■□□□ 1.26
RFTN1-209ENST00000483671 TNRQ92752 1358 aa22.95■■□□□ 1.26
RFTN1-209ENST00000483671 ADAMTSL3P82987 1691 aa22.95■■□□□ 1.26
RFTN1-209ENST00000483671 ZFYVE9O95405 1425 aa22.94■■□□□ 1.26
RFTN1-209ENST00000483671 NEXMIFQ5QGS0 1516 aa22.94■■□□□ 1.26
RFTN1-209ENST00000483671 C3P01024 1663 aa22.93■■□□□ 1.26
RFTN1-209ENST00000483671 KDM5AP29375 1690 aaKnown RBP22.93■■□□□ 1.26
RFTN1-209ENST00000483671 ROCK2O75116 1388 aaKnown RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms