RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 PPP1R3GB7ZBB8 358 aa9.28□□□□□ -0.92
CBX3-207ENST00000481300 DDX12PQ92771 950 aa9.28□□□□□ -0.92
CBX3-207ENST00000481300 KCTD12Q96CX2 325 aaKnown RBP9.27□□□□□ -0.93
CBX3-207ENST00000481300 STAC3Q96MF2 364 aa9.27□□□□□ -0.93
CBX3-207ENST00000481300 EPAS1Q99814 870 aa9.27□□□□□ -0.93
CBX3-207ENST00000481300 HCSTQ9UBK5 93 aa9.27□□□□□ -0.93
CBX3-207ENST00000481300 WDR70Q9NW82 654 aa9.26□□□□□ -0.93
CBX3-207ENST00000481300 ARIH1Q9Y4X5 557 aaPredicted RBP9.26□□□□□ -0.93
CBX3-207ENST00000481300 PROX2Q3B8N5 592 aa9.25□□□□□ -0.93
CBX3-207ENST00000481300 TSHZ2Q9NRE2 1034 aa9.25□□□□□ -0.93
CBX3-207ENST00000481300 SPDYE16A6NNV3 312 aaPredicted RBP9.24□□□□□ -0.93
CBX3-207ENST00000481300 C6orf132Q5T0Z8 1188 aa9.24□□□□□ -0.93
CBX3-207ENST00000481300 RBM33Q96EV2 1170 aaKnown RBP9.24□□□□□ -0.93
CBX3-207ENST00000481300 NBR1Q14596 966 aa9.22□□□□□ -0.93
CBX3-207ENST00000481300 VSIG10Q8N0Z9 540 aa9.21□□□□□ -0.94
CBX3-207ENST00000481300 MRPL50Q8N5N7 158 aaKnown RBP9.21□□□□□ -0.94
CBX3-207ENST00000481300 RABGEF1Q9UJ41 708 aa9.21□□□□□ -0.94
CBX3-207ENST00000481300 PRIM1P49642 420 aaKnown RBP9.2□□□□□ -0.94
CBX3-207ENST00000481300 EN1Q05925 392 aaPredicted RBP9.2□□□□□ -0.94
CBX3-207ENST00000481300 NBPF3Q9H094 633 aa9.2□□□□□ -0.94
CBX3-207ENST00000481300 TSR1Q2NL82 804 aaKnown RBP9.19□□□□□ -0.94
CBX3-207ENST00000481300 THSD4Q6ZMP0 1018 aa9.18□□□□□ -0.94
CBX3-207ENST00000481300 GOLGA8CPA6NN73 597 aa9.17□□□□□ -0.94
CBX3-207ENST00000481300 MAP3K7O43318 606 aa9.17□□□□□ -0.94
CBX3-207ENST00000481300 PTPN5P54829 565 aa9.17□□□□□ -0.94
CBX3-207ENST00000481300 WNT2BQ93097 391 aa9.17□□□□□ -0.94
CBX3-207ENST00000481300 PLA2G2EQ9NZK7 142 aa9.17□□□□□ -0.94
CBX3-207ENST00000481300 KIAA1468Q9P260 1216 aa9.17□□□□□ -0.94
CBX3-207ENST00000481300 GRXCR2A6NFK2 248 aa9.16□□□□□ -0.94
CBX3-207ENST00000481300 TRIM6-TRIM34B2RNG4 842 aa9.15□□□□□ -0.94
CBX3-207ENST00000481300 ONECUT3O60422 494 aaPredicted RBP9.15□□□□□ -0.94
CBX3-207ENST00000481300 OSBPP22059 807 aa9.13□□□□□ -0.95
CBX3-207ENST00000481300 SEPT9Q9UHD8 586 aaPredicted RBP9.13□□□□□ -0.95
CBX3-207ENST00000481300 LAPTM4BQ86VI4 370 aa9.12□□□□□ -0.95
CBX3-207ENST00000481300 KCNV2Q8TDN2 545 aa9.12□□□□□ -0.95
CBX3-207ENST00000481300 TSKSQ9UJT2 592 aa9.12□□□□□ -0.95
CBX3-207ENST00000481300 ANKK1Q8NFD2 765 aa9.1□□□□□ -0.95
CBX3-207ENST00000481300 ZFRQ96KR1 1074 aaKnown RBP9.1□□□□□ -0.95
CBX3-207ENST00000481300 CDHR5Q9HBB8 845 aa9.1□□□□□ -0.95
CBX3-207ENST00000481300 BCAMP50895 628 aa9.09□□□□□ -0.95
CBX3-207ENST00000481300 ARHGEF1Q92888 912 aaKnown RBP9.09□□□□□ -0.95
CBX3-207ENST00000481300 FAM198AQ9UFP1 575 aa9.09□□□□□ -0.95
CBX3-207ENST00000481300 KDM2AQ9Y2K7 1162 aa9.09□□□□□ -0.95
CBX3-207ENST00000481300 CDCA7LQ96GN5 454 aa9.08□□□□□ -0.96
CBX3-207ENST00000481300 SOWAHBA6NEL2 793 aa9.07□□□□□ -0.96
CBX3-207ENST00000481300 PRSS12P56730 875 aa9.07□□□□□ -0.96
CBX3-207ENST00000481300 FAM98CQ17RN3 349 aaKnown RBP9.07□□□□□ -0.96
CBX3-207ENST00000481300 C3orf80F5H4A9 247 aa9.06□□□□□ -0.96
CBX3-207ENST00000481300 MLLT3P42568 568 aaPredicted RBP9.06□□□□□ -0.96
CBX3-207ENST00000481300 PACS2Q86VP3 889 aa9.06□□□□□ -0.96
CBX3-207ENST00000481300 CERKQ8TCT0 537 aa9.06□□□□□ -0.96
CBX3-207ENST00000481300 SMAPO00193 183 aa9.04□□□□□ -0.96
CBX3-207ENST00000481300 NPDC1Q9NQX5 325 aaPredicted RBP9.04□□□□□ -0.96
CBX3-207ENST00000481300 WBP1LQ9NX94 342 aa9.02□□□□□ -0.97
CBX3-207ENST00000481300 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.01□□□□□ -0.97
CBX3-207ENST00000481300 IFFO2Q5TF58 517 aa9□□□□□ -0.97
CBX3-207ENST00000481300 TTC13Q8NBP0 860 aa9□□□□□ -0.97
CBX3-207ENST00000481300 TATDN2Q93075 761 aa9□□□□□ -0.97
CBX3-207ENST00000481300 BCANQ96GW7 911 aa9□□□□□ -0.97
CBX3-207ENST00000481300 RBM27Q9P2N5 1060 aaKnown RBP9□□□□□ -0.97
CBX3-207ENST00000481300 P3H3Q8IVL6 736 aa8.99□□□□□ -0.97
CBX3-207ENST00000481300 LRCH3Q96II8 777 aa8.99□□□□□ -0.97
CBX3-207ENST00000481300 PNMA3Q9UL41 463 aa8.99□□□□□ -0.97
CBX3-207ENST00000481300 NBPF26B4DH59 902 aa8.98□□□□□ -0.97
CBX3-207ENST00000481300 PADI6Q6TGC4 694 aa8.98□□□□□ -0.97
CBX3-207ENST00000481300 TSR3Q9UJK0 312 aaKnown RBP8.98□□□□□ -0.97
CBX3-207ENST00000481300 HPS5Q9UPZ3 1129 aa8.98□□□□□ -0.97
CBX3-207ENST00000481300 NYAP1Q6ZVC0 841 aa8.97□□□□□ -0.97
CBX3-207ENST00000481300 NUDT18Q6ZVK8 323 aa8.97□□□□□ -0.97
CBX3-207ENST00000481300 SAMD7Q7Z3H4 446 aa8.97□□□□□ -0.97
CBX3-207ENST00000481300 SEMA3EO15041 775 aa8.96□□□□□ -0.98
CBX3-207ENST00000481300 ITGBL1O95965 494 aaPredicted RBP8.96□□□□□ -0.98
CBX3-207ENST00000481300 A0A0G2JS52 829 aa8.94□□□□□ -0.98
CBX3-207ENST00000481300 PTGDRQ13258 359 aa8.94□□□□□ -0.98
CBX3-207ENST00000481300 PPP4CP60510 307 aa8.91□□□□□ -0.98
CBX3-207ENST00000481300 EYA1Q99502 592 aa8.91□□□□□ -0.98
CBX3-207ENST00000481300 NUTM2FA1L443 756 aa8.89□□□□□ -0.99
CBX3-207ENST00000481300 TESPA1A2RU30 521 aaPredicted RBP8.88□□□□□ -0.99
CBX3-207ENST00000481300 KCNC4Q03721 635 aa8.88□□□□□ -0.99
CBX3-207ENST00000481300 SWT1Q5T5J6 900 aaKnown RBP8.88□□□□□ -0.99
CBX3-207ENST00000481300 RNF40O75150 1001 aa8.86□□□□□ -0.99
CBX3-207ENST00000481300 ADGRG1Q9Y653 693 aa8.86□□□□□ -0.99
CBX3-207ENST00000481300 RGS20O76081 388 aa8.85□□□□□ -0.99
CBX3-207ENST00000481300 HDGFP51858 240 aaKnown RBP8.85□□□□□ -0.99
CBX3-207ENST00000481300 FAM161AQ3B820 660 aa8.85□□□□□ -0.99
CBX3-207ENST00000481300 TJAP1Q5JTD0 557 aa8.85□□□□□ -0.99
CBX3-207ENST00000481300 FCHSD2O94868 740 aa8.84□□□□□ -0.99
CBX3-207ENST00000481300 APLP1P51693 650 aa8.84□□□□□ -0.99
CBX3-207ENST00000481300 RBM26Q5T8P6 1007 aaKnown RBP8.84□□□□□ -0.99
CBX3-207ENST00000481300 SLF2Q8IX21 1173 aa8.82□□□□□ -1
CBX3-207ENST00000481300 MTRQ99707 1265 aa8.82□□□□□ -1
CBX3-207ENST00000481300 RBM46Q8TBY0 533 aaKnown RBP8.81□□□□□ -1
CBX3-207ENST00000481300 GPR37O15354 613 aa8.8□□□□□ -1
CBX3-207ENST00000481300 DNAJB2P25686 324 aa8.8□□□□□ -1
CBX3-207ENST00000481300 TMEM134Q9H6X4 195 aa8.8□□□□□ -1
CBX3-207ENST00000481300 RCCD1A6NED2 376 aa8.79□□□□□ -1
CBX3-207ENST00000481300 IL21Q9HBE4 155 aa8.79□□□□□ -1
CBX3-207ENST00000481300 HIC1Q14526 733 aa8.78□□□□□ -1
CBX3-207ENST00000481300 SMYD5Q6GMV2 418 aa8.78□□□□□ -1
CBX3-207ENST00000481300 ZNF516Q92618 1163 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms