RNA–Protein interactions for RNA: ENST00000480853.1

LSG1-208, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 539 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-208ENST00000480853 CEP170BQ9Y4F5 1589 aaPredicted RBP26.71■■□□□ 1.87
LSG1-208ENST00000480853 LTBP4Q8N2S1 1624 aa26.71■■□□□ 1.87
LSG1-208ENST00000480853 ZNF142P52746 1687 aaPredicted RBP26.69■■□□□ 1.86
LSG1-208ENST00000480853 ZNF335Q9H4Z2 1342 aaPredicted RBP26.67■■□□□ 1.86
LSG1-208ENST00000480853 MIA2Q96PC5 1412 aa26.67■■□□□ 1.86
LSG1-208ENST00000480853 TNRQ92752 1358 aa26.67■■□□□ 1.86
LSG1-208ENST00000480853 APLP2Q06481 763 aa26.66■■□□□ 1.86
LSG1-208ENST00000480853 PKD2Q13563 968 aa26.66■■□□□ 1.86
LSG1-208ENST00000480853 KDM5DQ9BY66 1539 aa26.65■■□□□ 1.86
LSG1-208ENST00000480853 A2ML1A8K2U0 1454 aa26.65■■□□□ 1.86
LSG1-208ENST00000480853 MAST1Q9Y2H9 1570 aa26.64■■□□□ 1.86
LSG1-208ENST00000480853 DNMT1P26358 1616 aaKnown RBP26.64■■□□□ 1.85
LSG1-208ENST00000480853 PZPP20742 1482 aa26.63■■□□□ 1.85
LSG1-208ENST00000480853 PLA2R1Q13018 1463 aa26.63■■□□□ 1.85
LSG1-208ENST00000480853 TCOF1Q13428 1488 aaKnown RBP26.63■■□□□ 1.85
LSG1-208ENST00000480853 RRP7BPQ9NSQ0 103 aa26.6■■□□□ 1.85
LSG1-208ENST00000480853 CFAP65Q6ZU64 1925 aaKnown RBP26.59■■□□□ 1.85
LSG1-208ENST00000480853 ABCC5O15440 1437 aa26.58■■□□□ 1.85
LSG1-208ENST00000480853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.56■■□□□ 1.84
LSG1-208ENST00000480853 RNF17Q9BXT8 1623 aaKnown RBP26.55■■□□□ 1.84
LSG1-208ENST00000480853 PTPN23Q9H3S7 1636 aa26.55■■□□□ 1.84
LSG1-208ENST00000480853 CHIC2Q9UKJ5 165 aa26.55■■□□□ 1.84
LSG1-208ENST00000480853 ABCC3O15438 1527 aa26.55■■□□□ 1.84
LSG1-208ENST00000480853 FAM135AQ9P2D6 1515 aa26.55■■□□□ 1.84
LSG1-208ENST00000480853 MROH1Q8NDA8 1641 aa26.53■■□□□ 1.84
LSG1-208ENST00000480853 KIF15Q9NS87 1388 aa26.51■■□□□ 1.83
LSG1-208ENST00000480853 THEMISQ8N1K5 641 aaPredicted RBP26.51■■□□□ 1.83
LSG1-208ENST00000480853 DUOX2Q9NRD8 1548 aa26.5■■□□□ 1.83
LSG1-208ENST00000480853 ANKLE2Q86XL3 938 aa26.5■■□□□ 1.83
LSG1-208ENST00000480853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.5■■□□□ 1.83
LSG1-208ENST00000480853 FGD6Q6ZV73 1430 aa26.49■■□□□ 1.83
LSG1-208ENST00000480853 CEP152O94986 1710 aa26.49■■□□□ 1.83
LSG1-208ENST00000480853 DAPK1P53355 1430 aa26.48■■□□□ 1.83
LSG1-208ENST00000480853 EIF2AK4Q9P2K8 1649 aaKnown RBP26.48■■□□□ 1.83
LSG1-208ENST00000480853 NEURL4Q96JN8 1562 aa26.48■■□□□ 1.83
LSG1-208ENST00000480853 UBAP1LF5GYI3 381 aa26.46■■□□□ 1.83
LSG1-208ENST00000480853 NLRP1Q9C000 1473 aa26.46■■□□□ 1.83
LSG1-208ENST00000480853 UGGT1Q9NYU2 1555 aa26.46■■□□□ 1.83
LSG1-208ENST00000480853 CROCC2H7BZ55 1655 aa26.45■■□□□ 1.82
LSG1-208ENST00000480853 IQSEC2Q5JU85 1478 aa26.45■■□□□ 1.82
LSG1-208ENST00000480853 ERVK-7P63135 1459 aa26.44■■□□□ 1.82
LSG1-208ENST00000480853 POLR1AO95602 1720 aaPredicted RBP26.44■■□□□ 1.82
LSG1-208ENST00000480853 SPATA31D1Q6ZQQ2 1576 aa26.43■■□□□ 1.82
LSG1-208ENST00000480853 SHANK2Q9UPX8 1470 aa26.42■■□□□ 1.82
LSG1-208ENST00000480853 ZC3H13Q5T200 1668 aaKnown RBP26.42■■□□□ 1.82
LSG1-208ENST00000480853 FAM50AQ14320 339 aaKnown RBP26.39■■□□□ 1.82
LSG1-208ENST00000480853 ERBINQ96RT1 1412 aa26.39■■□□□ 1.81
LSG1-208ENST00000480853 NPHP4O75161 1426 aaPredicted RBP26.38■■□□□ 1.81
LSG1-208ENST00000480853 ANKRD30AQ9BXX3 1397 aa26.35■■□□□ 1.81
LSG1-208ENST00000480853 DISP3Q9P2K9 1392 aa26.34■■□□□ 1.81
LSG1-208ENST00000480853 MED14O60244 1454 aa26.34■■□□□ 1.81
LSG1-208ENST00000480853 PRDM15P57071 1507 aaPredicted RBP26.34■■□□□ 1.81
LSG1-208ENST00000480853 LTKP29376 864 aa26.33■■□□□ 1.81
LSG1-208ENST00000480853 VWDEQ8N2E2 1590 aa26.33■■□□□ 1.8
LSG1-208ENST00000480853 ARHGAP31Q2M1Z3 1444 aa26.32■■□□□ 1.8
LSG1-208ENST00000480853 ILDR2Q71H61 639 aa26.32■■□□□ 1.8
LSG1-208ENST00000480853 DEPDC5O75140 1603 aa26.32■■□□□ 1.8
LSG1-208ENST00000480853 UBR1Q8IWV7 1749 aa26.31■■□□□ 1.8
LSG1-208ENST00000480853 PPARGC1BQ86YN6 1023 aaKnown RBP26.3■■□□□ 1.8
LSG1-208ENST00000480853 PIP4K2BP78356 416 aa26.29■■□□□ 1.8
LSG1-208ENST00000480853 KANK1Q14678 1352 aa26.29■■□□□ 1.8
LSG1-208ENST00000480853 TXNDC2Q86VQ3 553 aa26.28■■□□□ 1.8
LSG1-208ENST00000480853 IDI1Q13907 227 aa26.27■■□□□ 1.8
LSG1-208ENST00000480853 IQGAP1P46940 1657 aa26.27■■□□□ 1.8
LSG1-208ENST00000480853 STRCP1A6NGW2 1772 aa26.26■■□□□ 1.79
LSG1-208ENST00000480853 CPS1P31327 1500 aa26.26■■□□□ 1.79
LSG1-208ENST00000480853 SCAF1Q9H7N4 1312 aaKnown RBP26.26■■□□□ 1.79
LSG1-208ENST00000480853 ADGRL2O95490 1459 aa26.23■■□□□ 1.79
LSG1-208ENST00000480853 PIK3C2BO00750 1634 aa26.21■■□□□ 1.79
LSG1-208ENST00000480853 TOM1O60784 492 aa26.21■■□□□ 1.79
LSG1-208ENST00000480853 HSPA1LP34931 641 aa26.21■■□□□ 1.79
LSG1-208ENST00000480853 STAG3Q9UJ98 1225 aa26.21■■□□□ 1.79
LSG1-208ENST00000480853 SCAF11Q99590 1463 aaKnown RBP26.21■■□□□ 1.79
LSG1-208ENST00000480853 ARHGAP23Q9P227 1491 aa26.21■■□□□ 1.79
LSG1-208ENST00000480853 LMTK2Q8IWU2 1503 aa26.2■■□□□ 1.79
LSG1-208ENST00000480853 SLIT1O75093 1534 aa26.19■■□□□ 1.78
LSG1-208ENST00000480853 ANKRD50Q9ULJ7 1429 aa26.18■■□□□ 1.78
LSG1-208ENST00000480853 EID1Q9Y6B2 187 aa26.17■■□□□ 1.78
LSG1-208ENST00000480853 SYNMO15061 1565 aa26.16■■□□□ 1.78
LSG1-208ENST00000480853 LRRC7Q96NW7 1537 aa26.16■■□□□ 1.78
LSG1-208ENST00000480853 TMEM2Q9UHN6 1383 aa26.16■■□□□ 1.78
LSG1-208ENST00000480853 ALKQ9UM73 1620 aa26.15■■□□□ 1.78
LSG1-208ENST00000480853 NOS1P29475 1434 aa26.14■■□□□ 1.78
LSG1-208ENST00000480853 ITGAEP38570 1179 aa26.14■■□□□ 1.78
LSG1-208ENST00000480853 SENP3Q9H4L4 574 aaPredicted RBP26.14■■□□□ 1.78
LSG1-208ENST00000480853 EFCAB6Q5THR3 1501 aa26.11■■□□□ 1.77
LSG1-208ENST00000480853 SLC26A8Q96RN1 970 aa26.09■■□□□ 1.77
LSG1-208ENST00000480853 SLC52A1Q9NWF4 448 aa26.07■■□□□ 1.76
LSG1-208ENST00000480853 RBM33Q96EV2 1170 aaKnown RBP26.04■■□□□ 1.76
LSG1-208ENST00000480853 XIRP1Q702N8 1843 aaKnown RBP26.02■■□□□ 1.76
LSG1-208ENST00000480853 MYO5BQ9ULV0 1848 aa26.02■■□□□ 1.76
LSG1-208ENST00000480853 TET3O43151 1660 aa26.01■■□□□ 1.75
LSG1-208ENST00000480853 KDM5AP29375 1690 aaKnown RBP26.01■■□□□ 1.75
LSG1-208ENST00000480853 ROCK1Q13464 1354 aa26.01■■□□□ 1.75
LSG1-208ENST00000480853 BCANQ96GW7 911 aa26.01■■□□□ 1.75
LSG1-208ENST00000480853 ADGRB3O60242 1522 aa26■■□□□ 1.75
LSG1-208ENST00000480853 SOCS7O14512 581 aa25.99■■□□□ 1.75
LSG1-208ENST00000480853 CHGAP10645 457 aaKnown RBP25.99■■□□□ 1.75
LSG1-208ENST00000480853 KCNA6P17658 529 aa25.99■■□□□ 1.75
LSG1-208ENST00000480853 RPRD2Q5VT52 1461 aaKnown RBP25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms