RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 DAPK1P53355 1430 aa30.74■■■□□ 2.51
MSH5-215ENST00000482280 DUOX2Q9NRD8 1548 aa30.74■■■□□ 2.51
MSH5-215ENST00000482280 TCOF1Q13428 1488 aaKnown RBP30.74■■■□□ 2.51
MSH5-215ENST00000482280 FAM50AQ14320 339 aaKnown RBP30.73■■■□□ 2.51
MSH5-215ENST00000482280 RRP7BPQ9NSQ0 103 aa30.73■■■□□ 2.51
MSH5-215ENST00000482280 KIF15Q9NS87 1388 aa30.73■■■□□ 2.51
MSH5-215ENST00000482280 EIF2AK4Q9P2K8 1649 aaKnown RBP30.72■■■□□ 2.51
MSH5-215ENST00000482280 FBXO41Q8TF61 875 aa30.71■■■□□ 2.51
MSH5-215ENST00000482280 MYO3AQ8NEV4 1616 aa30.71■■■□□ 2.51
MSH5-215ENST00000482280 CROCC2H7BZ55 1655 aa30.7■■■□□ 2.5
MSH5-215ENST00000482280 PZPP20742 1482 aa30.7■■■□□ 2.5
MSH5-215ENST00000482280 DNMT1P26358 1616 aaKnown RBP30.69■■■□□ 2.5
MSH5-215ENST00000482280 TNRQ92752 1358 aa30.68■■■□□ 2.5
MSH5-215ENST00000482280 ANKRD30AQ9BXX3 1397 aa30.68■■■□□ 2.5
MSH5-215ENST00000482280 CAMSAP1Q5T5Y3 1602 aa30.68■■■□□ 2.5
MSH5-215ENST00000482280 CEP170BQ9Y4F5 1589 aaPredicted RBP30.67■■■□□ 2.5
MSH5-215ENST00000482280 STRCQ7RTU9 1775 aa30.67■■■□□ 2.5
MSH5-215ENST00000482280 NCOA1Q15788 1441 aa30.67■■■□□ 2.5
MSH5-215ENST00000482280 RNF17Q9BXT8 1623 aaKnown RBP30.67■■■□□ 2.5
MSH5-215ENST00000482280 CHIC2Q9UKJ5 165 aa30.67■■■□□ 2.5
MSH5-215ENST00000482280 PTPRTO14522 1441 aa30.65■■■□□ 2.5
MSH5-215ENST00000482280 ERBINQ96RT1 1412 aa30.65■■■□□ 2.5
MSH5-215ENST00000482280 FBXO31Q5XUX0 539 aaPredicted RBP30.65■■■□□ 2.5
MSH5-215ENST00000482280 ZNF142P52746 1687 aaPredicted RBP30.64■■■□□ 2.5
MSH5-215ENST00000482280 ZC3H13Q5T200 1668 aaKnown RBP30.63■■■□□ 2.49
MSH5-215ENST00000482280 CERKQ8TCT0 537 aa30.62■■■□□ 2.49
MSH5-215ENST00000482280 A2ML1A8K2U0 1454 aa30.62■■■□□ 2.49
MSH5-215ENST00000482280 PKD2Q13563 968 aa30.61■■■□□ 2.49
MSH5-215ENST00000482280 ABCC3O15438 1527 aa30.6■■■□□ 2.49
MSH5-215ENST00000482280 KANK1Q14678 1352 aa30.6■■■□□ 2.49
MSH5-215ENST00000482280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.59■■■□□ 2.491e-6■■■□□ 14.6
MSH5-215ENST00000482280 PLA2R1Q13018 1463 aa30.58■■■□□ 2.49
MSH5-215ENST00000482280 NCKAP5LQ9HCH0 1330 aa30.57■■■□□ 2.48
MSH5-215ENST00000482280 NLRP1Q9C000 1473 aa30.54■■■□□ 2.48
MSH5-215ENST00000482280 THEMISQ8N1K5 641 aaPredicted RBP30.52■■■□□ 2.48
MSH5-215ENST00000482280 MROH1Q8NDA8 1641 aa30.51■■■□□ 2.48
MSH5-215ENST00000482280 PRDM15P57071 1507 aaPredicted RBP30.51■■■□□ 2.47
MSH5-215ENST00000482280 PPARGC1BQ86YN6 1023 aaKnown RBP30.49■■■□□ 2.47
MSH5-215ENST00000482280 ADGRL2O95490 1459 aa30.48■■■□□ 2.47
MSH5-215ENST00000482280 CEP152O94986 1710 aa30.47■■■□□ 2.47
MSH5-215ENST00000482280 ERVK-7P63135 1459 aa30.46■■■□□ 2.47
MSH5-215ENST00000482280 UGGT1Q9NYU2 1555 aa30.45■■■□□ 2.47
MSH5-215ENST00000482280 ANKLE2Q86XL3 938 aa30.45■■■□□ 2.47
MSH5-215ENST00000482280 SPATA31D1Q6ZQQ2 1576 aa30.45■■■□□ 2.46
MSH5-215ENST00000482280 DEPDC5O75140 1603 aa30.42■■■□□ 2.46
MSH5-215ENST00000482280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.41■■■□□ 2.46
MSH5-215ENST00000482280 ARHGAP31Q2M1Z3 1444 aa30.41■■■□□ 2.46
MSH5-215ENST00000482280 ANKRD50Q9ULJ7 1429 aa30.41■■■□□ 2.46
MSH5-215ENST00000482280 ITGAEP38570 1179 aa30.39■■■□□ 2.46
MSH5-215ENST00000482280 STAG3Q9UJ98 1225 aa30.35■■■□□ 2.45
MSH5-215ENST00000482280 ZNF335Q9H4Z2 1342 aaPredicted RBP30.34■■■□□ 2.45
MSH5-215ENST00000482280 POLR1AO95602 1720 aaPredicted RBP30.33■■■□□ 2.45
MSH5-215ENST00000482280 ROCK1Q13464 1354 aa30.33■■■□□ 2.45
MSH5-215ENST00000482280 LMTK2Q8IWU2 1503 aa30.32■■■□□ 2.44
MSH5-215ENST00000482280 LTBP4Q8N2S1 1624 aa30.31■■■□□ 2.44
MSH5-215ENST00000482280 CFAP65Q6ZU64 1925 aaKnown RBP30.3■■■□□ 2.44
MSH5-215ENST00000482280 VWDEQ8N2E2 1590 aa30.28■■■□□ 2.44
MSH5-215ENST00000482280 IQSEC2Q5JU85 1478 aa30.27■■■□□ 2.44
MSH5-215ENST00000482280 NPHP4O75161 1426 aaPredicted RBP30.27■■■□□ 2.44
MSH5-215ENST00000482280 EID1Q9Y6B2 187 aa30.25■■■□□ 2.43
MSH5-215ENST00000482280 NEURL4Q96JN8 1562 aa30.24■■■□□ 2.43
MSH5-215ENST00000482280 EFCAB6Q5THR3 1501 aa30.24■■■□□ 2.43
MSH5-215ENST00000482280 MED14O60244 1454 aa30.21■■■□□ 2.43
MSH5-215ENST00000482280 UBR1Q8IWV7 1749 aa30.21■■■□□ 2.43
MSH5-215ENST00000482280 RPRD2Q5VT52 1461 aaKnown RBP30.19■■■□□ 2.42
MSH5-215ENST00000482280 TXNDC2Q86VQ3 553 aa30.19■■■□□ 2.42
MSH5-215ENST00000482280 SLC52A1Q9NWF4 448 aa30.18■■■□□ 2.42
MSH5-215ENST00000482280 SCAF11Q99590 1463 aaKnown RBP30.18■■■□□ 2.42
MSH5-215ENST00000482280 IDI1Q13907 227 aa30.16■■■□□ 2.42
MSH5-215ENST00000482280 IQGAP1P46940 1657 aa30.16■■■□□ 2.42
MSH5-215ENST00000482280 UNC13BO14795 1591 aa30.15■■■□□ 2.42
MSH5-215ENST00000482280 PIK3C2BO00750 1634 aa30.15■■■□□ 2.42
MSH5-215ENST00000482280 CPS1P31327 1500 aa30.15■■■□□ 2.42
MSH5-215ENST00000482280 NOS1P29475 1434 aa30.14■■■□□ 2.42
MSH5-215ENST00000482280 RRBP1Q9P2E9 1410 aaKnown RBP30.14■■■□□ 2.42
MSH5-215ENST00000482280 TET3O43151 1660 aa30.14■■■□□ 2.41
MSH5-215ENST00000482280 UBAP1LF5GYI3 381 aa30.13■■■□□ 2.41
MSH5-215ENST00000482280 NUP155O75694 1391 aa30.13■■■□□ 2.41
MSH5-215ENST00000482280 SLIT1O75093 1534 aa30.12■■■□□ 2.41
MSH5-215ENST00000482280 TMEM2Q9UHN6 1383 aa30.12■■■□□ 2.41
MSH5-215ENST00000482280 ARHGAP23Q9P227 1491 aa30.11■■■□□ 2.41
MSH5-215ENST00000482280 SYNMO15061 1565 aa30.1■■■□□ 2.41
MSH5-215ENST00000482280 LTKP29376 864 aa30.08■■■□□ 2.41
MSH5-215ENST00000482280 KDM5AP29375 1690 aaKnown RBP30.07■■■□□ 2.41
MSH5-215ENST00000482280 GCC2Q8IWJ2 1684 aa30.07■■■□□ 2.41
MSH5-215ENST00000482280 HDGFP51858 240 aaKnown RBP30.05■■■□□ 2.4
MSH5-215ENST00000482280 ADGRB3O60242 1522 aa30.05■■■□□ 2.4
MSH5-215ENST00000482280 IQGAP3Q86VI3 1631 aa30.04■■■□□ 2.4
MSH5-215ENST00000482280 BCANQ96GW7 911 aa30.04■■■□□ 2.4
MSH5-215ENST00000482280 CHGAP10645 457 aaKnown RBP30.03■■■□□ 2.4
MSH5-215ENST00000482280 TOM1O60784 492 aa30.02■■■□□ 2.4
MSH5-215ENST00000482280 SCAF1Q9H7N4 1312 aaKnown RBP30■■■□□ 2.39
MSH5-215ENST00000482280 PPP1R15AO75807 674 aaPredicted RBP30■■■□□ 2.39
MSH5-215ENST00000482280 E9PCH4 1651 aa29.96■■■□□ 2.39
MSH5-215ENST00000482280 PIP4K2BP78356 416 aa29.93■■■□□ 2.38
MSH5-215ENST00000482280 NAIPQ13075 1403 aa29.93■■■□□ 2.38
MSH5-215ENST00000482280 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.92■■■□□ 2.38
MSH5-215ENST00000482280 TRIM52Q96A61 297 aa29.91■■■□□ 2.38
MSH5-215ENST00000482280 SLC26A8Q96RN1 970 aa29.9■■■□□ 2.38
MSH5-215ENST00000482280 RIMS2Q9UQ26 1411 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms