RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 KANK1Q14678 1352 aa16.72■□□□□ 0.27
SND1-210ENST00000483503 ZNF518AQ6AHZ1 1483 aa16.72■□□□□ 0.27
SND1-210ENST00000483503 EIF2AK4Q9P2K8 1649 aaKnown RBP16.71■□□□□ 0.27
SND1-210ENST00000483503 ANP32CO43423 234 aa16.71■□□□□ 0.27
SND1-210ENST00000483503 DHX29Q7Z478 1369 aaKnown RBP16.7■□□□□ 0.26
SND1-210ENST00000483503 YTHDC1Q96MU7 727 aaKnown RBP16.69■□□□□ 0.26
SND1-210ENST00000483503 MYT1LQ9UL68 1186 aa16.69■□□□□ 0.26
SND1-210ENST00000483503 DEPDC5O75140 1603 aa16.69■□□□□ 0.26
SND1-210ENST00000483503 RALGAPBQ86X10 1494 aa16.68■□□□□ 0.26
SND1-210ENST00000483503 NEO1Q92859 1461 aa16.68■□□□□ 0.26
SND1-210ENST00000483503 CCER2I3L3R5 266 aa16.68■□□□□ 0.26
SND1-210ENST00000483503 SPATA31E1Q6ZUB1 1445 aa16.67■□□□□ 0.26
SND1-210ENST00000483503 POGZQ7Z3K3 1410 aa16.65■□□□□ 0.26
SND1-210ENST00000483503 PLA2R1Q13018 1463 aa16.65■□□□□ 0.26
SND1-210ENST00000483503 MLH3Q9UHC1 1453 aa16.64■□□□□ 0.25
SND1-210ENST00000483503 TET3O43151 1660 aa16.64■□□□□ 0.25
SND1-210ENST00000483503 ARID4BQ4LE39 1312 aaPredicted RBP16.64■□□□□ 0.25
SND1-210ENST00000483503 WASHC2AQ641Q2 1341 aa16.64■□□□□ 0.25
SND1-210ENST00000483503 KDM5CP41229 1560 aa16.64■□□□□ 0.25
SND1-210ENST00000483503 CCDC7Q96M83 1385 aa16.64■□□□□ 0.25
SND1-210ENST00000483503 POLR1AO95602 1720 aaPredicted RBP16.63■□□□□ 0.25
SND1-210ENST00000483503 DCAF11Q8TEB1 546 aa16.63■□□□□ 0.25
SND1-210ENST00000483503 GLI2P10070 1586 aa16.63■□□□□ 0.25
SND1-210ENST00000483503 VWDEQ8N2E2 1590 aa16.63■□□□□ 0.25
SND1-210ENST00000483503 KIDINS220Q9ULH0 1771 aa16.62■□□□□ 0.25
SND1-210ENST00000483503 ZNF326Q5BKZ1 582 aaKnown RBP16.62■□□□□ 0.25
SND1-210ENST00000483503 STAC3Q96MF2 364 aa16.62■□□□□ 0.25
SND1-210ENST00000483503 USP47Q96K76 1375 aa16.62■□□□□ 0.25
SND1-210ENST00000483503 PRDM15P57071 1507 aaPredicted RBP16.61■□□□□ 0.25
SND1-210ENST00000483503 RIMBP3CA6NJZ7 1639 aa16.61■□□□□ 0.25
SND1-210ENST00000483503 RIMBP3BA6NNM3 1639 aa16.61■□□□□ 0.25
SND1-210ENST00000483503 RIMBP3Q9UFD9 1639 aa16.61■□□□□ 0.25
SND1-210ENST00000483503 A2MP01023 1474 aa16.61■□□□□ 0.25
SND1-210ENST00000483503 KIF3BO15066 747 aa16.6■□□□□ 0.25
SND1-210ENST00000483503 PTPRTO14522 1441 aa16.6■□□□□ 0.25
SND1-210ENST00000483503 CNTLNQ9NXG0 1405 aa16.6■□□□□ 0.25
SND1-210ENST00000483503 TRPM2O94759 1503 aa16.6■□□□□ 0.25
SND1-210ENST00000483503 HECW2Q9P2P5 1572 aa16.6■□□□□ 0.25
SND1-210ENST00000483503 KDM2AQ9Y2K7 1162 aa16.59■□□□□ 0.25
SND1-210ENST00000483503 E9PCH4 1651 aa16.59■□□□□ 0.25
SND1-210ENST00000483503 CYB5RLQ6IPT4 315 aa16.58■□□□□ 0.24
SND1-210ENST00000483503 CARD11Q9BXL7 1154 aa16.58■□□□□ 0.24
SND1-210ENST00000483503 PRAG1Q86YV5 1406 aa16.58■□□□□ 0.24
SND1-210ENST00000483503 RNF17Q9BXT8 1623 aaKnown RBP16.57■□□□□ 0.24
SND1-210ENST00000483503 MAP3K4Q9Y6R4 1608 aa16.57■□□□□ 0.24
SND1-210ENST00000483503 SPHKAPQ2M3C7 1700 aa16.56■□□□□ 0.24
SND1-210ENST00000483503 LMTK2Q8IWU2 1503 aa16.56■□□□□ 0.24
SND1-210ENST00000483503 NEURL4Q96JN8 1562 aa16.55■□□□□ 0.24
SND1-210ENST00000483503 ROCK2O75116 1388 aaKnown RBP16.55■□□□□ 0.24
SND1-210ENST00000483503 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
SND1-210ENST00000483503 BCORL1Q5H9F3 1711 aa16.55■□□□□ 0.24
SND1-210ENST00000483503 LAMC1P11047 1609 aa16.55■□□□□ 0.24
SND1-210ENST00000483503 KIF7Q2M1P5 1343 aa16.54■□□□□ 0.24
SND1-210ENST00000483503 TRPM1Q7Z4N2 1603 aa16.54■□□□□ 0.24
SND1-210ENST00000483503 MROH1Q8NDA8 1641 aa16.54■□□□□ 0.24
SND1-210ENST00000483503 GPRASP1Q5JY77 1395 aa16.53■□□□□ 0.24
SND1-210ENST00000483503 RGL3Q3MIN7 710 aa16.53■□□□□ 0.24
SND1-210ENST00000483503 CEP152O94986 1710 aa16.53■□□□□ 0.24
SND1-210ENST00000483503 EFCAB6Q5THR3 1501 aa16.51■□□□□ 0.23
SND1-210ENST00000483503 C11orf95C9JLR9 678 aaPredicted RBP16.51■□□□□ 0.23
SND1-210ENST00000483503 CLTCL1P53675 1640 aa16.48■□□□□ 0.23
SND1-210ENST00000483503 ABCA6Q8N139 1617 aa16.48■□□□□ 0.23
SND1-210ENST00000483503 FRMPD1Q5SYB0 1578 aa16.48■□□□□ 0.23
SND1-210ENST00000483503 RICTORQ6R327 1708 aa16.48■□□□□ 0.23
SND1-210ENST00000483503 DIP2BQ9P265 1576 aa16.47■□□□□ 0.23
SND1-210ENST00000483503 GTF3C3Q9Y5Q9 886 aa16.47■□□□□ 0.23
SND1-210ENST00000483503 FAM69CQ0P6D2 419 aa16.46■□□□□ 0.23
SND1-210ENST00000483503 DIP2CQ9Y2E4 1556 aa16.46■□□□□ 0.23
SND1-210ENST00000483503 PPRC1Q5VV67 1664 aaKnown RBP16.45■□□□□ 0.22
SND1-210ENST00000483503 ST20-MTHFSA0A0A6YYL1 179 aa16.44■□□□□ 0.22
SND1-210ENST00000483503 RAPGEF3O95398 923 aa16.44■□□□□ 0.22
SND1-210ENST00000483503 KIF1BO60333 1816 aa16.43■□□□□ 0.22
SND1-210ENST00000483503 ZMYM4Q5VZL5 1548 aa16.43■□□□□ 0.22
SND1-210ENST00000483503 MADDQ8WXG6 1647 aa16.42■□□□□ 0.22
SND1-210ENST00000483503 PRKRIP1Q9H875 184 aaPredicted RBP16.42■□□□□ 0.22
SND1-210ENST00000483503 ABCC3O15438 1527 aa16.41■□□□□ 0.22
SND1-210ENST00000483503 GGT6Q6P531 493 aa16.41■□□□□ 0.22
SND1-210ENST00000483503 WASHC2CQ9Y4E1 1318 aa16.41■□□□□ 0.22
SND1-210ENST00000483503 MYOM2P54296 1465 aa16.41■□□□□ 0.22
SND1-210ENST00000483503 ZC3H13Q5T200 1668 aaKnown RBP16.4■□□□□ 0.22
SND1-210ENST00000483503 KIAA1210Q9ULL0 1709 aa16.4■□□□□ 0.22
SND1-210ENST00000483503 NBPF1Q3BBV0 1214 aa16.4■□□□□ 0.22
SND1-210ENST00000483503 ARHGAP31Q2M1Z3 1444 aa16.38■□□□□ 0.21
SND1-210ENST00000483503 SLC24A1O60721 1099 aa16.38■□□□□ 0.21
SND1-210ENST00000483503 POLR3GLQ9BT43 218 aa16.38■□□□□ 0.21
SND1-210ENST00000483503 KTN1Q86UP2 1357 aaKnown RBP16.38■□□□□ 0.21
SND1-210ENST00000483503 NPATQ14207 1427 aa16.37■□□□□ 0.21
SND1-210ENST00000483503 RPGRIP1LQ68CZ1 1315 aa16.37■□□□□ 0.21
SND1-210ENST00000483503 CAMSAP1Q5T5Y3 1602 aa16.37■□□□□ 0.21
SND1-210ENST00000483503 TMF1P82094 1093 aa16.36■□□□□ 0.21
SND1-210ENST00000483503 EIF3AQ14152 1382 aaKnown RBP16.36■□□□□ 0.21
SND1-210ENST00000483503 COL17A1Q9UMD9 1497 aaPredicted RBP16.35■□□□□ 0.21
SND1-210ENST00000483503 REREQ9P2R6 1566 aa16.35■□□□□ 0.21
SND1-210ENST00000483503 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
SND1-210ENST00000483503 SCAF11Q99590 1463 aaKnown RBP16.35■□□□□ 0.21
SND1-210ENST00000483503 ADGRB3O60242 1522 aa16.35■□□□□ 0.21
SND1-210ENST00000483503 CDCA8Q53HL2 280 aa16.34■□□□□ 0.21
SND1-210ENST00000483503 YEATS2Q9ULM3 1422 aa16.34■□□□□ 0.21
SND1-210ENST00000483503 IQGAP1P46940 1657 aa16.34■□□□□ 0.21
SND1-210ENST00000483503 NOS1P29475 1434 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms