RNA–Protein interactions for RNA: ENST00000481163.1

PRDM1-206, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-206ENST00000481163 TCOF1Q13428 1488 aaKnown RBP10.23□□□□□ -0.77
PRDM1-206ENST00000481163 PLXNC1O60486 1568 aa10.23□□□□□ -0.77
PRDM1-206ENST00000481163 MAST1Q9Y2H9 1570 aa10.23□□□□□ -0.77
PRDM1-206ENST00000481163 SETD1BQ9UPS6 1966 aaKnown RBP10.23□□□□□ -0.77
PRDM1-206ENST00000481163 WASHC2CQ9Y4E1 1318 aa10.23□□□□□ -0.77
PRDM1-206ENST00000481163 ZMYM3Q14202 1370 aa10.22□□□□□ -0.77
PRDM1-206ENST00000481163 KIF15Q9NS87 1388 aa10.22□□□□□ -0.77
PRDM1-206ENST00000481163 CEP152O94986 1710 aa10.21□□□□□ -0.78
PRDM1-206ENST00000481163 PREX1Q8TCU6 1659 aa10.2□□□□□ -0.78
PRDM1-206ENST00000481163 ANKRD30AQ9BXX3 1397 aa10.2□□□□□ -0.78
PRDM1-206ENST00000481163 MROH2AA6NES4 1674 aa10.19□□□□□ -0.78
PRDM1-206ENST00000481163 DUOX2Q9NRD8 1548 aa10.19□□□□□ -0.78
PRDM1-206ENST00000481163 CNTLNQ9NXG0 1405 aa10.19□□□□□ -0.78
PRDM1-206ENST00000481163 FBXO31Q5XUX0 539 aaPredicted RBP10.19□□□□□ -0.78
PRDM1-206ENST00000481163 SHANK2Q9UPX8 1470 aa10.18□□□□□ -0.78
PRDM1-206ENST00000481163 LMTK3Q96Q04 1460 aa10.17□□□□□ -0.78
PRDM1-206ENST00000481163 PPP6R1Q9UPN7 881 aa10.17□□□□□ -0.78
PRDM1-206ENST00000481163 PTPRKQ15262 1439 aa10.16□□□□□ -0.78
PRDM1-206ENST00000481163 NCOA1Q15788 1441 aa10.16□□□□□ -0.78
PRDM1-206ENST00000481163 UHRF1BP1Q6BDS2 1440 aa10.16□□□□□ -0.78
PRDM1-206ENST00000481163 EIF2AK4Q9P2K8 1649 aaKnown RBP10.16□□□□□ -0.78
PRDM1-206ENST00000481163 KDM5DQ9BY66 1539 aa10.15□□□□□ -0.78
PRDM1-206ENST00000481163 RNF17Q9BXT8 1623 aaKnown RBP10.15□□□□□ -0.79
PRDM1-206ENST00000481163 KANK1Q14678 1352 aa10.14□□□□□ -0.79
PRDM1-206ENST00000481163 CAMSAP1Q5T5Y3 1602 aa10.13□□□□□ -0.79
PRDM1-206ENST00000481163 ERBINQ96RT1 1412 aa10.13□□□□□ -0.79
PRDM1-206ENST00000481163 ADGRL2O95490 1459 aa10.12□□□□□ -0.79
PRDM1-206ENST00000481163 MROH1Q8NDA8 1641 aa10.12□□□□□ -0.79
PRDM1-206ENST00000481163 ANKRD50Q9ULJ7 1429 aa10.12□□□□□ -0.79
PRDM1-206ENST00000481163 ABCC3O15438 1527 aa10.12□□□□□ -0.79
PRDM1-206ENST00000481163 ZC3H13Q5T200 1668 aaKnown RBP10.12□□□□□ -0.79
PRDM1-206ENST00000481163 MYO3AQ8NEV4 1616 aa10.11□□□□□ -0.79
PRDM1-206ENST00000481163 TNRQ92752 1358 aa10.11□□□□□ -0.79
PRDM1-206ENST00000481163 STRCQ7RTU9 1775 aa10.11□□□□□ -0.79
PRDM1-206ENST00000481163 NCKAP5LQ9HCH0 1330 aa10.1□□□□□ -0.79
PRDM1-206ENST00000481163 NPATQ14207 1427 aa10.1□□□□□ -0.79
PRDM1-206ENST00000481163 RRBP1Q9P2E9 1410 aaKnown RBP10.1□□□□□ -0.79
PRDM1-206ENST00000481163 PZPP20742 1482 aa10.1□□□□□ -0.79
PRDM1-206ENST00000481163 DEPDC5O75140 1603 aa10.09□□□□□ -0.79
PRDM1-206ENST00000481163 TRIM52Q96A61 297 aa10.09□□□□□ -0.79
PRDM1-206ENST00000481163 PRDM15P57071 1507 aaPredicted RBP10.08□□□□□ -0.8
PRDM1-206ENST00000481163 STAG3Q9UJ98 1225 aa10.08□□□□□ -0.8
PRDM1-206ENST00000481163 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.08□□□□□ -0.8
PRDM1-206ENST00000481163 CEP170BQ9Y4F5 1589 aaPredicted RBP10.08□□□□□ -0.8
PRDM1-206ENST00000481163 ROCK1Q13464 1354 aa10.07□□□□□ -0.8
PRDM1-206ENST00000481163 FAM135AQ9P2D6 1515 aa10.07□□□□□ -0.8
PRDM1-206ENST00000481163 ZNF142P52746 1687 aaPredicted RBP10.06□□□□□ -0.8
PRDM1-206ENST00000481163 NUP155O75694 1391 aa10.06□□□□□ -0.8
PRDM1-206ENST00000481163 A2ML1A8K2U0 1454 aa10.05□□□□□ -0.8
PRDM1-206ENST00000481163 ERVK-7P63135 1459 aa10.05□□□□□ -0.8
PRDM1-206ENST00000481163 CHGAP10645 457 aaKnown RBP10.05□□□□□ -0.8
PRDM1-206ENST00000481163 DMRT2Q9Y5R5 561 aa10.05□□□□□ -0.8
PRDM1-206ENST00000481163 UGGT1Q9NYU2 1555 aa10.05□□□□□ -0.8
PRDM1-206ENST00000481163 GCC2Q8IWJ2 1684 aa10.04□□□□□ -0.8
PRDM1-206ENST00000481163 THEMISQ8N1K5 641 aaPredicted RBP10.04□□□□□ -0.8
PRDM1-206ENST00000481163 UNC13BO14795 1591 aa10.04□□□□□ -0.8
PRDM1-206ENST00000481163 TET3O43151 1660 aa10.03□□□□□ -0.8
PRDM1-206ENST00000481163 MYO5BQ9ULV0 1848 aa10.03□□□□□ -0.8
PRDM1-206ENST00000481163 POLR1AO95602 1720 aaPredicted RBP10.03□□□□□ -0.8
PRDM1-206ENST00000481163 SPATA31D1Q6ZQQ2 1576 aa10.03□□□□□ -0.8
PRDM1-206ENST00000481163 E9PCH4 1651 aa10.02□□□□□ -0.8
PRDM1-206ENST00000481163 VWDEQ8N2E2 1590 aa10.02□□□□□ -0.81
PRDM1-206ENST00000481163 NAIPQ13075 1403 aa10.02□□□□□ -0.81
PRDM1-206ENST00000481163 IDI1Q13907 227 aa10.02□□□□□ -0.81
PRDM1-206ENST00000481163 ANKLE2Q86XL3 938 aa10.02□□□□□ -0.81
PRDM1-206ENST00000481163 PIK3C2BO00750 1634 aa10.02□□□□□ -0.81
PRDM1-206ENST00000481163 NLRP1Q9C000 1473 aa10.02□□□□□ -0.81
PRDM1-206ENST00000481163 EFCAB6Q5THR3 1501 aa10.02□□□□□ -0.81
PRDM1-206ENST00000481163 UBR1Q8IWV7 1749 aa10.02□□□□□ -0.81
PRDM1-206ENST00000481163 ARHGAP31Q2M1Z3 1444 aa10.01□□□□□ -0.81
PRDM1-206ENST00000481163 IQGAP3Q86VI3 1631 aa10.01□□□□□ -0.81
PRDM1-206ENST00000481163 BCANQ96GW7 911 aa10.01□□□□□ -0.81
PRDM1-206ENST00000481163 LMTK2Q8IWU2 1503 aa10.01□□□□□ -0.81
PRDM1-206ENST00000481163 PKD2Q13563 968 aa10□□□□□ -0.81
PRDM1-206ENST00000481163 SYNMO15061 1565 aa10□□□□□ -0.81
PRDM1-206ENST00000481163 TXNDC2Q86VQ3 553 aa9.99□□□□□ -0.81
PRDM1-206ENST00000481163 NUTM2DQ5VT03 806 aaPredicted RBP9.98□□□□□ -0.81
PRDM1-206ENST00000481163 SLC4A1APQ9BWU0 796 aaKnown RBP9.98□□□□□ -0.81
PRDM1-206ENST00000481163 EID1Q9Y6B2 187 aa9.98□□□□□ -0.81
PRDM1-206ENST00000481163 HFM1A2PYH4 1435 aa9.98□□□□□ -0.81
PRDM1-206ENST00000481163 PTPRTO14522 1441 aa9.98□□□□□ -0.81
PRDM1-206ENST00000481163 PLA2R1Q13018 1463 aa9.98□□□□□ -0.81
PRDM1-206ENST00000481163 SPHKAPQ2M3C7 1700 aa9.97□□□□□ -0.81
PRDM1-206ENST00000481163 LTKP29376 864 aa9.97□□□□□ -0.81
PRDM1-206ENST00000481163 ILDR1Q86SU0 546 aaPredicted RBP9.97□□□□□ -0.81
PRDM1-206ENST00000481163 CERKQ8TCT0 537 aa9.97□□□□□ -0.81
PRDM1-206ENST00000481163 SLC52A1Q9NWF4 448 aa9.97□□□□□ -0.81
PRDM1-206ENST00000481163 ZNF335Q9H4Z2 1342 aaPredicted RBP9.97□□□□□ -0.81
PRDM1-206ENST00000481163 PPP1R15AO75807 674 aaPredicted RBP9.96□□□□□ -0.82
PRDM1-206ENST00000481163 ZNF326Q5BKZ1 582 aaKnown RBP9.96□□□□□ -0.82
PRDM1-206ENST00000481163 NOS1P29475 1434 aa9.96□□□□□ -0.82
PRDM1-206ENST00000481163 SETD5Q9C0A6 1442 aa9.95□□□□□ -0.82
PRDM1-206ENST00000481163 RPRD2Q5VT52 1461 aaKnown RBP9.95□□□□□ -0.82
PRDM1-206ENST00000481163 NEURL4Q96JN8 1562 aa9.95□□□□□ -0.82
PRDM1-206ENST00000481163 IQGAP1P46940 1657 aa9.95□□□□□ -0.82
PRDM1-206ENST00000481163 KIF1BO60333 1816 aa9.94□□□□□ -0.82
PRDM1-206ENST00000481163 NPHP4O75161 1426 aaPredicted RBP9.94□□□□□ -0.82
PRDM1-206ENST00000481163 SLC26A8Q96RN1 970 aa9.93□□□□□ -0.82
PRDM1-206ENST00000481163 ADGRB3O60242 1522 aa9.92□□□□□ -0.82
PRDM1-206ENST00000481163 SCAF11Q99590 1463 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms