RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 AFAP1Q8N556 730 aa11.79□□□□□ -0.52
CHD6-209ENST00000482596 CLTCQ00610 1675 aaKnown RBP11.78□□□□□ -0.52
CHD6-209ENST00000482596 MYT1LQ9UL68 1186 aa11.78□□□□□ -0.52
CHD6-209ENST00000482596 LRP6O75581 1613 aa11.78□□□□□ -0.52
CHD6-209ENST00000482596 RXRBP28702 533 aa11.77□□□□□ -0.53
CHD6-209ENST00000482596 ROBO1Q9Y6N7 1651 aa11.77□□□□□ -0.53
CHD6-209ENST00000482596 FAM135BQ49AJ0 1406 aa11.77□□□□□ -0.53
CHD6-209ENST00000482596 A2ML1A8K2U0 1454 aa11.76□□□□□ -0.53
CHD6-209ENST00000482596 NUP153P49790 1475 aaKnown RBP11.76□□□□□ -0.53
CHD6-209ENST00000482596 ZNF518AQ6AHZ1 1483 aa11.76□□□□□ -0.53
CHD6-209ENST00000482596 CDK12Q9NYV4 1490 aaPredicted RBP11.76□□□□□ -0.53
CHD6-209ENST00000482596 ZNF772Q68DY9 489 aaPredicted RBP11.75□□□□□ -0.53
CHD6-209ENST00000482596 PLCH2O75038 1416 aa11.74□□□□□ -0.53
CHD6-209ENST00000482596 PLEKHD1A6NEE1 506 aa11.73□□□□□ -0.53
CHD6-209ENST00000482596 LRP5O75197 1615 aa11.73□□□□□ -0.53
CHD6-209ENST00000482596 CDK13Q14004 1512 aaKnown RBP11.72□□□□□ -0.53
CHD6-209ENST00000482596 RGS12O14924 1447 aa11.72□□□□□ -0.53
CHD6-209ENST00000482596 NPHP4O75161 1426 aaPredicted RBP11.72□□□□□ -0.53
CHD6-209ENST00000482596 IQGAP1P46940 1657 aa11.71□□□□□ -0.53
CHD6-209ENST00000482596 PHLPP1O60346 1717 aa11.71□□□□□ -0.54
CHD6-209ENST00000482596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHD6-209ENST00000482596 ITSN2Q9NZM3 1697 aa11.7□□□□□ -0.54
CHD6-209ENST00000482596 MED14O60244 1454 aa11.7□□□□□ -0.54
CHD6-209ENST00000482596 JCADQ9P266 1359 aa11.69□□□□□ -0.54
CHD6-209ENST00000482596 NUTM2BA6NNL0 878 aaPredicted RBP11.69□□□□□ -0.54
CHD6-209ENST00000482596 NUTM2EB1AL46 878 aaPredicted RBP11.69□□□□□ -0.54
CHD6-209ENST00000482596 YY1P25490 414 aa11.69□□□□□ -0.54
CHD6-209ENST00000482596 MEX3CQ5U5Q3 659 aaKnown RBP11.69□□□□□ -0.54
CHD6-209ENST00000482596 NUTM2DQ5VT03 806 aaPredicted RBP11.69□□□□□ -0.54
CHD6-209ENST00000482596 NUTM2AQ8IVF1 878 aaPredicted RBP11.69□□□□□ -0.54
CHD6-209ENST00000482596 MLH3Q9UHC1 1453 aa11.69□□□□□ -0.54
CHD6-209ENST00000482596 ANKLE2Q86XL3 938 aa11.68□□□□□ -0.54
CHD6-209ENST00000482596 MYO5CQ9NQX4 1742 aa11.68□□□□□ -0.54
CHD6-209ENST00000482596 EP400Q96L91 3159 aa11.68□□□□□ -0.54
CHD6-209ENST00000482596 DEPDC5O75140 1603 aa11.68□□□□□ -0.54
CHD6-209ENST00000482596 ABCC1P33527 1531 aa11.67□□□□□ -0.54
CHD6-209ENST00000482596 EFCAB2Q5VUJ9 269 aa11.67□□□□□ -0.54
CHD6-209ENST00000482596 FAM9AQ8IZU1 332 aaPredicted RBP11.67□□□□□ -0.54
CHD6-209ENST00000482596 ZBTB12Q9Y330 459 aaPredicted RBP11.67□□□□□ -0.54
CHD6-209ENST00000482596 KIDINS220Q9ULH0 1771 aa11.67□□□□□ -0.54
CHD6-209ENST00000482596 ZC3H13Q5T200 1668 aaKnown RBP11.63□□□□□ -0.55
CHD6-209ENST00000482596 SENP3-EIF4A1A0A087X0R7 540 aa11.63□□□□□ -0.55
CHD6-209ENST00000482596 COL16A1Q07092 1604 aaPredicted RBP11.63□□□□□ -0.55
CHD6-209ENST00000482596 ATAD2Q6PL18 1390 aa11.61□□□□□ -0.55
CHD6-209ENST00000482596 SAMD9Q5K651 1589 aa11.6□□□□□ -0.55
CHD6-209ENST00000482596 AFF2P51816 1311 aa11.6□□□□□ -0.55
CHD6-209ENST00000482596 SPATA31A6Q5VVP1 1343 aa11.6□□□□□ -0.55
CHD6-209ENST00000482596 ARHGAP5Q13017 1502 aa11.59□□□□□ -0.55
CHD6-209ENST00000482596 FBXO31Q5XUX0 539 aaPredicted RBP11.58□□□□□ -0.56
CHD6-209ENST00000482596 TNRQ92752 1358 aa11.57□□□□□ -0.56
CHD6-209ENST00000482596 UGGT1Q9NYU2 1555 aa11.57□□□□□ -0.56
CHD6-209ENST00000482596 SHPRHQ149N8 1683 aa11.56□□□□□ -0.56
CHD6-209ENST00000482596 THEMISQ8N1K5 641 aaPredicted RBP11.56□□□□□ -0.56
CHD6-209ENST00000482596 KIF14Q15058 1648 aa11.56□□□□□ -0.56
CHD6-209ENST00000482596 RBM6P78332 1123 aaKnown RBP11.55□□□□□ -0.56
CHD6-209ENST00000482596 GGT6Q6P531 493 aa11.55□□□□□ -0.56
CHD6-209ENST00000482596 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
CHD6-209ENST00000482596 MAP3K1Q13233 1512 aa11.55□□□□□ -0.56
CHD6-209ENST00000482596 TMEM94Q12767 1356 aa11.54□□□□□ -0.56
CHD6-209ENST00000482596 NHSL1Q5SYE7 1610 aa11.54□□□□□ -0.56
CHD6-209ENST00000482596 QTRT2Q9H974 415 aaKnown RBP11.54□□□□□ -0.56
CHD6-209ENST00000482596 CDC42BPBQ9Y5S2 1711 aa11.54□□□□□ -0.56
CHD6-209ENST00000482596 KDM5DQ9BY66 1539 aa11.54□□□□□ -0.56
CHD6-209ENST00000482596 CEP350Q5VT06 3117 aa11.53□□□□□ -0.56
CHD6-209ENST00000482596 FGD6Q6ZV73 1430 aa11.53□□□□□ -0.56
CHD6-209ENST00000482596 LRRC9Q6ZRR7 1453 aa11.53□□□□□ -0.56
CHD6-209ENST00000482596 FAM135AQ9P2D6 1515 aa11.53□□□□□ -0.56
CHD6-209ENST00000482596 ATP7AQ04656 1500 aa11.51□□□□□ -0.57
CHD6-209ENST00000482596 PLXNC1O60486 1568 aa11.51□□□□□ -0.57
CHD6-209ENST00000482596 PSDA5PKW4 1024 aaPredicted RBP11.51□□□□□ -0.57
CHD6-209ENST00000482596 HRCP23327 699 aa11.49□□□□□ -0.57
CHD6-209ENST00000482596 SAMD9LQ8IVG5 1584 aa11.49□□□□□ -0.57
CHD6-209ENST00000482596 DEFB132Q7Z7B7 95 aa11.48□□□□□ -0.57
CHD6-209ENST00000482596 SLAIN2Q9P270 581 aa11.48□□□□□ -0.57
CHD6-209ENST00000482596 NWD1Q149M9 1564 aa11.48□□□□□ -0.57
CHD6-209ENST00000482596 SUPT5HO00267 1087 aaKnown RBP11.47□□□□□ -0.57
CHD6-209ENST00000482596 CCDC125Q86Z20 511 aa11.47□□□□□ -0.57
CHD6-209ENST00000482596 BCL9LQ86UU0 1499 aa11.46□□□□□ -0.57
CHD6-209ENST00000482596 NLRP1Q9C000 1473 aa11.46□□□□□ -0.57
CHD6-209ENST00000482596 C8orf37Q96NL8 207 aa11.46□□□□□ -0.57
CHD6-209ENST00000482596 ADGBQ8N7X0 1667 aa11.46□□□□□ -0.58
CHD6-209ENST00000482596 DIP2AQ14689 1571 aa11.45□□□□□ -0.58
CHD6-209ENST00000482596 PZPP20742 1482 aa11.45□□□□□ -0.58
CHD6-209ENST00000482596 MIA2Q96PC5 1412 aa11.45□□□□□ -0.58
CHD6-209ENST00000482596 TIAM1Q13009 1591 aa11.45□□□□□ -0.58
CHD6-209ENST00000482596 A2MP01023 1474 aa11.44□□□□□ -0.58
CHD6-209ENST00000482596 C1QTNF8P60827 252 aa11.44□□□□□ -0.58
CHD6-209ENST00000482596 MKRN4PQ13434 485 aaPredicted RBP11.44□□□□□ -0.58
CHD6-209ENST00000482596 AHDC1Q5TGY3 1603 aaPredicted RBP11.43□□□□□ -0.58
CHD6-209ENST00000482596 PROSER2Q86WR7 435 aaPredicted RBP11.43□□□□□ -0.58
CHD6-209ENST00000482596 NGLY1Q96IV0 654 aa11.43□□□□□ -0.58
CHD6-209ENST00000482596 LTKP29376 864 aa11.42□□□□□ -0.58
CHD6-209ENST00000482596 RANGAP1P46060 587 aaPredicted RBP11.42□□□□□ -0.58
CHD6-209ENST00000482596 ZNF784Q8NCA9 323 aaPredicted RBP11.42□□□□□ -0.58
CHD6-209ENST00000482596 SCAF11Q99590 1463 aaKnown RBP11.42□□□□□ -0.58
CHD6-209ENST00000482596 PRXQ9BXM0 1461 aa11.42□□□□□ -0.58
CHD6-209ENST00000482596 PREX2Q70Z35 1606 aa11.42□□□□□ -0.58
CHD6-209ENST00000482596 MSH6P52701 1360 aa11.4□□□□□ -0.59
CHD6-209ENST00000482596 PRDM15P57071 1507 aaPredicted RBP11.4□□□□□ -0.59
CHD6-209ENST00000482596 SPAG9O60271 1321 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms