RNA–Protein interactions for RNA: ENST00000482116.1

LMO7-210, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-210ENST00000482116 PSEN2P49810 448 aa12.57□□□□□ -0.4
LMO7-210ENST00000482116 CUX2O14529 1486 aa12.57□□□□□ -0.4
LMO7-210ENST00000482116 HMGXB3Q12766 1538 aa12.57□□□□□ -0.4
LMO7-210ENST00000482116 SPDYE16A6NNV3 312 aaPredicted RBP12.56□□□□□ -0.4
LMO7-210ENST00000482116 PTGER2P43116 358 aa12.56□□□□□ -0.4
LMO7-210ENST00000482116 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
LMO7-210ENST00000482116 PTPREP23469 700 aa12.55□□□□□ -0.4
LMO7-210ENST00000482116 PHF14O94880 888 aa12.54□□□□□ -0.4
LMO7-210ENST00000482116 BAZ1AQ9NRL2 1556 aaPredicted RBP12.53□□□□□ -0.4
LMO7-210ENST00000482116 HAP1P54257 671 aaPredicted RBP12.53□□□□□ -0.4
LMO7-210ENST00000482116 TYW1BQ6NUM6 668 aa12.53□□□□□ -0.4
LMO7-210ENST00000482116 FBXW7Q969H0 707 aa12.53□□□□□ -0.4
LMO7-210ENST00000482116 MYT1LQ9UL68 1186 aa12.53□□□□□ -0.4
LMO7-210ENST00000482116 PDIA6Q15084 440 aa12.52□□□□□ -0.41
LMO7-210ENST00000482116 DMRTA1Q5VZB9 504 aa12.52□□□□□ -0.41
LMO7-210ENST00000482116 PCDHGA10Q9Y5H3 936 aa12.52□□□□□ -0.41
LMO7-210ENST00000482116 BAZ1BQ9UIG0 1483 aaKnown RBP12.52□□□□□ -0.41
LMO7-210ENST00000482116 MROH2BQ7Z745 1585 aa12.52□□□□□ -0.41
LMO7-210ENST00000482116 ADGRD1Q6QNK2 874 aa12.51□□□□□ -0.41
LMO7-210ENST00000482116 DDX12PQ92771 950 aa12.51□□□□□ -0.41
LMO7-210ENST00000482116 EPAS1Q99814 870 aa12.51□□□□□ -0.41
LMO7-210ENST00000482116 ADAM33Q9BZ11 813 aa12.51□□□□□ -0.41
LMO7-210ENST00000482116 ARIH1Q9Y4X5 557 aaPredicted RBP12.51□□□□□ -0.41
LMO7-210ENST00000482116 TK2O00142 265 aa12.5□□□□□ -0.41
LMO7-210ENST00000482116 STAC3Q96MF2 364 aa12.5□□□□□ -0.41
LMO7-210ENST00000482116 PEG3Q9GZU2 1588 aa12.48□□□□□ -0.41
LMO7-210ENST00000482116 RNF166Q96A37 237 aaPredicted RBP12.48□□□□□ -0.41
LMO7-210ENST00000482116 NBR1Q14596 966 aa12.45□□□□□ -0.42
LMO7-210ENST00000482116 P3H3Q8IVL6 736 aa12.45□□□□□ -0.42
LMO7-210ENST00000482116 RBM33Q96EV2 1170 aaKnown RBP12.45□□□□□ -0.42
LMO7-210ENST00000482116 ARHGEF1Q92888 912 aaKnown RBP12.44□□□□□ -0.42
LMO7-210ENST00000482116 GRXCR2A6NFK2 248 aa12.43□□□□□ -0.42
LMO7-210ENST00000482116 THOC2Q8NI27 1593 aaKnown RBP12.43□□□□□ -0.42
LMO7-210ENST00000482116 KCNV2Q8TDN2 545 aa12.42□□□□□ -0.42
LMO7-210ENST00000482116 VPS9D1Q9Y2B5 631 aa12.42□□□□□ -0.42
LMO7-210ENST00000482116 PPP1R3GB7ZBB8 358 aa12.41□□□□□ -0.42
LMO7-210ENST00000482116 SLC4A5Q9BY07 1137 aa12.41□□□□□ -0.42
LMO7-210ENST00000482116 KIF21AQ7Z4S6 1674 aa12.41□□□□□ -0.42
LMO7-210ENST00000482116 LAMC3Q9Y6N6 1575 aa12.4□□□□□ -0.42
LMO7-210ENST00000482116 MAP3K7O43318 606 aa12.4□□□□□ -0.42
LMO7-210ENST00000482116 C6orf132Q5T0Z8 1188 aa12.39□□□□□ -0.43
LMO7-210ENST00000482116 ZBED2Q9BTP6 218 aa12.39□□□□□ -0.43
LMO7-210ENST00000482116 HRO43593 1189 aa12.37□□□□□ -0.43
LMO7-210ENST00000482116 EN1Q05925 392 aaPredicted RBP12.37□□□□□ -0.43
LMO7-210ENST00000482116 WIZO95785 1651 aa12.37□□□□□ -0.43
LMO7-210ENST00000482116 COL9A1P20849 921 aa12.35□□□□□ -0.43
LMO7-210ENST00000482116 NBPF3Q9H094 633 aa12.34□□□□□ -0.43
LMO7-210ENST00000482116 GOLGA8CPA6NN73 597 aa12.33□□□□□ -0.44
LMO7-210ENST00000482116 PDS5BQ9NTI5 1447 aa12.32□□□□□ -0.44
LMO7-210ENST00000482116 MRPL50Q8N5N7 158 aaKnown RBP12.32□□□□□ -0.44
LMO7-210ENST00000482116 CADPSQ9ULU8 1353 aa12.31□□□□□ -0.44
LMO7-210ENST00000482116 TSR1Q2NL82 804 aaKnown RBP12.31□□□□□ -0.44
LMO7-210ENST00000482116 PROX2Q3B8N5 592 aa12.31□□□□□ -0.44
LMO7-210ENST00000482116 OSBPP22059 807 aa12.29□□□□□ -0.44
LMO7-210ENST00000482116 KCTD12Q96CX2 325 aaKnown RBP12.29□□□□□ -0.44
LMO7-210ENST00000482116 RABGEF1Q9UJ41 708 aa12.29□□□□□ -0.44
LMO7-210ENST00000482116 BHMG1C9JSJ3 638 aaPredicted RBP12.27□□□□□ -0.45
LMO7-210ENST00000482116 VSIG10Q8N0Z9 540 aa12.27□□□□□ -0.45
LMO7-210ENST00000482116 CERKQ8TCT0 537 aa12.26□□□□□ -0.45
LMO7-210ENST00000482116 KIAA1468Q9P260 1216 aa12.26□□□□□ -0.45
LMO7-210ENST00000482116 TRIM6-TRIM34B2RNG4 842 aa12.25□□□□□ -0.45
LMO7-210ENST00000482116 ONECUT3O60422 494 aaPredicted RBP12.25□□□□□ -0.45
LMO7-210ENST00000482116 MLLT3P42568 568 aaPredicted RBP12.25□□□□□ -0.45
LMO7-210ENST00000482116 HCSTQ9UBK5 93 aa12.25□□□□□ -0.45
LMO7-210ENST00000482116 KDM2AQ9Y2K7 1162 aa12.25□□□□□ -0.45
LMO7-210ENST00000482116 PRIM1P49642 420 aaKnown RBP12.24□□□□□ -0.45
LMO7-210ENST00000482116 MRC2Q9UBG0 1479 aa12.24□□□□□ -0.45
LMO7-210ENST00000482116 PACS2Q86VP3 889 aa12.23□□□□□ -0.45
LMO7-210ENST00000482116 WDR62O43379 1518 aa12.22□□□□□ -0.45
LMO7-210ENST00000482116 WNT2BQ93097 391 aa12.22□□□□□ -0.45
LMO7-210ENST00000482116 RSF1Q96T23 1441 aaPredicted RBP12.21□□□□□ -0.45
LMO7-210ENST00000482116 SEMA3EO15041 775 aa12.21□□□□□ -0.45
LMO7-210ENST00000482116 PRSS12P56730 875 aa12.2□□□□□ -0.46
LMO7-210ENST00000482116 LAPTM4BQ86VI4 370 aa12.2□□□□□ -0.46
LMO7-210ENST00000482116 CDCA7LQ96GN5 454 aa12.2□□□□□ -0.46
LMO7-210ENST00000482116 CDHR5Q9HBB8 845 aa12.2□□□□□ -0.46
LMO7-210ENST00000482116 ANKK1Q8NFD2 765 aa12.18□□□□□ -0.46
LMO7-210ENST00000482116 SEPT9Q9UHD8 586 aaPredicted RBP12.18□□□□□ -0.46
LMO7-210ENST00000482116 FANCD2Q9BXW9 1451 aa12.18□□□□□ -0.46
LMO7-210ENST00000482116 CEP164Q9UPV0 1460 aa12.17□□□□□ -0.46
LMO7-210ENST00000482116 PTPN5P54829 565 aa12.17□□□□□ -0.46
LMO7-210ENST00000482116 SMYD5Q6GMV2 418 aa12.17□□□□□ -0.46
LMO7-210ENST00000482116 TSKSQ9UJT2 592 aa12.17□□□□□ -0.46
LMO7-210ENST00000482116 CFTRP13569 1480 aa12.16□□□□□ -0.46
LMO7-210ENST00000482116 NUTM2FA1L443 756 aa12.15□□□□□ -0.46
LMO7-210ENST00000482116 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
LMO7-210ENST00000482116 THSD4Q6ZMP0 1018 aa12.15□□□□□ -0.46
LMO7-210ENST00000482116 TOP2AP11388 1531 aaKnown RBP12.14□□□□□ -0.47
LMO7-210ENST00000482116 NBPF26B4DH59 902 aa12.13□□□□□ -0.47
LMO7-210ENST00000482116 ZFRQ96KR1 1074 aaKnown RBP12.13□□□□□ -0.47
LMO7-210ENST00000482116 RBM27Q9P2N5 1060 aaKnown RBP12.13□□□□□ -0.47
LMO7-210ENST00000482116 URB2Q14146 1524 aaKnown RBP12.11□□□□□ -0.47
LMO7-210ENST00000482116 TESPA1A2RU30 521 aaPredicted RBP12.11□□□□□ -0.47
LMO7-210ENST00000482116 PNMA3Q9UL41 463 aa12.1□□□□□ -0.47
LMO7-210ENST00000482116 PADI6Q6TGC4 694 aa12.09□□□□□ -0.47
LMO7-210ENST00000482116 TATDN2Q93075 761 aa12.09□□□□□ -0.47
LMO7-210ENST00000482116 NPDC1Q9NQX5 325 aaPredicted RBP12.09□□□□□ -0.47
LMO7-210ENST00000482116 SMAPO00193 183 aa12.08□□□□□ -0.48
LMO7-210ENST00000482116 FAM198AQ9UFP1 575 aa12.08□□□□□ -0.48
LMO7-210ENST00000482116 BCAMP50895 628 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms