RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 IQSEC2Q5JU85 1478 aa22.24■■□□□ 1.15
VARS-226ENST00000483275 FBXO31Q5XUX0 539 aaPredicted RBP22.24■■□□□ 1.15
VARS-226ENST00000483275 LOC105371045A0A1W2PR82 267 aa22.23■■□□□ 1.15
VARS-226ENST00000483275 VPS8Q8N3P4 1428 aa22.23■■□□□ 1.15
VARS-226ENST00000483275 LRRC9Q6ZRR7 1453 aa22.22■■□□□ 1.15
VARS-226ENST00000483275 NEURL4Q96JN8 1562 aa22.22■■□□□ 1.15
VARS-226ENST00000483275 TNRQ92752 1358 aa22.22■■□□□ 1.15
VARS-226ENST00000483275 PZPP20742 1482 aa22.22■■□□□ 1.15
VARS-226ENST00000483275 ILDR2Q71H61 639 aa22.2■■□□□ 1.14
VARS-226ENST00000483275 PKD2Q13563 968 aa22.19■■□□□ 1.14
VARS-226ENST00000483275 PPP6R1Q9UPN7 881 aa22.19■■□□□ 1.14
VARS-226ENST00000483275 RNF17Q9BXT8 1623 aaKnown RBP22.18■■□□□ 1.14
VARS-226ENST00000483275 FAM135AQ9P2D6 1515 aa22.16■■□□□ 1.14
VARS-226ENST00000483275 WASHC2CQ9Y4E1 1318 aa22.16■■□□□ 1.14
VARS-226ENST00000483275 CEP152O94986 1710 aa22.15■■□□□ 1.14
VARS-226ENST00000483275 KANK4Q5T7N3 995 aaPredicted RBP22.15■■□□□ 1.14
VARS-226ENST00000483275 MAST1Q9Y2H9 1570 aa22.15■■□□□ 1.14
VARS-226ENST00000483275 UBAP1LF5GYI3 381 aa22.14■■□□□ 1.13
VARS-226ENST00000483275 ABCC3O15438 1527 aa22.14■■□□□ 1.13
VARS-226ENST00000483275 CFAP65Q6ZU64 1925 aaKnown RBP22.14■■□□□ 1.13
VARS-226ENST00000483275 MROH1Q8NDA8 1641 aa22.13■■□□□ 1.13
VARS-226ENST00000483275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.12■■□□□ 1.13
VARS-226ENST00000483275 ZC3H13Q5T200 1668 aaKnown RBP22.11■■□□□ 1.13
VARS-226ENST00000483275 EIF2AK4Q9P2K8 1649 aaKnown RBP22.1■■□□□ 1.13
VARS-226ENST00000483275 TSPY4P0CV99 314 aa22.1■■□□□ 1.13
VARS-226ENST00000483275 TSPY10P0CW01 314 aa22.1■■□□□ 1.13
VARS-226ENST00000483275 RSPH4AQ5TD94 716 aa22.1■■□□□ 1.13
VARS-226ENST00000483275 UGGT1Q9NYU2 1555 aa22.1■■□□□ 1.13
VARS-226ENST00000483275 MYOM3Q5VTT5 1437 aa22.09■■□□□ 1.13
VARS-226ENST00000483275 CROCC2H7BZ55 1655 aa22.09■■□□□ 1.13
VARS-226ENST00000483275 MIA2Q96PC5 1412 aa22.08■■□□□ 1.13
VARS-226ENST00000483275 NLRP1Q9C000 1473 aa22.08■■□□□ 1.12
VARS-226ENST00000483275 VWDEQ8N2E2 1590 aa22.08■■□□□ 1.12
VARS-226ENST00000483275 IQGAP1P46940 1657 aa22.06■■□□□ 1.12
VARS-226ENST00000483275 MAP3K1Q13233 1512 aa22.06■■□□□ 1.12
VARS-226ENST00000483275 SHANK2Q9UPX8 1470 aa22.05■■□□□ 1.12
VARS-226ENST00000483275 DEPDC5O75140 1603 aa22.05■■□□□ 1.12
VARS-226ENST00000483275 ERVK-7P63135 1459 aa22.04■■□□□ 1.12
VARS-226ENST00000483275 STRCP1A6NGW2 1772 aa22.04■■□□□ 1.12
VARS-226ENST00000483275 SCAF1Q9H7N4 1312 aaKnown RBP22.04■■□□□ 1.12
VARS-226ENST00000483275 CPS1P31327 1500 aa22.03■■□□□ 1.12
VARS-226ENST00000483275 NPHP4O75161 1426 aaPredicted RBP22.02■■□□□ 1.12
VARS-226ENST00000483275 PTPN23Q9H3S7 1636 aa22.02■■□□□ 1.11
VARS-226ENST00000483275 UBR1Q8IWV7 1749 aa22.01■■□□□ 1.11
VARS-226ENST00000483275 PIP4K2BP78356 416 aa22.01■■□□□ 1.11
VARS-226ENST00000483275 DUOX2Q9NRD8 1548 aa22.01■■□□□ 1.11
VARS-226ENST00000483275 ANKLE2Q86XL3 938 aa22■■□□□ 1.11
VARS-226ENST00000483275 THEMISQ8N1K5 641 aaPredicted RBP21.99■■□□□ 1.11
VARS-226ENST00000483275 MED14O60244 1454 aa21.98■■□□□ 1.11
VARS-226ENST00000483275 PRDM15P57071 1507 aaPredicted RBP21.97■■□□□ 1.11
VARS-226ENST00000483275 SOCS7O14512 581 aa21.97■■□□□ 1.11
VARS-226ENST00000483275 ALKQ9UM73 1620 aa21.97■■□□□ 1.11
VARS-226ENST00000483275 KIF15Q9NS87 1388 aa21.97■■□□□ 1.11
VARS-226ENST00000483275 ABCC5O15440 1437 aa21.96■■□□□ 1.11
VARS-226ENST00000483275 HSPA1LP34931 641 aa21.94■■□□□ 1.1
VARS-226ENST00000483275 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
VARS-226ENST00000483275 MED1Q15648 1581 aaPredicted RBP21.92■■□□□ 1.1
VARS-226ENST00000483275 DAPK1P53355 1430 aa21.91■■□□□ 1.1
VARS-226ENST00000483275 PIK3C2BO00750 1634 aa21.91■■□□□ 1.1
VARS-226ENST00000483275 ERBINQ96RT1 1412 aa21.9■■□□□ 1.1
VARS-226ENST00000483275 SENP3Q9H4L4 574 aaPredicted RBP21.9■■□□□ 1.1
VARS-226ENST00000483275 SYNMO15061 1565 aa21.9■■□□□ 1.1
VARS-226ENST00000483275 FGD6Q6ZV73 1430 aa21.89■■□□□ 1.1
VARS-226ENST00000483275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.89■■□□□ 1.09
VARS-226ENST00000483275 LRRC7Q96NW7 1537 aa21.89■■□□□ 1.09
VARS-226ENST00000483275 SCAF11Q99590 1463 aaKnown RBP21.88■■□□□ 1.09
VARS-226ENST00000483275 TOM1O60784 492 aa21.87■■□□□ 1.09
VARS-226ENST00000483275 XIRP1Q702N8 1843 aaKnown RBP21.86■■□□□ 1.09
VARS-226ENST00000483275 CHIC2Q9UKJ5 165 aa21.86■■□□□ 1.09
VARS-226ENST00000483275 ARHGAP23Q9P227 1491 aa21.84■■□□□ 1.09
VARS-226ENST00000483275 LTKP29376 864 aa21.84■■□□□ 1.09
VARS-226ENST00000483275 APLP2Q06481 763 aa21.84■■□□□ 1.09
VARS-226ENST00000483275 SLIT1O75093 1534 aa21.84■■□□□ 1.09
VARS-226ENST00000483275 ARHGAP31Q2M1Z3 1444 aa21.83■■□□□ 1.09
VARS-226ENST00000483275 TXNDC2Q86VQ3 553 aa21.78■■□□□ 1.08
VARS-226ENST00000483275 EFCAB6Q5THR3 1501 aa21.78■■□□□ 1.08
VARS-226ENST00000483275 KANK1Q14678 1352 aa21.77■■□□□ 1.08
VARS-226ENST00000483275 ANKRD30AQ9BXX3 1397 aa21.77■■□□□ 1.08
VARS-226ENST00000483275 LMTK2Q8IWU2 1503 aa21.76■■□□□ 1.07
VARS-226ENST00000483275 MYO5BQ9ULV0 1848 aa21.76■■□□□ 1.07
VARS-226ENST00000483275 KDM5AP29375 1690 aaKnown RBP21.75■■□□□ 1.07
VARS-226ENST00000483275 TMEM2Q9UHN6 1383 aa21.74■■□□□ 1.07
VARS-226ENST00000483275 ADGRB3O60242 1522 aa21.73■■□□□ 1.07
VARS-226ENST00000483275 STAG3Q9UJ98 1225 aa21.72■■□□□ 1.07
VARS-226ENST00000483275 ADGRL2O95490 1459 aa21.71■■□□□ 1.07
VARS-226ENST00000483275 FAM50AQ14320 339 aaKnown RBP21.71■■□□□ 1.07
VARS-226ENST00000483275 EID1Q9Y6B2 187 aa21.71■■□□□ 1.07
VARS-226ENST00000483275 IDI1Q13907 227 aa21.7■■□□□ 1.06
VARS-226ENST00000483275 GCC2Q8IWJ2 1684 aa21.69■■□□□ 1.06
VARS-226ENST00000483275 NOS1P29475 1434 aa21.68■■□□□ 1.06
VARS-226ENST00000483275 TET3O43151 1660 aa21.66■■□□□ 1.06
VARS-226ENST00000483275 RBM33Q96EV2 1170 aaKnown RBP21.66■■□□□ 1.06
VARS-226ENST00000483275 SLC26A8Q96RN1 970 aa21.66■■□□□ 1.06
VARS-226ENST00000483275 PHF23Q9BUL5 403 aaPredicted RBP21.66■■□□□ 1.06
VARS-226ENST00000483275 ANKRD50Q9ULJ7 1429 aa21.64■■□□□ 1.06
VARS-226ENST00000483275 TMEM94Q12767 1356 aa21.63■■□□□ 1.05
VARS-226ENST00000483275 UNC13BO14795 1591 aa21.62■■□□□ 1.05
VARS-226ENST00000483275 ROBO1Q9Y6N7 1651 aa21.62■■□□□ 1.05
VARS-226ENST00000483275 NWD1Q149M9 1564 aa21.61■■□□□ 1.05
VARS-226ENST00000483275 E9PCH4 1651 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms