RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 FANCAO15360 1455 aa9.71□□□□□ -0.86
CSDE1-207ENST00000483407 VGFO15240 615 aaPredicted RBP9.7□□□□□ -0.86
CSDE1-207ENST00000483407 ZNF579Q8NAF0 562 aaKnown RBP9.7□□□□□ -0.86
CSDE1-207ENST00000483407 UBTFP17480 764 aaKnown RBP9.69□□□□□ -0.86
CSDE1-207ENST00000483407 ADAMTSL3P82987 1691 aa9.69□□□□□ -0.86
CSDE1-207ENST00000483407 FRMPD1Q5SYB0 1578 aa9.69□□□□□ -0.86
CSDE1-207ENST00000483407 POGZQ7Z3K3 1410 aa9.69□□□□□ -0.86
CSDE1-207ENST00000483407 SGIP1Q9BQI5 828 aa9.69□□□□□ -0.86
CSDE1-207ENST00000483407 NKX1-1Q15270 411 aaPredicted RBP9.68□□□□□ -0.86
CSDE1-207ENST00000483407 ATP1B4Q9UN42 357 aaPredicted RBP9.68□□□□□ -0.86
CSDE1-207ENST00000483407 CDK11AQ9UQ88 783 aaPredicted RBP9.68□□□□□ -0.86
CSDE1-207ENST00000483407 CFAP74Q9C0B2 1584 aa9.67□□□□□ -0.86
CSDE1-207ENST00000483407 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.67□□□□□ -0.86
CSDE1-207ENST00000483407 ARHGEF40Q8TER5 1519 aa9.67□□□□□ -0.86
CSDE1-207ENST00000483407 BCORL1Q5H9F3 1711 aa9.67□□□□□ -0.86
CSDE1-207ENST00000483407 MAGI2Q86UL8 1455 aa9.66□□□□□ -0.86
CSDE1-207ENST00000483407 FMN1Q68DA7 1419 aa9.66□□□□□ -0.86
CSDE1-207ENST00000483407 MADDQ8WXG6 1647 aa9.65□□□□□ -0.86
CSDE1-207ENST00000483407 STK25O00506 426 aa9.65□□□□□ -0.86
CSDE1-207ENST00000483407 EFCAB2Q5VUJ9 269 aa9.65□□□□□ -0.86
CSDE1-207ENST00000483407 PCF11O94913 1555 aaKnown RBP9.65□□□□□ -0.86
CSDE1-207ENST00000483407 CDK13Q14004 1512 aaKnown RBP9.65□□□□□ -0.86
CSDE1-207ENST00000483407 ZFYVE16Q7Z3T8 1539 aa9.65□□□□□ -0.86
CSDE1-207ENST00000483407 PLCH2O75038 1416 aa9.65□□□□□ -0.87
CSDE1-207ENST00000483407 SCAPERQ9BY12 1400 aa9.65□□□□□ -0.87
CSDE1-207ENST00000483407 TTC37Q6PGP7 1564 aa9.64□□□□□ -0.87
CSDE1-207ENST00000483407 GTPBP6O43824 516 aaPredicted RBP9.64□□□□□ -0.87
CSDE1-207ENST00000483407 PYGBP11216 843 aa9.64□□□□□ -0.87
CSDE1-207ENST00000483407 MLECQ14165 292 aa9.64□□□□□ -0.87
CSDE1-207ENST00000483407 ZMYM4Q5VZL5 1548 aa9.64□□□□□ -0.87
CSDE1-207ENST00000483407 YEATS2Q9ULM3 1422 aa9.64□□□□□ -0.87
CSDE1-207ENST00000483407 RICTORQ6R327 1708 aa9.62□□□□□ -0.87
CSDE1-207ENST00000483407 POTEB2H3BUK9 544 aa9.62□□□□□ -0.87
CSDE1-207ENST00000483407 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.61□□□□□ -0.87
CSDE1-207ENST00000483407 HSPA2P54652 639 aa9.61□□□□□ -0.87
CSDE1-207ENST00000483407 ZFP91Q96JP5 570 aaPredicted RBP9.61□□□□□ -0.87
CSDE1-207ENST00000483407 CLIP1P30622 1438 aa9.61□□□□□ -0.87
CSDE1-207ENST00000483407 HECW1Q76N89 1606 aa9.6□□□□□ -0.87
CSDE1-207ENST00000483407 ARHGAP35Q9NRY4 1499 aa9.6□□□□□ -0.87
CSDE1-207ENST00000483407 C9orf84Q5VXU9 1444 aa9.6□□□□□ -0.87
CSDE1-207ENST00000483407 ZRANB1Q9UGI0 708 aa9.6□□□□□ -0.87
CSDE1-207ENST00000483407 MYT1LQ9UL68 1186 aa9.6□□□□□ -0.87
CSDE1-207ENST00000483407 RIMS1Q86UR5 1692 aaKnown RBP9.6□□□□□ -0.87
CSDE1-207ENST00000483407 ATP10AO60312 1499 aa9.59□□□□□ -0.87
CSDE1-207ENST00000483407 TROQ12816 1431 aaPredicted RBP9.59□□□□□ -0.87
CSDE1-207ENST00000483407 BCL11BQ9C0K0 894 aaPredicted RBP9.59□□□□□ -0.87
CSDE1-207ENST00000483407 STK24Q9Y6E0 443 aa9.58□□□□□ -0.88
CSDE1-207ENST00000483407 ZNF518AQ6AHZ1 1483 aa9.58□□□□□ -0.88
CSDE1-207ENST00000483407 ARHGAP5Q13017 1502 aa9.57□□□□□ -0.88
CSDE1-207ENST00000483407 KIF14Q15058 1648 aa9.57□□□□□ -0.88
CSDE1-207ENST00000483407 AFAP1Q8N556 730 aa9.57□□□□□ -0.88
CSDE1-207ENST00000483407 DISP3Q9P2K9 1392 aa9.56□□□□□ -0.88
CSDE1-207ENST00000483407 RYDENQ9NUL5 291 aaKnown RBP9.56□□□□□ -0.88
CSDE1-207ENST00000483407 PRKCSHP14314 528 aaPredicted RBP9.55□□□□□ -0.88
CSDE1-207ENST00000483407 ESF1Q9H501 851 aaKnown RBP9.55□□□□□ -0.88
CSDE1-207ENST00000483407 ARHGEF12Q9NZN5 1544 aa9.55□□□□□ -0.88
CSDE1-207ENST00000483407 MYO5CQ9NQX4 1742 aa9.54□□□□□ -0.88
CSDE1-207ENST00000483407 GALR2O43603 387 aaPredicted RBP9.54□□□□□ -0.88
CSDE1-207ENST00000483407 CEBPAP49715 358 aaPredicted RBP9.54□□□□□ -0.88
CSDE1-207ENST00000483407 ZNF467Q7Z7K2 595 aaPredicted RBP9.54□□□□□ -0.88
CSDE1-207ENST00000483407 CERKQ8TCT0 537 aa9.54□□□□□ -0.88
CSDE1-207ENST00000483407 TSPYL2Q9H2G4 693 aaPredicted RBP9.54□□□□□ -0.88
CSDE1-207ENST00000483407 CCDC18Q5T9S5 1454 aa9.53□□□□□ -0.88
CSDE1-207ENST00000483407 MAMSTRQ6ZN01 415 aa9.53□□□□□ -0.88
CSDE1-207ENST00000483407 SIGLEC1Q9BZZ2 1709 aa9.53□□□□□ -0.88
CSDE1-207ENST00000483407 FER1L4A9Z1Z3 1794 aa9.52□□□□□ -0.88
CSDE1-207ENST00000483407 KDM5CP41229 1560 aa9.52□□□□□ -0.89
CSDE1-207ENST00000483407 UHRF1BP1Q6BDS2 1440 aa9.52□□□□□ -0.89
CSDE1-207ENST00000483407 CASKIN1Q8WXD9 1431 aa9.52□□□□□ -0.89
CSDE1-207ENST00000483407 MLH3Q9UHC1 1453 aa9.52□□□□□ -0.89
CSDE1-207ENST00000483407 TRAPPC8Q9Y2L5 1435 aa9.5□□□□□ -0.89
CSDE1-207ENST00000483407 CCDC61Q9Y6R9 512 aa9.5□□□□□ -0.89
CSDE1-207ENST00000483407 REREQ9P2R6 1566 aa9.5□□□□□ -0.89
CSDE1-207ENST00000483407 ZNF777Q9ULD5 760 aaPredicted RBP9.49□□□□□ -0.89
CSDE1-207ENST00000483407 DIP2CQ9Y2E4 1556 aa9.49□□□□□ -0.89
CSDE1-207ENST00000483407 ABCC1P33527 1531 aa9.48□□□□□ -0.89
CSDE1-207ENST00000483407 AGLP35573 1532 aa9.48□□□□□ -0.89
CSDE1-207ENST00000483407 PDAP1Q13442 181 aaKnown RBP9.48□□□□□ -0.89
CSDE1-207ENST00000483407 PREX1Q8TCU6 1659 aa9.48□□□□□ -0.89
CSDE1-207ENST00000483407 CNTLNQ9NXG0 1405 aa9.48□□□□□ -0.89
CSDE1-207ENST00000483407 FYCO1Q9BQS8 1478 aa9.47□□□□□ -0.89
CSDE1-207ENST00000483407 PREX2Q70Z35 1606 aa9.47□□□□□ -0.89
CSDE1-207ENST00000483407 TPRNQ4KMQ1 711 aa9.47□□□□□ -0.89
CSDE1-207ENST00000483407 SPAG9O60271 1321 aaKnown RBP9.47□□□□□ -0.89
CSDE1-207ENST00000483407 ABCA6Q8N139 1617 aa9.45□□□□□ -0.9
CSDE1-207ENST00000483407 PAK3O75914 559 aaPredicted RBP9.45□□□□□ -0.9
CSDE1-207ENST00000483407 C7P10643 843 aa9.45□□□□□ -0.9
CSDE1-207ENST00000483407 NBR1Q14596 966 aa9.45□□□□□ -0.9
CSDE1-207ENST00000483407 CFDP1Q9UEE9 299 aaPredicted RBP9.45□□□□□ -0.9
CSDE1-207ENST00000483407 PCDHB8Q9UN66 801 aa9.45□□□□□ -0.9
CSDE1-207ENST00000483407 PCDHB13Q9Y5F0 798 aa9.45□□□□□ -0.9
CSDE1-207ENST00000483407 PTPRTO14522 1441 aa9.45□□□□□ -0.9
CSDE1-207ENST00000483407 CDC42BPBQ9Y5S2 1711 aa9.45□□□□□ -0.9
CSDE1-207ENST00000483407 HNRNPMP52272 730 aaKnown RBP eCLIP9.44□□□□□ -0.9
CSDE1-207ENST00000483407 CCNB3Q8WWL7 1395 aa9.44□□□□□ -0.9
CSDE1-207ENST00000483407 PLEKHH2Q8IVE3 1493 aa9.44□□□□□ -0.9
CSDE1-207ENST00000483407 LRRIQ1Q96JM4 1722 aa9.44□□□□□ -0.9
CSDE1-207ENST00000483407 GPATCH8Q9UKJ3 1502 aaKnown RBP9.43□□□□□ -0.9
CSDE1-207ENST00000483407 KIAA1107Q9UPP5 1409 aa9.43□□□□□ -0.9
CSDE1-207ENST00000483407 MTUS2Q5JR59 1369 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms