RNA–Protein interactions for RNA: ENST00000482338.5

ERGIC3-214, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-214ENST00000482338 TRIM52Q96A61 297 aa13□□□□□ -0.33
ERGIC3-214ENST00000482338 PRDM15P57071 1507 aaPredicted RBP12.99□□□□□ -0.33
ERGIC3-214ENST00000482338 FAM135AQ9P2D6 1515 aa12.99□□□□□ -0.33
ERGIC3-214ENST00000482338 YEATS2Q9ULM3 1422 aa12.99□□□□□ -0.33
ERGIC3-214ENST00000482338 CLSPNQ9HAW4 1339 aa12.99□□□□□ -0.33
ERGIC3-214ENST00000482338 ACIN1Q9UKV3 1341 aaKnown RBP12.99□□□□□ -0.33
ERGIC3-214ENST00000482338 MYT1LQ9UL68 1186 aa12.99□□□□□ -0.33
ERGIC3-214ENST00000482338 REREQ9P2R6 1566 aa12.98□□□□□ -0.33
ERGIC3-214ENST00000482338 DHX29Q7Z478 1369 aaKnown RBP12.97□□□□□ -0.33
ERGIC3-214ENST00000482338 E9PCH4 1651 aa12.97□□□□□ -0.33
ERGIC3-214ENST00000482338 TET3O43151 1660 aa12.97□□□□□ -0.33
ERGIC3-214ENST00000482338 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
ERGIC3-214ENST00000482338 VWDEQ8N2E2 1590 aa12.97□□□□□ -0.33
ERGIC3-214ENST00000482338 ZEB1P37275 1124 aaPredicted RBP12.96□□□□□ -0.33
ERGIC3-214ENST00000482338 MPHOSPH9Q99550 1183 aa12.95□□□□□ -0.34
ERGIC3-214ENST00000482338 NUP155O75694 1391 aa12.94□□□□□ -0.34
ERGIC3-214ENST00000482338 SPHKAPQ2M3C7 1700 aa12.94□□□□□ -0.34
ERGIC3-214ENST00000482338 ZC3H13Q5T200 1668 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-214ENST00000482338 CAMSAP1Q5T5Y3 1602 aa12.92□□□□□ -0.34
ERGIC3-214ENST00000482338 CFAP65Q6ZU64 1925 aaKnown RBP12.92□□□□□ -0.34
ERGIC3-214ENST00000482338 SLC4A1APQ9BWU0 796 aaKnown RBP12.92□□□□□ -0.34
ERGIC3-214ENST00000482338 ATP10AO60312 1499 aa12.91□□□□□ -0.34
ERGIC3-214ENST00000482338 EFCAB6Q5THR3 1501 aa12.9□□□□□ -0.34
ERGIC3-214ENST00000482338 AGLP35573 1532 aa12.89□□□□□ -0.35
ERGIC3-214ENST00000482338 KIF3BO15066 747 aa12.89□□□□□ -0.35
ERGIC3-214ENST00000482338 FOXD1Q16676 465 aa12.89□□□□□ -0.35
ERGIC3-214ENST00000482338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.89□□□□□ -0.35
ERGIC3-214ENST00000482338 LMTK2Q8IWU2 1503 aa12.88□□□□□ -0.35
ERGIC3-214ENST00000482338 SIN3AQ96ST3 1273 aa12.88□□□□□ -0.35
ERGIC3-214ENST00000482338 CLTCQ00610 1675 aaKnown RBP12.88□□□□□ -0.35
ERGIC3-214ENST00000482338 ANKRD30BQ9BXX2 1392 aa12.87□□□□□ -0.35
ERGIC3-214ENST00000482338 PKD2Q13563 968 aa12.87□□□□□ -0.35
ERGIC3-214ENST00000482338 ABCC3O15438 1527 aa12.87□□□□□ -0.35
ERGIC3-214ENST00000482338 KANK1Q14678 1352 aa12.86□□□□□ -0.35
ERGIC3-214ENST00000482338 RPRD2Q5VT52 1461 aaKnown RBP12.85□□□□□ -0.35
ERGIC3-214ENST00000482338 KIF1BO60333 1816 aa12.84□□□□□ -0.35
ERGIC3-214ENST00000482338 CLTCL1P53675 1640 aa12.84□□□□□ -0.35
ERGIC3-214ENST00000482338 PREX1Q8TCU6 1659 aa12.83□□□□□ -0.35
ERGIC3-214ENST00000482338 TRPM2O94759 1503 aa12.83□□□□□ -0.35
ERGIC3-214ENST00000482338 NEUROD1Q13562 356 aa12.83□□□□□ -0.36
ERGIC3-214ENST00000482338 FER1L4A9Z1Z3 1794 aa12.82□□□□□ -0.36
ERGIC3-214ENST00000482338 PLA2R1Q13018 1463 aa12.82□□□□□ -0.36
ERGIC3-214ENST00000482338 MROH2AA6NES4 1674 aa12.81□□□□□ -0.36
ERGIC3-214ENST00000482338 GGT6Q6P531 493 aa12.81□□□□□ -0.36
ERGIC3-214ENST00000482338 MYO5BQ9ULV0 1848 aa12.79□□□□□ -0.36
ERGIC3-214ENST00000482338 TONSLQ96HA7 1378 aa12.79□□□□□ -0.36
ERGIC3-214ENST00000482338 SYNMO15061 1565 aa12.78□□□□□ -0.36
ERGIC3-214ENST00000482338 PIK3C2BO00750 1634 aa12.78□□□□□ -0.36
ERGIC3-214ENST00000482338 IFT172Q9UG01 1749 aa12.78□□□□□ -0.36
ERGIC3-214ENST00000482338 PTPRTO14522 1441 aa12.78□□□□□ -0.36
ERGIC3-214ENST00000482338 NPATQ14207 1427 aa12.78□□□□□ -0.36
ERGIC3-214ENST00000482338 UGGT1Q9NYU2 1555 aa12.77□□□□□ -0.36
ERGIC3-214ENST00000482338 CCDC144AA2RUR9 1427 aa12.77□□□□□ -0.37
ERGIC3-214ENST00000482338 C3P01024 1663 aa12.75□□□□□ -0.37
ERGIC3-214ENST00000482338 ARHGAP31Q2M1Z3 1444 aa12.75□□□□□ -0.37
ERGIC3-214ENST00000482338 TIMELESSQ9UNS1 1208 aa12.75□□□□□ -0.37
ERGIC3-214ENST00000482338 WASHC2CQ9Y4E1 1318 aa12.75□□□□□ -0.37
ERGIC3-214ENST00000482338 NEURL4Q96JN8 1562 aa12.73□□□□□ -0.37
ERGIC3-214ENST00000482338 PPLO60437 1756 aa12.73□□□□□ -0.37
ERGIC3-214ENST00000482338 NOS1P29475 1434 aa12.72□□□□□ -0.37
ERGIC3-214ENST00000482338 CNTLNQ9NXG0 1405 aa12.71□□□□□ -0.37
ERGIC3-214ENST00000482338 RIMS1Q86UR5 1692 aaKnown RBP12.71□□□□□ -0.37
ERGIC3-214ENST00000482338 MADDQ8WXG6 1647 aa12.71□□□□□ -0.37
ERGIC3-214ENST00000482338 MLECQ14165 292 aa12.71□□□□□ -0.37
ERGIC3-214ENST00000482338 SPATA31D1Q6ZQQ2 1576 aa12.71□□□□□ -0.37
ERGIC3-214ENST00000482338 ADGRB3O60242 1522 aa12.71□□□□□ -0.38
ERGIC3-214ENST00000482338 ADAMTSL3P82987 1691 aa12.7□□□□□ -0.38
ERGIC3-214ENST00000482338 L3MBTL2Q969R5 705 aa12.7□□□□□ -0.38
ERGIC3-214ENST00000482338 PPP6R1Q9UPN7 881 aa12.7□□□□□ -0.38
ERGIC3-214ENST00000482338 ERVK-7P63135 1459 aa12.7□□□□□ -0.38
ERGIC3-214ENST00000482338 SPATA31E1Q6ZUB1 1445 aa12.7□□□□□ -0.38
ERGIC3-214ENST00000482338 TRPM1Q7Z4N2 1603 aa12.7□□□□□ -0.38
ERGIC3-214ENST00000482338 ARID4BQ4LE39 1312 aaPredicted RBP12.69□□□□□ -0.38
ERGIC3-214ENST00000482338 PPP1R15AO75807 674 aaPredicted RBP12.69□□□□□ -0.38
ERGIC3-214ENST00000482338 TMEM131LA2VDJ0 1609 aa12.68□□□□□ -0.38
ERGIC3-214ENST00000482338 KDM5AP29375 1690 aaKnown RBP12.64□□□□□ -0.39
ERGIC3-214ENST00000482338 UHRF1BP1Q6BDS2 1440 aa12.64□□□□□ -0.39
ERGIC3-214ENST00000482338 UBR1Q8IWV7 1749 aa12.64□□□□□ -0.39
ERGIC3-214ENST00000482338 KIAA1210Q9ULL0 1709 aa12.64□□□□□ -0.39
ERGIC3-214ENST00000482338 POLR1AO95602 1720 aaPredicted RBP12.63□□□□□ -0.39
ERGIC3-214ENST00000482338 ZMYM3Q14202 1370 aa12.63□□□□□ -0.39
ERGIC3-214ENST00000482338 NEXMIFQ5QGS0 1516 aa12.62□□□□□ -0.39
ERGIC3-214ENST00000482338 NBPF8Q3BBV2 869 aa12.62□□□□□ -0.39
ERGIC3-214ENST00000482338 RGL3Q3MIN7 710 aa12.62□□□□□ -0.39
ERGIC3-214ENST00000482338 FBXO31Q5XUX0 539 aaPredicted RBP12.62□□□□□ -0.39
ERGIC3-214ENST00000482338 ESF1Q9H501 851 aaKnown RBP12.62□□□□□ -0.39
ERGIC3-214ENST00000482338 LAMC1P11047 1609 aa12.62□□□□□ -0.39
ERGIC3-214ENST00000482338 MYO3AQ8NEV4 1616 aa12.62□□□□□ -0.39
ERGIC3-214ENST00000482338 RALGAPBQ86X10 1494 aa12.61□□□□□ -0.39
ERGIC3-214ENST00000482338 PRAG1Q86YV5 1406 aa12.61□□□□□ -0.39
ERGIC3-214ENST00000482338 MYOM2P54296 1465 aa12.6□□□□□ -0.39
ERGIC3-214ENST00000482338 DCAF11Q8TEB1 546 aa12.6□□□□□ -0.39
ERGIC3-214ENST00000482338 IQGAP1P46940 1657 aa12.59□□□□□ -0.39
ERGIC3-214ENST00000482338 KDM2AQ9Y2K7 1162 aa12.58□□□□□ -0.4
ERGIC3-214ENST00000482338 ZNF142P52746 1687 aaPredicted RBP12.57□□□□□ -0.4
ERGIC3-214ENST00000482338 IDI1Q13907 227 aa12.57□□□□□ -0.4
ERGIC3-214ENST00000482338 ZNF326Q5BKZ1 582 aaKnown RBP12.57□□□□□ -0.4
ERGIC3-214ENST00000482338 SLC52A1Q9NWF4 448 aa12.57□□□□□ -0.4
ERGIC3-214ENST00000482338 NRXN1Q9ULB1 1477 aa12.57□□□□□ -0.4
ERGIC3-214ENST00000482338 CHGAP10645 457 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms