RNA–Protein interactions for RNA: ENST00000481498.1

GKN2-202, Transcript of gastrokine 2, humanhuman

TSL 2 BASIC

Gene GKN2, Length 1,498 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN2-202ENST00000481498 CADPSQ9ULU8 1353 aa12.45□□□□□ -0.42
GKN2-202ENST00000481498 ZNF316A6NFI3 1004 aaPredicted RBP12.45□□□□□ -0.42
GKN2-202ENST00000481498 PTCD2Q8WV60 388 aaKnown RBP12.45□□□□□ -0.42
GKN2-202ENST00000481498 PDE4AP27815 886 aa12.44□□□□□ -0.42
GKN2-202ENST00000481498 SPNS2Q8IVW8 549 aa12.44□□□□□ -0.42
GKN2-202ENST00000481498 BAZ1BQ9UIG0 1483 aaKnown RBP12.43□□□□□ -0.42
GKN2-202ENST00000481498 CEP164Q9UPV0 1460 aa12.43□□□□□ -0.42
GKN2-202ENST00000481498 PPP1R15BQ5SWA1 713 aa12.43□□□□□ -0.42
GKN2-202ENST00000481498 CADPS2Q86UW7 1296 aa12.43□□□□□ -0.42
GKN2-202ENST00000481498 MMRN1Q13201 1228 aa12.42□□□□□ -0.42
GKN2-202ENST00000481498 ZNF687Q8N1G0 1237 aa12.4□□□□□ -0.42
GKN2-202ENST00000481498 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.43
GKN2-202ENST00000481498 LHX6Q9UPM6 363 aa12.4□□□□□ -0.43
GKN2-202ENST00000481498 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
GKN2-202ENST00000481498 SPATA31D1Q6ZQQ2 1576 aa12.38□□□□□ -0.43
GKN2-202ENST00000481498 MFSD10Q14728 455 aa12.37□□□□□ -0.43
GKN2-202ENST00000481498 SPRYD3Q8NCJ5 442 aa12.37□□□□□ -0.43
GKN2-202ENST00000481498 DDX27Q96GQ7 796 aaKnown RBP12.37□□□□□ -0.43
GKN2-202ENST00000481498 OXER1Q8TDS5 423 aa12.36□□□□□ -0.43
GKN2-202ENST00000481498 UPF1Q92900 1129 aaKnown RBP eCLIP12.35□□□□□ -0.43
GKN2-202ENST00000481498 CHD1O14646 1710 aa12.34□□□□□ -0.43
GKN2-202ENST00000481498 ADGRL1O94910 1474 aa12.34□□□□□ -0.43
GKN2-202ENST00000481498 NPM2Q86SE8 214 aaKnown RBP12.34□□□□□ -0.43
GKN2-202ENST00000481498 ZNF608Q9ULD9 1512 aaPredicted RBP12.34□□□□□ -0.43
GKN2-202ENST00000481498 TBC1D12O60347 775 aa12.34□□□□□ -0.43
GKN2-202ENST00000481498 SMARCA4P51532 1647 aa12.32□□□□□ -0.44
GKN2-202ENST00000481498 ZCCHC6Q5VYS8 1495 aaKnown RBP12.31□□□□□ -0.44
GKN2-202ENST00000481498 PAXIP1Q6ZW49 1069 aaPredicted RBP12.31□□□□□ -0.44
GKN2-202ENST00000481498 CFAP44Q96MT7 982 aa12.3□□□□□ -0.44
GKN2-202ENST00000481498 FANCD2Q9BXW9 1451 aa12.28□□□□□ -0.44
GKN2-202ENST00000481498 KIF13AQ9H1H9 1805 aa12.27□□□□□ -0.45
GKN2-202ENST00000481498 PSDA5PKW4 1024 aaPredicted RBP12.27□□□□□ -0.45
GKN2-202ENST00000481498 POTEEQ6S8J3 1075 aa12.26□□□□□ -0.45
GKN2-202ENST00000481498 EMILIN3Q9NT22 766 aa12.26□□□□□ -0.45
GKN2-202ENST00000481498 IFT140Q96RY7 1462 aa12.25□□□□□ -0.45
GKN2-202ENST00000481498 URB2Q14146 1524 aaKnown RBP12.25□□□□□ -0.45
GKN2-202ENST00000481498 KDM6BO15054 1643 aa12.25□□□□□ -0.45
GKN2-202ENST00000481498 GAPVD1Q14C86 1478 aa12.25□□□□□ -0.45
GKN2-202ENST00000481498 PBX2P40425 430 aa12.24□□□□□ -0.45
GKN2-202ENST00000481498 AXIN2Q9Y2T1 843 aa12.22□□□□□ -0.45
GKN2-202ENST00000481498 LSM11P83369 360 aaKnown RBP eCLIP12.21□□□□□ -0.45
GKN2-202ENST00000481498 CLASP1Q7Z460 1538 aa12.21□□□□□ -0.46
GKN2-202ENST00000481498 PPP4R3BQ5MIZ7 849 aa12.21□□□□□ -0.46
GKN2-202ENST00000481498 EVI5O60447 810 aa12.2□□□□□ -0.46
GKN2-202ENST00000481498 CAMK2BQ13554 666 aa12.2□□□□□ -0.46
GKN2-202ENST00000481498 MAP3K9P80192 1104 aa12.19□□□□□ -0.46
GKN2-202ENST00000481498 ANKRD13DQ6ZTN6 518 aa12.19□□□□□ -0.46
GKN2-202ENST00000481498 ANO8Q9HCE9 1232 aaPredicted RBP12.18□□□□□ -0.46
GKN2-202ENST00000481498 EIF4G3O43432 1585 aaKnown RBP12.18□□□□□ -0.46
GKN2-202ENST00000481498 ARHGAP33O14559 1287 aa12.16□□□□□ -0.46
GKN2-202ENST00000481498 FAM69CQ0P6D2 419 aa12.16□□□□□ -0.46
GKN2-202ENST00000481498 ZNF454Q8N9F8 522 aa12.16□□□□□ -0.46
GKN2-202ENST00000481498 FOSBP53539 338 aa12.14□□□□□ -0.47
GKN2-202ENST00000481498 CERKQ8TCT0 537 aa12.14□□□□□ -0.47
GKN2-202ENST00000481498 SUPT5HO00267 1087 aaKnown RBP12.13□□□□□ -0.47
GKN2-202ENST00000481498 PSEN2P49810 448 aa12.13□□□□□ -0.47
GKN2-202ENST00000481498 JPH4Q96JJ6 628 aa12.12□□□□□ -0.47
GKN2-202ENST00000481498 DPYSL4O14531 572 aa12.11□□□□□ -0.47
GKN2-202ENST00000481498 TRIM26Q12899 539 aaPredicted RBP12.11□□□□□ -0.47
GKN2-202ENST00000481498 DMRTA1Q5VZB9 504 aa12.11□□□□□ -0.47
GKN2-202ENST00000481498 PEG3Q9GZU2 1588 aa12.11□□□□□ -0.47
GKN2-202ENST00000481498 MYT1LQ9UL68 1186 aa12.1□□□□□ -0.47
GKN2-202ENST00000481498 PTGER2P43116 358 aa12.09□□□□□ -0.47
GKN2-202ENST00000481498 NBR1Q14596 966 aa12.09□□□□□ -0.47
GKN2-202ENST00000481498 KCNK17Q96T54 332 aa12.09□□□□□ -0.47
GKN2-202ENST00000481498 SYNJ1O43426 1573 aa12.09□□□□□ -0.47
GKN2-202ENST00000481498 BCL2L12Q9HB09 334 aa12.08□□□□□ -0.47
GKN2-202ENST00000481498 RNF166Q96A37 237 aaPredicted RBP12.08□□□□□ -0.48
GKN2-202ENST00000481498 AQRO60306 1485 aaKnown RBP eCLIP12.07□□□□□ -0.48
GKN2-202ENST00000481498 ABCC10Q5T3U5 1492 aa12.07□□□□□ -0.48
GKN2-202ENST00000481498 ADGRD1Q6QNK2 874 aa12.07□□□□□ -0.48
GKN2-202ENST00000481498 TSHZ2Q9NRE2 1034 aa12.06□□□□□ -0.48
GKN2-202ENST00000481498 ZDHHC16Q969W1 377 aa12.05□□□□□ -0.48
GKN2-202ENST00000481498 ADAM33Q9BZ11 813 aa12.05□□□□□ -0.48
GKN2-202ENST00000481498 TK2O00142 265 aa12.04□□□□□ -0.48
GKN2-202ENST00000481498 E2F4Q16254 413 aa12.04□□□□□ -0.48
GKN2-202ENST00000481498 KCNH8Q96L42 1107 aa12.04□□□□□ -0.48
GKN2-202ENST00000481498 WDR70Q9NW82 654 aa12.04□□□□□ -0.48
GKN2-202ENST00000481498 PCDHGA10Q9Y5H3 936 aa12.04□□□□□ -0.48
GKN2-202ENST00000481498 PTPREP23469 700 aa12.02□□□□□ -0.49
GKN2-202ENST00000481498 CHMP7Q8WUX9 453 aaPredicted RBP12.02□□□□□ -0.49
GKN2-202ENST00000481498 EIF5BO60841 1220 aaKnown RBP12.01□□□□□ -0.49
GKN2-202ENST00000481498 HRO43593 1189 aa12□□□□□ -0.49
GKN2-202ENST00000481498 PHF14O94880 888 aa12□□□□□ -0.49
GKN2-202ENST00000481498 PDIA6Q15084 440 aa12□□□□□ -0.49
GKN2-202ENST00000481498 UBTFP17480 764 aaKnown RBP11.99□□□□□ -0.49
GKN2-202ENST00000481498 TYW1BQ6NUM6 668 aa11.99□□□□□ -0.49
GKN2-202ENST00000481498 VPS9D1Q9Y2B5 631 aa11.97□□□□□ -0.49
GKN2-202ENST00000481498 ARIH1Q9Y4X5 557 aaPredicted RBP11.97□□□□□ -0.49
GKN2-202ENST00000481498 TOP2BQ02880 1626 aa11.97□□□□□ -0.49
GKN2-202ENST00000481498 CFTRP13569 1480 aa11.97□□□□□ -0.49
GKN2-202ENST00000481498 FBXW7Q969H0 707 aa11.96□□□□□ -0.49
GKN2-202ENST00000481498 DDX12PQ92771 950 aa11.95□□□□□ -0.5
GKN2-202ENST00000481498 SLC4A5Q9BY07 1137 aa11.95□□□□□ -0.5
GKN2-202ENST00000481498 SPDYE16A6NNV3 312 aaPredicted RBP11.95□□□□□ -0.5
GKN2-202ENST00000481498 EPAS1Q99814 870 aa11.95□□□□□ -0.5
GKN2-202ENST00000481498 ZBED2Q9BTP6 218 aa11.95□□□□□ -0.5
GKN2-202ENST00000481498 DIP2BQ9P265 1576 aa11.94□□□□□ -0.5
GKN2-202ENST00000481498 HRCP23327 699 aa11.93□□□□□ -0.5
GKN2-202ENST00000481498 TSPOAP1O95153 1857 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms