RNA–Protein interactions for RNA: ENST00000481003.1

PSMD1-210, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 2

Gene PSMD1, Length 352 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-210ENST00000481003 KIAA1468Q9P260 1216 aa12.88□□□□□ -0.35
PSMD1-210ENST00000481003 PRKD2Q9BZL6 878 aa12.87□□□□□ -0.35
PSMD1-210ENST00000481003 SEPT9Q9UHD8 586 aaPredicted RBP12.87□□□□□ -0.35
PSMD1-210ENST00000481003 PCDHGA10Q9Y5H3 936 aa12.85□□□□□ -0.35
PSMD1-210ENST00000481003 MAP3K9P80192 1104 aa12.84□□□□□ -0.35
PSMD1-210ENST00000481003 HPS5Q9UPZ3 1129 aa12.84□□□□□ -0.35
PSMD1-210ENST00000481003 TSR3Q9UJK0 312 aaKnown RBP12.83□□□□□ -0.36
PSMD1-210ENST00000481003 ZNF775Q96BV0 537 aaPredicted RBP12.82□□□□□ -0.36
PSMD1-210ENST00000481003 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.82□□□□□ -0.36
PSMD1-210ENST00000481003 HS6ST3Q8IZP7 471 aa12.8□□□□□ -0.36
PSMD1-210ENST00000481003 LRCH3Q96II8 777 aa12.8□□□□□ -0.36
PSMD1-210ENST00000481003 PDE4AP27815 886 aa12.79□□□□□ -0.36
PSMD1-210ENST00000481003 NCKAP5LQ9HCH0 1330 aa12.79□□□□□ -0.36
PSMD1-210ENST00000481003 FBXW7Q969H0 707 aa12.77□□□□□ -0.37
PSMD1-210ENST00000481003 FAM98CQ17RN3 349 aaKnown RBP12.76□□□□□ -0.37
PSMD1-210ENST00000481003 TYW1BQ6NUM6 668 aa12.76□□□□□ -0.37
PSMD1-210ENST00000481003 ONECUT3O60422 494 aaPredicted RBP12.74□□□□□ -0.37
PSMD1-210ENST00000481003 V9GY48 417 aaPredicted RBP12.73□□□□□ -0.37
PSMD1-210ENST00000481003 PDZRN3Q9UPQ7 1066 aa12.72□□□□□ -0.37
PSMD1-210ENST00000481003 TRIM6-TRIM34B2RNG4 842 aa12.71□□□□□ -0.37
PSMD1-210ENST00000481003 PHF14O94880 888 aa12.71□□□□□ -0.37
PSMD1-210ENST00000481003 PPP1R18Q6NYC8 613 aa12.71□□□□□ -0.37
PSMD1-210ENST00000481003 DDX27Q96GQ7 796 aaKnown RBP12.71□□□□□ -0.37
PSMD1-210ENST00000481003 LARP6Q9BRS8 491 aaKnown RBP12.7□□□□□ -0.38
PSMD1-210ENST00000481003 PPP4CP60510 307 aa12.69□□□□□ -0.38
PSMD1-210ENST00000481003 TJAP1Q5JTD0 557 aa12.69□□□□□ -0.38
PSMD1-210ENST00000481003 CHGAP10645 457 aaKnown RBP12.68□□□□□ -0.38
PSMD1-210ENST00000481003 C6orf132Q5T0Z8 1188 aa12.68□□□□□ -0.38
PSMD1-210ENST00000481003 EMILIN3Q9NT22 766 aa12.67□□□□□ -0.38
PSMD1-210ENST00000481003 RYDENQ9NUL5 291 aaKnown RBP12.67□□□□□ -0.38
PSMD1-210ENST00000481003 NKX1-1Q15270 411 aaPredicted RBP12.66□□□□□ -0.38
PSMD1-210ENST00000481003 MTRQ99707 1265 aa12.63□□□□□ -0.39
PSMD1-210ENST00000481003 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.63□□□□□ -0.39
PSMD1-210ENST00000481003 IL21Q9HBE4 155 aa12.62□□□□□ -0.39
PSMD1-210ENST00000481003 RBM33Q96EV2 1170 aaKnown RBP12.6□□□□□ -0.39
PSMD1-210ENST00000481003 EPAS1Q99814 870 aa12.59□□□□□ -0.39
PSMD1-210ENST00000481003 ZNF516Q92618 1163 aa12.57□□□□□ -0.4
PSMD1-210ENST00000481003 MFSD10Q14728 455 aa12.56□□□□□ -0.4
PSMD1-210ENST00000481003 PACS2Q86VP3 889 aa12.56□□□□□ -0.4
PSMD1-210ENST00000481003 SAMD7Q7Z3H4 446 aa12.54□□□□□ -0.4
PSMD1-210ENST00000481003 TSKSQ9UJT2 592 aa12.53□□□□□ -0.4
PSMD1-210ENST00000481003 DNAJC5Q9H3Z4 198 aa12.51□□□□□ -0.41
PSMD1-210ENST00000481003 SMAPO00193 183 aa12.5□□□□□ -0.41
PSMD1-210ENST00000481003 NKX2-3Q8TAU0 364 aa12.5□□□□□ -0.41
PSMD1-210ENST00000481003 GGCXP38435 758 aa12.49□□□□□ -0.41
PSMD1-210ENST00000481003 PKDCCQ504Y2 493 aa12.49□□□□□ -0.41
PSMD1-210ENST00000481003 RNF40O75150 1001 aa12.48□□□□□ -0.41
PSMD1-210ENST00000481003 POTECB2RU33 542 aa12.47□□□□□ -0.41
PSMD1-210ENST00000481003 DDX12PQ92771 950 aa12.46□□□□□ -0.41
PSMD1-210ENST00000481003 MYT1Q01538 1121 aa12.45□□□□□ -0.42
PSMD1-210ENST00000481003 DPYSL4O14531 572 aa12.43□□□□□ -0.42
PSMD1-210ENST00000481003 TSR1Q2NL82 804 aaKnown RBP12.43□□□□□ -0.42
PSMD1-210ENST00000481003 MAP3K7O43318 606 aa12.42□□□□□ -0.42
PSMD1-210ENST00000481003 APLP1P51693 650 aa12.42□□□□□ -0.42
PSMD1-210ENST00000481003 TRIM67Q6ZTA4 783 aa12.42□□□□□ -0.42
PSMD1-210ENST00000481003 COPS2P61201 443 aa12.41□□□□□ -0.42
PSMD1-210ENST00000481003 DGAT1O75907 488 aa12.39□□□□□ -0.43
PSMD1-210ENST00000481003 NBR1Q14596 966 aa12.39□□□□□ -0.43
PSMD1-210ENST00000481003 TREML4Q6UXN2 200 aa12.39□□□□□ -0.43
PSMD1-210ENST00000481003 EN1Q05925 392 aaPredicted RBP12.38□□□□□ -0.43
PSMD1-210ENST00000481003 CDCA7LQ96GN5 454 aa12.38□□□□□ -0.43
PSMD1-210ENST00000481003 TMUB1Q9BVT8 246 aa12.37□□□□□ -0.43
PSMD1-210ENST00000481003 PNMA3Q9UL41 463 aa12.37□□□□□ -0.43
PSMD1-210ENST00000481003 GTPBP6O43824 516 aaPredicted RBP12.36□□□□□ -0.43
PSMD1-210ENST00000481003 SLC19A1P41440 591 aa12.36□□□□□ -0.43
PSMD1-210ENST00000481003 HDGFP51858 240 aaKnown RBP12.36□□□□□ -0.43
PSMD1-210ENST00000481003 FAM198AQ9UFP1 575 aa12.35□□□□□ -0.43
PSMD1-210ENST00000481003 NBPF26B4DH59 902 aa12.34□□□□□ -0.43
PSMD1-210ENST00000481003 C3orf80F5H4A9 247 aa12.34□□□□□ -0.43
PSMD1-210ENST00000481003 TATDN2Q93075 761 aa12.34□□□□□ -0.43
PSMD1-210ENST00000481003 FAM187AA6NFU0 413 aa12.33□□□□□ -0.44
PSMD1-210ENST00000481003 PRSS12P56730 875 aa12.33□□□□□ -0.44
PSMD1-210ENST00000481003 LCE2AQ5TA79 106 aaPredicted RBP12.32□□□□□ -0.44
PSMD1-210ENST00000481003 ZPR1O75312 459 aa12.29□□□□□ -0.44
PSMD1-210ENST00000481003 CAMK2BQ13554 666 aa12.29□□□□□ -0.44
PSMD1-210ENST00000481003 SPRYD7Q5W111 196 aa12.29□□□□□ -0.44
PSMD1-210ENST00000481003 CADPS2Q86UW7 1296 aa12.29□□□□□ -0.44
PSMD1-210ENST00000481003 RNF223E7ERA6 249 aa12.28□□□□□ -0.44
PSMD1-210ENST00000481003 PRR20EP86478 221 aa12.28□□□□□ -0.44
PSMD1-210ENST00000481003 PRR20CP86479 221 aa12.28□□□□□ -0.44
PSMD1-210ENST00000481003 PRR20DP86480 221 aa12.28□□□□□ -0.44
PSMD1-210ENST00000481003 PRR20BP86481 221 aa12.28□□□□□ -0.44
PSMD1-210ENST00000481003 PRR20AP86496 221 aa12.28□□□□□ -0.44
PSMD1-210ENST00000481003 EMID1Q96A84 441 aaPredicted RBP12.28□□□□□ -0.44
PSMD1-210ENST00000481003 ST8SIA5O15466 376 aa12.27□□□□□ -0.45
PSMD1-210ENST00000481003 ZNF598Q86UK7 904 aaKnown RBP12.27□□□□□ -0.45
PSMD1-210ENST00000481003 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
PSMD1-210ENST00000481003 TNFRSF10AO00220 468 aa12.26□□□□□ -0.45
PSMD1-210ENST00000481003 NUDT18Q6ZVK8 323 aa12.26□□□□□ -0.45
PSMD1-210ENST00000481003 ZNF697Q5TEC3 545 aa12.24□□□□□ -0.45
PSMD1-210ENST00000481003 CERKQ8TCT0 537 aa12.24□□□□□ -0.45
PSMD1-210ENST00000481003 SLF2Q8IX21 1173 aa12.21□□□□□ -0.45
PSMD1-210ENST00000481003 AAASQ9NRG9 546 aa12.21□□□□□ -0.45
PSMD1-210ENST00000481003 STK17AQ9UEE5 414 aa12.21□□□□□ -0.45
PSMD1-210ENST00000481003 WFS1O76024 890 aa12.2□□□□□ -0.46
PSMD1-210ENST00000481003 SWT1Q5T5J6 900 aaKnown RBP12.2□□□□□ -0.46
PSMD1-210ENST00000481003 PCDHB3Q9Y5E6 796 aa12.19□□□□□ -0.46
PSMD1-210ENST00000481003 PPEF1O14829 653 aaPredicted RBP12.18□□□□□ -0.46
PSMD1-210ENST00000481003 LIAT1Q6ZQX7 453 aa12.18□□□□□ -0.46
PSMD1-210ENST00000481003 GDF9O60383 454 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms