RNA–Protein interactions for RNA: ENST00000482726.5

PCGF3-210, Transcript of polycomb group ring finger 3, human

TSL 4

Gene PCGF3, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCGF3-210	ENST00000482726	KDM5D	Q9BY66	1539 aa		33.22	■■■□□ 2.91
PCGF3-210	ENST00000482726	TSPY4	P0CV99	314 aa		33.2	■■■□□ 2.91
PCGF3-210	ENST00000482726	TSPY10	P0CW01	314 aa		33.2	■■■□□ 2.91
PCGF3-210	ENST00000482726	RNF17	Q9BXT8	1623 aa	Known RBP	33.15	■■■□□ 2.9
PCGF3-210	ENST00000482726	PLA2R1	Q13018	1463 aa		33.13	■■■□□ 2.89
PCGF3-210	ENST00000482726	PZP	P20742	1482 aa		33.12	■■■□□ 2.89
PCGF3-210	ENST00000482726	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.12	■■■□□ 2.89
PCGF3-210	ENST00000482726	CROCC2	H7BZ55	1655 aa		33.1	■■■□□ 2.89
PCGF3-210	ENST00000482726	A2ML1	A8K2U0	1454 aa		33.1	■■■□□ 2.89
PCGF3-210	ENST00000482726	DNMT1	P26358	1616 aa	Known RBP	33.1	■■■□□ 2.89
PCGF3-210	ENST00000482726	LTBP4	Q8N2S1	1624 aa		33.1	■■■□□ 2.89
PCGF3-210	ENST00000482726	TCOF1	Q13428	1488 aa	Known RBP	33.08	■■■□□ 2.89
PCGF3-210	ENST00000482726	PTPN23	Q9H3S7	1636 aa		33.08	■■■□□ 2.89
PCGF3-210	ENST00000482726	WASHC2C	Q9Y4E1	1318 aa		33.07	■■■□□ 2.88
PCGF3-210	ENST00000482726	ZC3H13	Q5T200	1668 aa	Known RBP	33.07	■■■□□ 2.88
PCGF3-210	ENST00000482726	APLP2	Q06481	763 aa		33.06	■■■□□ 2.88
PCGF3-210	ENST00000482726	NCKAP5L	Q9HCH0	1330 aa		33.05	■■■□□ 2.88
PCGF3-210	ENST00000482726	TNR	Q92752	1358 aa		33.05	■■■□□ 2.88
PCGF3-210	ENST00000482726	MROH1	Q8NDA8	1641 aa		33.04	■■■□□ 2.88
PCGF3-210	ENST00000482726	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.04	■■■□□ 2.88
PCGF3-210	ENST00000482726	ABCC3	O15438	1527 aa		33.02	■■■□□ 2.88
PCGF3-210	ENST00000482726	SHANK2	Q9UPX8	1470 aa		33.01	■■■□□ 2.88
PCGF3-210	ENST00000482726	DUOX2	Q9NRD8	1548 aa		33.01	■■■□□ 2.87
PCGF3-210	ENST00000482726	PKD2	Q13563	968 aa		33	■■■□□ 2.87
PCGF3-210	ENST00000482726	POLR1A	O95602	1720 aa	Predicted RBP	32.99	■■■□□ 2.87
PCGF3-210	ENST00000482726	ABCC5	O15440	1437 aa		32.98	■■■□□ 2.87
PCGF3-210	ENST00000482726	CEP152	O94986	1710 aa		32.98	■■■□□ 2.87
PCGF3-210	ENST00000482726	FGD6	Q6ZV73	1430 aa		32.97	■■■□□ 2.87
PCGF3-210	ENST00000482726	IQSEC2	Q5JU85	1478 aa		32.93	■■■□□ 2.86
PCGF3-210	ENST00000482726	NLRP1	Q9C000	1473 aa		32.93	■■■□□ 2.86
PCGF3-210	ENST00000482726	DAPK1	P53355	1430 aa		32.93	■■■□□ 2.86
PCGF3-210	ENST00000482726	KIF15	Q9NS87	1388 aa		32.92	■■■□□ 2.86
PCGF3-210	ENST00000482726	SPATA31D1	Q6ZQQ2	1576 aa		32.92	■■■□□ 2.86
PCGF3-210	ENST00000482726	NEURL4	Q96JN8	1562 aa		32.91	■■■□□ 2.86
PCGF3-210	ENST00000482726	CFAP65	Q6ZU64	1925 aa	Known RBP	32.9	■■■□□ 2.86
PCGF3-210	ENST00000482726	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.9	■■■□□ 2.86
PCGF3-210	ENST00000482726	PRDM15	P57071	1507 aa	Predicted RBP	32.89	■■■□□ 2.86
PCGF3-210	ENST00000482726	ERBIN	Q96RT1	1412 aa		32.88	■■■□□ 2.85
PCGF3-210	ENST00000482726	UGGT1	Q9NYU2	1555 aa		32.87	■■■□□ 2.85
PCGF3-210	ENST00000482726	DEPDC5	O75140	1603 aa		32.86	■■■□□ 2.85
PCGF3-210	ENST00000482726	ERVK-7	P63135	1459 aa		32.86	■■■□□ 2.85
PCGF3-210	ENST00000482726	RRP7BP	Q9NSQ0	103 aa		32.83	■■■□□ 2.85
PCGF3-210	ENST00000482726	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.82	■■■□□ 2.84	6e-7	■■■■■ 74.7
PCGF3-210	ENST00000482726	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.78	■■■□□ 2.84
PCGF3-210	ENST00000482726	ANKRD30A	Q9BXX3	1397 aa		32.75	■■■□□ 2.83
PCGF3-210	ENST00000482726	UBR1	Q8IWV7	1749 aa		32.75	■■■□□ 2.83
PCGF3-210	ENST00000482726	ARHGAP31	Q2M1Z3	1444 aa		32.75	■■■□□ 2.83
PCGF3-210	ENST00000482726	MED14	O60244	1454 aa		32.74	■■■□□ 2.83
PCGF3-210	ENST00000482726	ANKLE2	Q86XL3	938 aa		32.73	■■■□□ 2.83
PCGF3-210	ENST00000482726	CHIC2	Q9UKJ5	165 aa		32.72	■■■□□ 2.83
PCGF3-210	ENST00000482726	IQGAP1	P46940	1657 aa		32.72	■■■□□ 2.83
PCGF3-210	ENST00000482726	ADGRL2	O95490	1459 aa		32.71	■■■□□ 2.83
PCGF3-210	ENST00000482726	VWDE	Q8N2E2	1590 aa		32.7	■■■□□ 2.82
PCGF3-210	ENST00000482726	NPHP4	O75161	1426 aa	Predicted RBP	32.68	■■■□□ 2.82
PCGF3-210	ENST00000482726	CPS1	P31327	1500 aa		32.67	■■■□□ 2.82
PCGF3-210	ENST00000482726	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.66	■■■□□ 2.82	4e-7	■□□□□ 9.5
PCGF3-210	ENST00000482726	LMTK2	Q8IWU2	1503 aa		32.66	■■■□□ 2.82
PCGF3-210	ENST00000482726	KANK1	Q14678	1352 aa		32.65	■■■□□ 2.82
PCGF3-210	ENST00000482726	FAM50A	Q14320	339 aa	Known RBP	32.63	■■■□□ 2.81
PCGF3-210	ENST00000482726	PIK3C2B	O00750	1634 aa		32.61	■■■□□ 2.81
PCGF3-210	ENST00000482726	UBAP1L	F5GYI3	381 aa		32.59	■■■□□ 2.81
PCGF3-210	ENST00000482726	EFCAB6	Q5THR3	1501 aa		32.58	■■■□□ 2.81
PCGF3-210	ENST00000482726	SLIT1	O75093	1534 aa		32.57	■■■□□ 2.8
PCGF3-210	ENST00000482726	ARHGAP23	Q9P227	1491 aa		32.57	■■■□□ 2.8
PCGF3-210	ENST00000482726	STRCP1	A6NGW2	1772 aa		32.57	■■■□□ 2.8
PCGF3-210	ENST00000482726	KDM5A	P29375	1690 aa	Known RBP	32.56	■■■□□ 2.8
PCGF3-210	ENST00000482726	SCAF11	Q99590	1463 aa	Known RBP	32.55	■■■□□ 2.8
PCGF3-210	ENST00000482726	SYNM	O15061	1565 aa		32.54	■■■□□ 2.8
PCGF3-210	ENST00000482726	ANKRD50	Q9ULJ7	1429 aa		32.53	■■■□□ 2.8
PCGF3-210	ENST00000482726	NOS1	P29475	1434 aa		32.48	■■■□□ 2.79
PCGF3-210	ENST00000482726	LTK	P29376	864 aa		32.46	■■■□□ 2.79
PCGF3-210	ENST00000482726	TET3	O43151	1660 aa		32.46	■■■□□ 2.79
PCGF3-210	ENST00000482726	UNC13B	O14795	1591 aa		32.45	■■■□□ 2.79
PCGF3-210	ENST00000482726	DISP3	Q9P2K9	1392 aa		32.44	■■■□□ 2.78
PCGF3-210	ENST00000482726	TMEM2	Q9UHN6	1383 aa		32.44	■■■□□ 2.78
PCGF3-210	ENST00000482726	TXNDC2	Q86VQ3	553 aa		32.43	■■■□□ 2.78
PCGF3-210	ENST00000482726	GCC2	Q8IWJ2	1684 aa		32.43	■■■□□ 2.78
PCGF3-210	ENST00000482726	RPRD2	Q5VT52	1461 aa	Known RBP	32.42	■■■□□ 2.78
PCGF3-210	ENST00000482726	IDI1	Q13907	227 aa		32.42	■■■□□ 2.78
PCGF3-210	ENST00000482726	ADGRB3	O60242	1522 aa		32.41	■■■□□ 2.78
PCGF3-210	ENST00000482726	LRRC7	Q96NW7	1537 aa		32.41	■■■□□ 2.78
PCGF3-210	ENST00000482726	ALK	Q9UM73	1620 aa		32.4	■■■□□ 2.78
PCGF3-210	ENST00000482726	ROCK1	Q13464	1354 aa		32.39	■■■□□ 2.78
PCGF3-210	ENST00000482726	STAG3	Q9UJ98	1225 aa		32.38	■■■□□ 2.77
PCGF3-210	ENST00000482726	EID1	Q9Y6B2	187 aa		32.38	■■■□□ 2.77
PCGF3-210	ENST00000482726	TOM1	O60784	492 aa		32.37	■■■□□ 2.77
PCGF3-210	ENST00000482726	MYO5B	Q9ULV0	1848 aa		32.36	■■■□□ 2.77
PCGF3-210	ENST00000482726	XIRP1	Q702N8	1843 aa	Known RBP	32.33	■■■□□ 2.77
PCGF3-210	ENST00000482726	PIP4K2B	P78356	416 aa		32.33	■■■□□ 2.77
PCGF3-210	ENST00000482726	SCAF1	Q9H7N4	1312 aa	Known RBP	32.32	■■■□□ 2.76
PCGF3-210	ENST00000482726		E9PCH4	1651 aa		32.32	■■■□□ 2.76
PCGF3-210	ENST00000482726	IQGAP3	Q86VI3	1631 aa		32.32	■■■□□ 2.76
PCGF3-210	ENST00000482726	SLC52A1	Q9NWF4	448 aa		32.31	■■■□□ 2.76
PCGF3-210	ENST00000482726	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.3	■■■□□ 2.76
PCGF3-210	ENST00000482726	HSPA1L	P34931	641 aa		32.26	■■■□□ 2.75
PCGF3-210	ENST00000482726	TMEM131L	A2VDJ0	1609 aa		32.26	■■■□□ 2.75
PCGF3-210	ENST00000482726	ILDR2	Q71H61	639 aa		32.24	■■■□□ 2.75
PCGF3-210	ENST00000482726	ITGAE	P38570	1179 aa		32.23	■■■□□ 2.75
PCGF3-210	ENST00000482726	ZFYVE9	O95405	1425 aa		32.2	■■■□□ 2.75
PCGF3-210	ENST00000482726	NWD1	Q149M9	1564 aa		32.16	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms