RNA–Protein interactions for RNA: ENST00000482194.1

ITM2A-206, Transcript of integral membrane protein 2A, humanhuman

TSL 2

Gene ITM2A, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-206ENST00000482194 FAM135AQ9P2D6 1515 aa17.1■□□□□ 0.33
ITM2A-206ENST00000482194 XIRP1Q702N8 1843 aaKnown RBP17.08■□□□□ 0.33
ITM2A-206ENST00000482194 FBXO31Q5XUX0 539 aaPredicted RBP17.08■□□□□ 0.32
ITM2A-206ENST00000482194 UGGT1Q9NYU2 1555 aa17.07■□□□□ 0.32
ITM2A-206ENST00000482194 CDK12Q9NYV4 1490 aaPredicted RBP17.07■□□□□ 0.32
ITM2A-206ENST00000482194 SPAG9O60271 1321 aaKnown RBP17.07■□□□□ 0.32
ITM2A-206ENST00000482194 CLIP1P30622 1438 aa17.06■□□□□ 0.32
ITM2A-206ENST00000482194 RBM33Q96EV2 1170 aaKnown RBP17.06■□□□□ 0.32
ITM2A-206ENST00000482194 SAMD9LQ8IVG5 1584 aa17.06■□□□□ 0.32
ITM2A-206ENST00000482194 A2MP01023 1474 aa17.05■□□□□ 0.32
ITM2A-206ENST00000482194 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
ITM2A-206ENST00000482194 PLXNC1O60486 1568 aa17.04■□□□□ 0.32
ITM2A-206ENST00000482194 SETBP1Q9Y6X0 1596 aa17.04■□□□□ 0.32
ITM2A-206ENST00000482194 PHLPP1O60346 1717 aa17.04■□□□□ 0.32
ITM2A-206ENST00000482194 PREX2Q70Z35 1606 aa17.03■□□□□ 0.32
ITM2A-206ENST00000482194 NLRP1Q9C000 1473 aa17.02■□□□□ 0.32
ITM2A-206ENST00000482194 NUTM2BA6NNL0 878 aaPredicted RBP17.01■□□□□ 0.31
ITM2A-206ENST00000482194 NUTM2EB1AL46 878 aaPredicted RBP17.01■□□□□ 0.31
ITM2A-206ENST00000482194 NUTM2DQ5VT03 806 aaPredicted RBP17.01■□□□□ 0.31
ITM2A-206ENST00000482194 NUTM2AQ8IVF1 878 aaPredicted RBP17.01■□□□□ 0.31
ITM2A-206ENST00000482194 KDM5DQ9BY66 1539 aa17.01■□□□□ 0.31
ITM2A-206ENST00000482194 SPATA31A6Q5VVP1 1343 aa17■□□□□ 0.31
ITM2A-206ENST00000482194 LRP6O75581 1613 aa17■□□□□ 0.31
ITM2A-206ENST00000482194 ATP7AQ04656 1500 aa17■□□□□ 0.31
ITM2A-206ENST00000482194 PZPP20742 1482 aa16.99■□□□□ 0.31
ITM2A-206ENST00000482194 LRRC9Q6ZRR7 1453 aa16.99■□□□□ 0.31
ITM2A-206ENST00000482194 ZC3H13Q5T200 1668 aaKnown RBP16.98■□□□□ 0.31
ITM2A-206ENST00000482194 MIA2Q96PC5 1412 aa16.98■□□□□ 0.31
ITM2A-206ENST00000482194 ZNF777Q9ULD5 760 aaPredicted RBP16.97■□□□□ 0.31
ITM2A-206ENST00000482194 TMEM94Q12767 1356 aa16.95■□□□□ 0.3
ITM2A-206ENST00000482194 HNRNPMP52272 730 aaKnown RBP eCLIP16.94■□□□□ 0.3
ITM2A-206ENST00000482194 SYCP2Q9BX26 1530 aa16.93■□□□□ 0.3
ITM2A-206ENST00000482194 IFFO2Q5TF58 517 aa16.93■□□□□ 0.3
ITM2A-206ENST00000482194 RGS12O14924 1447 aa16.92■□□□□ 0.3
ITM2A-206ENST00000482194 ADGBQ8N7X0 1667 aa16.91■□□□□ 0.3
ITM2A-206ENST00000482194 ATAD2Q6PL18 1390 aa16.91■□□□□ 0.3
ITM2A-206ENST00000482194 INO80Q9ULG1 1556 aaPredicted RBP16.91■□□□□ 0.3
ITM2A-206ENST00000482194 FGD6Q6ZV73 1430 aa16.91■□□□□ 0.3
ITM2A-206ENST00000482194 COL16A1Q07092 1604 aaPredicted RBP16.9■□□□□ 0.3
ITM2A-206ENST00000482194 SLAIN2Q9P270 581 aa16.9■□□□□ 0.3
ITM2A-206ENST00000482194 SCAF11Q99590 1463 aaKnown RBP16.89■□□□□ 0.29
ITM2A-206ENST00000482194 PROSER2Q86WR7 435 aaPredicted RBP16.89■□□□□ 0.29
ITM2A-206ENST00000482194 CDC42BPAQ5VT25 1732 aa16.89■□□□□ 0.29
ITM2A-206ENST00000482194 AFF2P51816 1311 aa16.89■□□□□ 0.29
ITM2A-206ENST00000482194 WASHC2CQ9Y4E1 1318 aa16.89■□□□□ 0.29
ITM2A-206ENST00000482194 RBM6P78332 1123 aaKnown RBP16.88■□□□□ 0.29
ITM2A-206ENST00000482194 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
ITM2A-206ENST00000482194 FMN1Q68DA7 1419 aa16.87■□□□□ 0.29
ITM2A-206ENST00000482194 TXNDC2Q86VQ3 553 aa16.86■□□□□ 0.29
ITM2A-206ENST00000482194 MSH6P52701 1360 aa16.86■□□□□ 0.29
ITM2A-206ENST00000482194 CHIC1Q5VXU3 224 aa16.85■□□□□ 0.29
ITM2A-206ENST00000482194 QTRT2Q9H974 415 aaKnown RBP16.85■□□□□ 0.29
ITM2A-206ENST00000482194 MAP3K1Q13233 1512 aa16.85■□□□□ 0.29
ITM2A-206ENST00000482194 KIF3BO15066 747 aa16.84■□□□□ 0.29
ITM2A-206ENST00000482194 SHPRHQ149N8 1683 aa16.84■□□□□ 0.29
ITM2A-206ENST00000482194 LTKP29376 864 aa16.83■□□□□ 0.28
ITM2A-206ENST00000482194 KCNA6P17658 529 aa16.82■□□□□ 0.28
ITM2A-206ENST00000482194 NGLY1Q96IV0 654 aa16.81■□□□□ 0.28
ITM2A-206ENST00000482194 EID1Q9Y6B2 187 aa16.81■□□□□ 0.28
ITM2A-206ENST00000482194 LRP5O75197 1615 aa16.81■□□□□ 0.28
ITM2A-206ENST00000482194 CCDC125Q86Z20 511 aa16.8■□□□□ 0.28
ITM2A-206ENST00000482194 KIAA1107Q9UPP5 1409 aa16.79■□□□□ 0.28
ITM2A-206ENST00000482194 DHX29Q7Z478 1369 aaKnown RBP16.79■□□□□ 0.28
ITM2A-206ENST00000482194 PLEKHH2Q8IVE3 1493 aa16.79■□□□□ 0.28
ITM2A-206ENST00000482194 UBR1Q8IWV7 1749 aa16.78■□□□□ 0.28
ITM2A-206ENST00000482194 TIAM1Q13009 1591 aa16.77■□□□□ 0.28
ITM2A-206ENST00000482194 PRDM15P57071 1507 aaPredicted RBP16.77■□□□□ 0.28
ITM2A-206ENST00000482194 LRRIQ1Q96JM4 1722 aa16.77■□□□□ 0.28
ITM2A-206ENST00000482194 YY1P25490 414 aa16.77■□□□□ 0.28
ITM2A-206ENST00000482194 C8orf37Q96NL8 207 aa16.75■□□□□ 0.27
ITM2A-206ENST00000482194 ARHGAP23Q9P227 1491 aa16.74■□□□□ 0.27
ITM2A-206ENST00000482194 ABCC3O15438 1527 aa16.74■□□□□ 0.27
ITM2A-206ENST00000482194 SLIT1O75093 1534 aa16.74■□□□□ 0.27
ITM2A-206ENST00000482194 CFDP1Q9UEE9 299 aaPredicted RBP16.73■□□□□ 0.27
ITM2A-206ENST00000482194 NCOA2Q15596 1464 aa16.73■□□□□ 0.27
ITM2A-206ENST00000482194 AHDC1Q5TGY3 1603 aaPredicted RBP16.72■□□□□ 0.27
ITM2A-206ENST00000482194 NKTRP30414 1462 aaKnown RBP16.72■□□□□ 0.27
ITM2A-206ENST00000482194 GPATCH8Q9UKJ3 1502 aaKnown RBP16.71■□□□□ 0.27
ITM2A-206ENST00000482194 SLC26A8Q96RN1 970 aa16.7■□□□□ 0.26
ITM2A-206ENST00000482194 CFAP65Q6ZU64 1925 aaKnown RBP16.7■□□□□ 0.26
ITM2A-206ENST00000482194 RTEL1-TNFRSF6BF6WH68 1400 aa16.7■□□□□ 0.26
ITM2A-206ENST00000482194 ERVK-7P63135 1459 aa16.69■□□□□ 0.26
ITM2A-206ENST00000482194 KDM5AP29375 1690 aaKnown RBP16.69■□□□□ 0.26
ITM2A-206ENST00000482194 NWD1Q149M9 1564 aa16.68■□□□□ 0.26
ITM2A-206ENST00000482194 EP400Q96L91 3159 aa16.68■□□□□ 0.26
ITM2A-206ENST00000482194 CCDC18Q5T9S5 1454 aa16.67■□□□□ 0.26
ITM2A-206ENST00000482194 DIP2AQ14689 1571 aa16.65■□□□□ 0.26
ITM2A-206ENST00000482194 C14orf37Q86TY3 774 aa16.65■□□□□ 0.26
ITM2A-206ENST00000482194 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
ITM2A-206ENST00000482194 TMEM2Q9UHN6 1383 aa16.63■□□□□ 0.25
ITM2A-206ENST00000482194 ARHGAP35Q9NRY4 1499 aa16.62■□□□□ 0.25
ITM2A-206ENST00000482194 CADPS2Q86UW7 1296 aa16.62■□□□□ 0.25
ITM2A-206ENST00000482194 TRPC5Q9UL62 973 aaPredicted RBP16.62■□□□□ 0.25
ITM2A-206ENST00000482194 NHSL1Q5SYE7 1610 aa16.62■□□□□ 0.25
ITM2A-206ENST00000482194 ATF3P18847 181 aa16.61■□□□□ 0.25
ITM2A-206ENST00000482194 BCANQ96GW7 911 aa16.61■□□□□ 0.25
ITM2A-206ENST00000482194 CCNB3Q8WWL7 1395 aa16.61■□□□□ 0.25
ITM2A-206ENST00000482194 USP21Q9UK80 565 aa16.6■□□□□ 0.25
ITM2A-206ENST00000482194 SENP3-EIF4A1A0A087X0R7 540 aa16.59■□□□□ 0.25
ITM2A-206ENST00000482194 PSDA5PKW4 1024 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms