RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 DIP2BQ9P265 1576 aa16.75■□□□□ 0.27
GGPS1-205ENST00000482013 HECW2Q9P2P5 1572 aa16.72■□□□□ 0.27
GGPS1-205ENST00000482013 TEX14Q8IWB6 1497 aa16.71■□□□□ 0.27
GGPS1-205ENST00000482013 ATP10AO60312 1499 aa16.7■□□□□ 0.26
GGPS1-205ENST00000482013 L3MBTL2Q969R5 705 aa16.7■□□□□ 0.26
GGPS1-205ENST00000482013 BCORL1Q5H9F3 1711 aa16.7■□□□□ 0.26
GGPS1-205ENST00000482013 VWDEQ8N2E2 1590 aa16.69■□□□□ 0.26
GGPS1-205ENST00000482013 KANK1Q14678 1352 aa16.69■□□□□ 0.26
GGPS1-205ENST00000482013 RICTORQ6R327 1708 aa16.68■□□□□ 0.26
GGPS1-205ENST00000482013 FAM69CQ0P6D2 419 aa16.68■□□□□ 0.26
GGPS1-205ENST00000482013 MYT1LQ9UL68 1186 aa16.68■□□□□ 0.26
GGPS1-205ENST00000482013 A2MP01023 1474 aa16.67■□□□□ 0.26
GGPS1-205ENST00000482013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.67■□□□□ 0.26
GGPS1-205ENST00000482013 PRDM15P57071 1507 aaPredicted RBP16.66■□□□□ 0.26
GGPS1-205ENST00000482013 TET3O43151 1660 aa16.66■□□□□ 0.26
GGPS1-205ENST00000482013 RNF17Q9BXT8 1623 aaKnown RBP16.66■□□□□ 0.26
GGPS1-205ENST00000482013 PPRC1Q5VV67 1664 aaKnown RBP16.64■□□□□ 0.25
GGPS1-205ENST00000482013 KIF3BO15066 747 aa16.63■□□□□ 0.25
GGPS1-205ENST00000482013 CCDC144AA2RUR9 1427 aa16.62■□□□□ 0.25
GGPS1-205ENST00000482013 ZMYM4Q5VZL5 1548 aa16.62■□□□□ 0.25
GGPS1-205ENST00000482013 KIF13AQ9H1H9 1805 aa16.62■□□□□ 0.25
GGPS1-205ENST00000482013 ABCA6Q8N139 1617 aa16.62■□□□□ 0.25
GGPS1-205ENST00000482013 MROH1Q8NDA8 1641 aa16.62■□□□□ 0.25
GGPS1-205ENST00000482013 E9PCH4 1651 aa16.62■□□□□ 0.25
GGPS1-205ENST00000482013 PLA2R1Q13018 1463 aa16.61■□□□□ 0.25
GGPS1-205ENST00000482013 LMTK2Q8IWU2 1503 aa16.61■□□□□ 0.25
GGPS1-205ENST00000482013 UHRF1BP1Q6BDS2 1440 aa16.61■□□□□ 0.25
GGPS1-205ENST00000482013 FRMPD1Q5SYB0 1578 aa16.6■□□□□ 0.25
GGPS1-205ENST00000482013 PTPRTO14522 1441 aa16.59■□□□□ 0.25
GGPS1-205ENST00000482013 DIP2CQ9Y2E4 1556 aa16.59■□□□□ 0.25
GGPS1-205ENST00000482013 TSPOAP1O95153 1857 aa16.59■□□□□ 0.25
GGPS1-205ENST00000482013 SPHKAPQ2M3C7 1700 aa16.58■□□□□ 0.24
GGPS1-205ENST00000482013 TRPM2O94759 1503 aa16.57■□□□□ 0.24
GGPS1-205ENST00000482013 RAPGEF3O95398 923 aa16.57■□□□□ 0.24
GGPS1-205ENST00000482013 NBPF8Q3BBV2 869 aa16.56■□□□□ 0.24
GGPS1-205ENST00000482013 NEURL4Q96JN8 1562 aa16.55■□□□□ 0.24
GGPS1-205ENST00000482013 EIF4G2P78344 907 aaKnown RBP eCLIP16.55■□□□□ 0.24
GGPS1-205ENST00000482013 STAC3Q96MF2 364 aa16.55■□□□□ 0.24
GGPS1-205ENST00000482013 REREQ9P2R6 1566 aa16.54■□□□□ 0.24
GGPS1-205ENST00000482013 EFCAB6Q5THR3 1501 aa16.54■□□□□ 0.24
GGPS1-205ENST00000482013 CEP152O94986 1710 aa16.53■□□□□ 0.24
GGPS1-205ENST00000482013 ZC3H13Q5T200 1668 aaKnown RBP16.51■□□□□ 0.23
GGPS1-205ENST00000482013 RALGAPBQ86X10 1494 aa16.51■□□□□ 0.23
GGPS1-205ENST00000482013 HSPA5P11021 654 aaKnown RBP16.5■□□□□ 0.23
GGPS1-205ENST00000482013 AGLP35573 1532 aa16.49■□□□□ 0.23
GGPS1-205ENST00000482013 SPATA31E1Q6ZUB1 1445 aa16.48■□□□□ 0.23
GGPS1-205ENST00000482013 YEATS2Q9ULM3 1422 aa16.48■□□□□ 0.23
GGPS1-205ENST00000482013 DCAF11Q8TEB1 546 aa16.48■□□□□ 0.23
GGPS1-205ENST00000482013 PPP6R1Q9UPN7 881 aa16.48■□□□□ 0.23
GGPS1-205ENST00000482013 CLTCL1P53675 1640 aa16.48■□□□□ 0.23
GGPS1-205ENST00000482013 ABCC3O15438 1527 aa16.47■□□□□ 0.23
GGPS1-205ENST00000482013 ARHGAP31Q2M1Z3 1444 aa16.46■□□□□ 0.23
GGPS1-205ENST00000482013 POLR1AO95602 1720 aaPredicted RBP16.46■□□□□ 0.23
GGPS1-205ENST00000482013 KIF1BO60333 1816 aa16.46■□□□□ 0.23
GGPS1-205ENST00000482013 PRAG1Q86YV5 1406 aa16.45■□□□□ 0.22
GGPS1-205ENST00000482013 CAMSAP1Q5T5Y3 1602 aa16.45■□□□□ 0.22
GGPS1-205ENST00000482013 GGT6Q6P531 493 aa16.45■□□□□ 0.22
GGPS1-205ENST00000482013 MIER1Q8N108 512 aa16.45■□□□□ 0.22
GGPS1-205ENST00000482013 LAMC1P11047 1609 aa16.45■□□□□ 0.22
GGPS1-205ENST00000482013 TRPM1Q7Z4N2 1603 aa16.45■□□□□ 0.22
GGPS1-205ENST00000482013 WASHC2CQ9Y4E1 1318 aa16.45■□□□□ 0.22
GGPS1-205ENST00000482013 CNTLNQ9NXG0 1405 aa16.44■□□□□ 0.22
GGPS1-205ENST00000482013 KDM2AQ9Y2K7 1162 aa16.43■□□□□ 0.22
GGPS1-205ENST00000482013 RGL3Q3MIN7 710 aa16.42■□□□□ 0.22
GGPS1-205ENST00000482013 NPATQ14207 1427 aa16.42■□□□□ 0.22
GGPS1-205ENST00000482013 GPRASP1Q5JY77 1395 aa16.41■□□□□ 0.22
GGPS1-205ENST00000482013 HIRIP3Q9BW71 556 aaPredicted RBP16.41■□□□□ 0.22
GGPS1-205ENST00000482013 ARID4BQ4LE39 1312 aaPredicted RBP16.41■□□□□ 0.22
GGPS1-205ENST00000482013 ARHGEF40Q8TER5 1519 aa16.4■□□□□ 0.22
GGPS1-205ENST00000482013 DDX10Q13206 875 aaKnown RBP16.4■□□□□ 0.22
GGPS1-205ENST00000482013 ZNF326Q5BKZ1 582 aaKnown RBP16.4■□□□□ 0.22
GGPS1-205ENST00000482013 NOS1P29475 1434 aa16.39■□□□□ 0.21
GGPS1-205ENST00000482013 COL17A1Q9UMD9 1497 aaPredicted RBP16.39■□□□□ 0.21
GGPS1-205ENST00000482013 USP47Q96K76 1375 aa16.38■□□□□ 0.21
GGPS1-205ENST00000482013 CARD11Q9BXL7 1154 aa16.38■□□□□ 0.21
GGPS1-205ENST00000482013 ROCK2O75116 1388 aaKnown RBP16.38■□□□□ 0.21
GGPS1-205ENST00000482013 KIAA1210Q9ULL0 1709 aa16.37■□□□□ 0.21
GGPS1-205ENST00000482013 MYOM2P54296 1465 aa16.36■□□□□ 0.21
GGPS1-205ENST00000482013 PIK3C2BO00750 1634 aa16.36■□□□□ 0.21
GGPS1-205ENST00000482013 MADDQ8WXG6 1647 aa16.36■□□□□ 0.21
GGPS1-205ENST00000482013 CCDC7Q96M83 1385 aa16.36■□□□□ 0.21
GGPS1-205ENST00000482013 IFT172Q9UG01 1749 aa16.36■□□□□ 0.21
GGPS1-205ENST00000482013 WASHC2AQ641Q2 1341 aa16.35■□□□□ 0.21
GGPS1-205ENST00000482013 CFAP65Q6ZU64 1925 aaKnown RBP16.35■□□□□ 0.21
GGPS1-205ENST00000482013 ADGRB3O60242 1522 aa16.35■□□□□ 0.21
GGPS1-205ENST00000482013 SIGLEC1Q9BZZ2 1709 aa16.34■□□□□ 0.21
GGPS1-205ENST00000482013 RPGRIP1LQ68CZ1 1315 aa16.34■□□□□ 0.21
GGPS1-205ENST00000482013 PREX1Q8TCU6 1659 aa16.32■□□□□ 0.2
GGPS1-205ENST00000482013 SLC52A1Q9NWF4 448 aa16.32■□□□□ 0.2
GGPS1-205ENST00000482013 MROH2AA6NES4 1674 aa16.31■□□□□ 0.2
GGPS1-205ENST00000482013 SYNMO15061 1565 aa16.31■□□□□ 0.2
GGPS1-205ENST00000482013 UGGT1Q9NYU2 1555 aa16.31■□□□□ 0.2
GGPS1-205ENST00000482013 PPLO60437 1756 aa16.3■□□□□ 0.2
GGPS1-205ENST00000482013 NRXN1Q9ULB1 1477 aa16.29■□□□□ 0.2
GGPS1-205ENST00000482013 ANP32CO43423 234 aa16.29■□□□□ 0.2
GGPS1-205ENST00000482013 KIF7Q2M1P5 1343 aa16.28■□□□□ 0.2
GGPS1-205ENST00000482013 C11orf95C9JLR9 678 aaPredicted RBP16.28■□□□□ 0.2
GGPS1-205ENST00000482013 NBPF1Q3BBV0 1214 aa16.28■□□□□ 0.2
GGPS1-205ENST00000482013 IQGAP1P46940 1657 aa16.27■□□□□ 0.19
GGPS1-205ENST00000482013 CLTCQ00610 1675 aaKnown RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms