RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 SPATA31E1Q6ZUB1 1445 aa25.87■■□□□ 1.73
MRPL28-209ENST00000481453 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
MRPL28-209ENST00000481453 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
MRPL28-209ENST00000481453 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
MRPL28-209ENST00000481453 KIDINS220Q9ULH0 1771 aa25.85■■□□□ 1.73
MRPL28-209ENST00000481453 ATP10AO60312 1499 aa25.84■■□□□ 1.73
MRPL28-209ENST00000481453 ZNF518AQ6AHZ1 1483 aa25.83■■□□□ 1.72
MRPL28-209ENST00000481453 CCDC144AA2RUR9 1427 aa25.83■■□□□ 1.72
MRPL28-209ENST00000481453 WASHC2AQ641Q2 1341 aa25.82■■□□□ 1.72
MRPL28-209ENST00000481453 EIF2AK4Q9P2K8 1649 aaKnown RBP25.81■■□□□ 1.72
MRPL28-209ENST00000481453 KDM5CP41229 1560 aa25.81■■□□□ 1.72
MRPL28-209ENST00000481453 VWDEQ8N2E2 1590 aa25.8■■□□□ 1.72
MRPL28-209ENST00000481453 E9PCH4 1651 aa25.8■■□□□ 1.72
MRPL28-209ENST00000481453 RALGAPBQ86X10 1494 aa25.79■■□□□ 1.72
MRPL28-209ENST00000481453 POGZQ7Z3K3 1410 aa25.79■■□□□ 1.72
MRPL28-209ENST00000481453 DHX29Q7Z478 1369 aaKnown RBP25.78■■□□□ 1.72
MRPL28-209ENST00000481453 SUPT16HQ9Y5B9 1047 aaKnown RBP25.78■■□□□ 1.72
MRPL28-209ENST00000481453 MROH1Q8NDA8 1641 aa25.77■■□□□ 1.72
MRPL28-209ENST00000481453 CYB5RLQ6IPT4 315 aa25.76■■□□□ 1.71
MRPL28-209ENST00000481453 C11orf95C9JLR9 678 aaPredicted RBP25.75■■□□□ 1.71
MRPL28-209ENST00000481453 ZNF326Q5BKZ1 582 aaKnown RBP25.75■■□□□ 1.71
MRPL28-209ENST00000481453 PRDM15P57071 1507 aaPredicted RBP25.75■■□□□ 1.71
MRPL28-209ENST00000481453 TET3O43151 1660 aa25.74■■□□□ 1.71
MRPL28-209ENST00000481453 POLR1AO95602 1720 aaPredicted RBP25.74■■□□□ 1.71
MRPL28-209ENST00000481453 NEO1Q92859 1461 aa25.74■■□□□ 1.71
MRPL28-209ENST00000481453 MAP3K4Q9Y6R4 1608 aa25.74■■□□□ 1.71
MRPL28-209ENST00000481453 DCAF11Q8TEB1 546 aa25.72■■□□□ 1.71
MRPL28-209ENST00000481453 CCDC7Q96M83 1385 aa25.72■■□□□ 1.71
MRPL28-209ENST00000481453 A2MP01023 1474 aa25.71■■□□□ 1.71
MRPL28-209ENST00000481453 MLH3Q9UHC1 1453 aa25.71■■□□□ 1.71
MRPL28-209ENST00000481453 MYT1LQ9UL68 1186 aa25.71■■□□□ 1.71
MRPL28-209ENST00000481453 HECW2Q9P2P5 1572 aa25.7■■□□□ 1.71
MRPL28-209ENST00000481453 USP47Q96K76 1375 aa25.7■■□□□ 1.7
MRPL28-209ENST00000481453 GLI2P10070 1586 aa25.69■■□□□ 1.7
MRPL28-209ENST00000481453 KIF3BO15066 747 aa25.69■■□□□ 1.7
MRPL28-209ENST00000481453 KDM2AQ9Y2K7 1162 aa25.69■■□□□ 1.7
MRPL28-209ENST00000481453 TRPM2O94759 1503 aa25.68■■□□□ 1.7
MRPL28-209ENST00000481453 SPHKAPQ2M3C7 1700 aa25.68■■□□□ 1.7
MRPL28-209ENST00000481453 FRMPD1Q5SYB0 1578 aa25.68■■□□□ 1.7
MRPL28-209ENST00000481453 PTPRTO14522 1441 aa25.68■■□□□ 1.7
MRPL28-209ENST00000481453 PRAG1Q86YV5 1406 aa25.68■■□□□ 1.7
MRPL28-209ENST00000481453 BCORL1Q5H9F3 1711 aa25.67■■□□□ 1.7
MRPL28-209ENST00000481453 TRPM1Q7Z4N2 1603 aa25.66■■□□□ 1.7
MRPL28-209ENST00000481453 RNF17Q9BXT8 1623 aaKnown RBP25.66■■□□□ 1.7
MRPL28-209ENST00000481453 ANP32CO43423 234 aa25.65■■□□□ 1.7
MRPL28-209ENST00000481453 KANK1Q14678 1352 aa25.65■■□□□ 1.7
MRPL28-209ENST00000481453 ABCA6Q8N139 1617 aa25.65■■□□□ 1.7
MRPL28-209ENST00000481453 CNTLNQ9NXG0 1405 aa25.65■■□□□ 1.7
MRPL28-209ENST00000481453 KIF7Q2M1P5 1343 aa25.64■■□□□ 1.69
MRPL28-209ENST00000481453 RGL3Q3MIN7 710 aa25.63■■□□□ 1.69
MRPL28-209ENST00000481453 CLTCL1P53675 1640 aa25.62■■□□□ 1.69
MRPL28-209ENST00000481453 CEP152O94986 1710 aa25.61■■□□□ 1.69
MRPL28-209ENST00000481453 RICTORQ6R327 1708 aa25.61■■□□□ 1.69
MRPL28-209ENST00000481453 CCER2I3L3R5 266 aa25.61■■□□□ 1.69
MRPL28-209ENST00000481453 EFCAB6Q5THR3 1501 aa25.6■■□□□ 1.69
MRPL28-209ENST00000481453 DIP2BQ9P265 1576 aa25.6■■□□□ 1.69
MRPL28-209ENST00000481453 LMTK2Q8IWU2 1503 aa25.59■■□□□ 1.69
MRPL28-209ENST00000481453 CARD11Q9BXL7 1154 aa25.59■■□□□ 1.69
MRPL28-209ENST00000481453 PPRC1Q5VV67 1664 aaKnown RBP25.58■■□□□ 1.69
MRPL28-209ENST00000481453 RAPGEF3O95398 923 aa25.57■■□□□ 1.68
MRPL28-209ENST00000481453 ROCK2O75116 1388 aaKnown RBP25.56■■□□□ 1.68
MRPL28-209ENST00000481453 DIP2CQ9Y2E4 1556 aa25.56■■□□□ 1.68
MRPL28-209ENST00000481453 LAMC1P11047 1609 aa25.54■■□□□ 1.68
MRPL28-209ENST00000481453 GPRASP1Q5JY77 1395 aa25.54■■□□□ 1.68
MRPL28-209ENST00000481453 NEURL4Q96JN8 1562 aa25.5■■□□□ 1.67
MRPL28-209ENST00000481453 MADDQ8WXG6 1647 aa25.5■■□□□ 1.67
MRPL28-209ENST00000481453 NBPF1Q3BBV0 1214 aa25.49■■□□□ 1.67
MRPL28-209ENST00000481453 UGGT1Q9NYU2 1555 aa25.49■■□□□ 1.67
MRPL28-209ENST00000481453 FAM69CQ0P6D2 419 aa25.48■■□□□ 1.67
MRPL28-209ENST00000481453 ARID4BQ4LE39 1312 aaPredicted RBP25.48■■□□□ 1.67
MRPL28-209ENST00000481453 ST20-MTHFSA0A0A6YYL1 179 aa25.47■■□□□ 1.67
MRPL28-209ENST00000481453 ABCC3O15438 1527 aa25.45■■□□□ 1.66
MRPL28-209ENST00000481453 YEATS2Q9ULM3 1422 aa25.45■■□□□ 1.66
MRPL28-209ENST00000481453 ZMYM4Q5VZL5 1548 aa25.44■■□□□ 1.66
MRPL28-209ENST00000481453 NPATQ14207 1427 aa25.43■■□□□ 1.66
MRPL28-209ENST00000481453 TSPOAP1O95153 1857 aa25.41■■□□□ 1.66
MRPL28-209ENST00000481453 GGT6Q6P531 493 aa25.41■■□□□ 1.66
MRPL28-209ENST00000481453 KIF1BO60333 1816 aa25.4■■□□□ 1.66
MRPL28-209ENST00000481453 MROH2AA6NES4 1674 aa25.4■■□□□ 1.66
MRPL28-209ENST00000481453 CAMSAP1Q5T5Y3 1602 aa25.39■■□□□ 1.65
MRPL28-209ENST00000481453 PRKRIP1Q9H875 184 aaPredicted RBP25.39■■□□□ 1.65
MRPL28-209ENST00000481453 FKBP8Q14318 412 aa25.37■■□□□ 1.65
MRPL28-209ENST00000481453 STAC3Q96MF2 364 aa25.37■■□□□ 1.65
MRPL28-209ENST00000481453 IFT172Q9UG01 1749 aa25.37■■□□□ 1.65
MRPL28-209ENST00000481453 MYT1Q01538 1121 aa25.36■■□□□ 1.65
MRPL28-209ENST00000481453 IQGAP1P46940 1657 aa25.35■■□□□ 1.65
MRPL28-209ENST00000481453 POLR3GLQ9BT43 218 aa25.35■■□□□ 1.65
MRPL28-209ENST00000481453 ADGRB3O60242 1522 aa25.34■■□□□ 1.65
MRPL28-209ENST00000481453 MYOM2P54296 1465 aa25.34■■□□□ 1.65
MRPL28-209ENST00000481453 SIGLEC1Q9BZZ2 1709 aa25.34■■□□□ 1.65
MRPL28-209ENST00000481453 KIF13AQ9H1H9 1805 aa25.34■■□□□ 1.65
MRPL28-209ENST00000481453 BCANQ96GW7 911 aa25.33■■□□□ 1.65
MRPL28-209ENST00000481453 WASHC2CQ9Y4E1 1318 aa25.33■■□□□ 1.65
MRPL28-209ENST00000481453 ZC3H13Q5T200 1668 aaKnown RBP25.33■■□□□ 1.64
MRPL28-209ENST00000481453 KIAA1210Q9ULL0 1709 aa25.32■■□□□ 1.64
MRPL28-209ENST00000481453 TESK2Q96S53 571 aa25.32■■□□□ 1.64
MRPL28-209ENST00000481453 COL17A1Q9UMD9 1497 aaPredicted RBP25.31■■□□□ 1.64
MRPL28-209ENST00000481453 NEFLP07196 543 aa25.31■■□□□ 1.64
MRPL28-209ENST00000481453 CFAP65Q6ZU64 1925 aaKnown RBP25.31■■□□□ 1.64
MRPL28-209ENST00000481453 TSHZ2Q9NRE2 1034 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms