RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 IQGAP3Q86VI3 1631 aa21.62■■□□□ 1.05
SNRNP200-205ENST00000480835 DIP2CQ9Y2E4 1556 aa21.61■■□□□ 1.05
SNRNP200-205ENST00000480835 BCORL1Q5H9F3 1711 aa21.61■■□□□ 1.05
SNRNP200-205ENST00000480835 FAM135AQ9P2D6 1515 aa21.59■■□□□ 1.05
SNRNP200-205ENST00000480835 TRHP20396 242 aaPredicted RBP21.57■■□□□ 1.04
SNRNP200-205ENST00000480835 RNF17Q9BXT8 1623 aaKnown RBP21.56■■□□□ 1.04
SNRNP200-205ENST00000480835 PRDM15P57071 1507 aaPredicted RBP21.55■■□□□ 1.04
SNRNP200-205ENST00000480835 REREQ9P2R6 1566 aa21.54■■□□□ 1.04
SNRNP200-205ENST00000480835 TIMELESSQ9UNS1 1208 aa21.54■■□□□ 1.04
SNRNP200-205ENST00000480835 COL17A1Q9UMD9 1497 aaPredicted RBP21.53■■□□□ 1.04
SNRNP200-205ENST00000480835 KANK1Q14678 1352 aa21.53■■□□□ 1.04
SNRNP200-205ENST00000480835 YEATS2Q9ULM3 1422 aa21.53■■□□□ 1.04
SNRNP200-205ENST00000480835 VWDEQ8N2E2 1590 aa21.53■■□□□ 1.04
SNRNP200-205ENST00000480835 ANKRD30BQ9BXX2 1392 aa21.52■■□□□ 1.04
SNRNP200-205ENST00000480835 KIF3BO15066 747 aa21.52■■□□□ 1.04
SNRNP200-205ENST00000480835 PKD2Q13563 968 aa21.52■■□□□ 1.04
SNRNP200-205ENST00000480835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.51■■□□□ 1.036e-6■□□□□ 8.3
SNRNP200-205ENST00000480835 ATP10AO60312 1499 aa21.51■■□□□ 1.03
SNRNP200-205ENST00000480835 MROH1Q8NDA8 1641 aa21.51■■□□□ 1.03
SNRNP200-205ENST00000480835 ARHGEF40Q8TER5 1519 aa21.5■■□□□ 1.03
SNRNP200-205ENST00000480835 SIN3AQ96ST3 1273 aa21.49■■□□□ 1.03
SNRNP200-205ENST00000480835 TET3O43151 1660 aa21.48■■□□□ 1.03
SNRNP200-205ENST00000480835 NEUROD1Q13562 356 aa21.46■■□□□ 1.03
SNRNP200-205ENST00000480835 AGLP35573 1532 aa21.45■■□□□ 1.02
SNRNP200-205ENST00000480835 LMTK2Q8IWU2 1503 aa21.45■■□□□ 1.02
SNRNP200-205ENST00000480835 FOXD1Q16676 465 aa21.45■■□□□ 1.02
SNRNP200-205ENST00000480835 RPRD2Q5VT52 1461 aaKnown RBP21.43■■□□□ 1.02
SNRNP200-205ENST00000480835 TONSLQ96HA7 1378 aa21.42■■□□□ 1.02
SNRNP200-205ENST00000480835 E9PCH4 1651 aa21.41■■□□□ 1.02
SNRNP200-205ENST00000480835 CEP152O94986 1710 aa21.41■■□□□ 1.02
SNRNP200-205ENST00000480835 ZC3H13Q5T200 1668 aaKnown RBP21.4■■□□□ 1.02
SNRNP200-205ENST00000480835 EFCAB6Q5THR3 1501 aa21.38■■□□□ 1.01
SNRNP200-205ENST00000480835 GGT6Q6P531 493 aa21.36■■□□□ 1.01
SNRNP200-205ENST00000480835 SPHKAPQ2M3C7 1700 aa21.35■■□□□ 1.01
SNRNP200-205ENST00000480835 ABCC3O15438 1527 aa21.35■■□□□ 1.01
SNRNP200-205ENST00000480835 PPP6R1Q9UPN7 881 aa21.35■■□□□ 1.01
SNRNP200-205ENST00000480835 CAMSAP1Q5T5Y3 1602 aa21.33■■□□□ 1
SNRNP200-205ENST00000480835 PLA2R1Q13018 1463 aa21.32■■□□□ 1
SNRNP200-205ENST00000480835 CCDC144AA2RUR9 1427 aa21.32■■□□□ 1
SNRNP200-205ENST00000480835 PTPRTO14522 1441 aa21.32■■□□□ 1
SNRNP200-205ENST00000480835 WASHC2CQ9Y4E1 1318 aa21.31■■□□□ 1
SNRNP200-205ENST00000480835 TRPM2O94759 1503 aa21.31■■□□□ 1
SNRNP200-205ENST00000480835 SIGLEC1Q9BZZ2 1709 aa21.31■■□□□ 1
SNRNP200-205ENST00000480835 PPP1R15AO75807 674 aaPredicted RBP21.3■■□□□ 1
SNRNP200-205ENST00000480835 ARHGAP31Q2M1Z3 1444 aa21.29■■□□□ 1
SNRNP200-205ENST00000480835 NPATQ14207 1427 aa21.25■□□□□ 0.99
SNRNP200-205ENST00000480835 L3MBTL2Q969R5 705 aa21.24■□□□□ 0.99
SNRNP200-205ENST00000480835 CNTLNQ9NXG0 1405 aa21.23■□□□□ 0.99
SNRNP200-205ENST00000480835 CLTCL1P53675 1640 aa21.22■□□□□ 0.99
SNRNP200-205ENST00000480835 NEURL4Q96JN8 1562 aa21.22■□□□□ 0.99
SNRNP200-205ENST00000480835 CFAP65Q6ZU64 1925 aaKnown RBP21.21■□□□□ 0.99
SNRNP200-205ENST00000480835 CLTCQ00610 1675 aaKnown RBP21.2■□□□□ 0.98
SNRNP200-205ENST00000480835 KIF1BO60333 1816 aa21.2■□□□□ 0.98
SNRNP200-205ENST00000480835 NOS1P29475 1434 aa21.19■□□□□ 0.98
SNRNP200-205ENST00000480835 ARID4BQ4LE39 1312 aaPredicted RBP21.17■□□□□ 0.98
SNRNP200-205ENST00000480835 PREX1Q8TCU6 1659 aa21.17■□□□□ 0.98
SNRNP200-205ENST00000480835 SPATA31E1Q6ZUB1 1445 aa21.15■□□□□ 0.98
SNRNP200-205ENST00000480835 MROH2AA6NES4 1674 aa21.15■□□□□ 0.98
SNRNP200-205ENST00000480835 MLECQ14165 292 aa21.14■□□□□ 0.97
SNRNP200-205ENST00000480835 ESF1Q9H501 851 aaKnown RBP21.14■□□□□ 0.97
SNRNP200-205ENST00000480835 UHRF1BP1Q6BDS2 1440 aa21.13■□□□□ 0.97
SNRNP200-205ENST00000480835 PIK3C2BO00750 1634 aa21.13■□□□□ 0.97
SNRNP200-205ENST00000480835 SYNMO15061 1565 aa21.13■□□□□ 0.97
SNRNP200-205ENST00000480835 STAC3Q96MF2 364 aa21.12■□□□□ 0.97
SNRNP200-205ENST00000480835 ERVK-7P63135 1459 aa21.1■□□□□ 0.97
SNRNP200-205ENST00000480835 ZNF316A6NFI3 1004 aaPredicted RBP21.1■□□□□ 0.97
SNRNP200-205ENST00000480835 UGGT1Q9NYU2 1555 aa21.1■□□□□ 0.97
SNRNP200-205ENST00000480835 SPATA31D1Q6ZQQ2 1576 aa21.08■□□□□ 0.97
SNRNP200-205ENST00000480835 SLC52A1Q9NWF4 448 aa21.08■□□□□ 0.97
SNRNP200-205ENST00000480835 ADGRB3O60242 1522 aa21.08■□□□□ 0.96
SNRNP200-205ENST00000480835 RGL3Q3MIN7 710 aa21.07■□□□□ 0.96
SNRNP200-205ENST00000480835 DCAF11Q8TEB1 546 aa21.07■□□□□ 0.96
SNRNP200-205ENST00000480835 FER1L4A9Z1Z3 1794 aa21.07■□□□□ 0.96
SNRNP200-205ENST00000480835 NBPF8Q3BBV2 869 aa21.06■□□□□ 0.96
SNRNP200-205ENST00000480835 ZMYM3Q14202 1370 aa21.06■□□□□ 0.96
SNRNP200-205ENST00000480835 IFT172Q9UG01 1749 aa21.04■□□□□ 0.96
SNRNP200-205ENST00000480835 RALGAPBQ86X10 1494 aa21.03■□□□□ 0.96
SNRNP200-205ENST00000480835 PRAG1Q86YV5 1406 aa21.03■□□□□ 0.96
SNRNP200-205ENST00000480835 KDM2AQ9Y2K7 1162 aa21.02■□□□□ 0.96
SNRNP200-205ENST00000480835 RPGRIP1LQ68CZ1 1315 aa21.01■□□□□ 0.95
SNRNP200-205ENST00000480835 MYOM2P54296 1465 aa21.01■□□□□ 0.95
SNRNP200-205ENST00000480835 FBXO31Q5XUX0 539 aaPredicted RBP21■□□□□ 0.95
SNRNP200-205ENST00000480835 TRPM1Q7Z4N2 1603 aa21■□□□□ 0.95
SNRNP200-205ENST00000480835 PPLO60437 1756 aa20.99■□□□□ 0.95
SNRNP200-205ENST00000480835 TMEM131LA2VDJ0 1609 aa20.98■□□□□ 0.95
SNRNP200-205ENST00000480835 MADDQ8WXG6 1647 aa20.98■□□□□ 0.95
SNRNP200-205ENST00000480835 IDI1Q13907 227 aa20.98■□□□□ 0.95
SNRNP200-205ENST00000480835 ZNF326Q5BKZ1 582 aaKnown RBP20.98■□□□□ 0.95
SNRNP200-205ENST00000480835 C3P01024 1663 aa20.98■□□□□ 0.95
SNRNP200-205ENST00000480835 CHGAP10645 457 aaKnown RBP20.97■□□□□ 0.95
SNRNP200-205ENST00000480835 MYO5BQ9ULV0 1848 aa20.96■□□□□ 0.95
SNRNP200-205ENST00000480835 ADAMTSL3P82987 1691 aa20.96■□□□□ 0.95
SNRNP200-205ENST00000480835 KIAA1210Q9ULL0 1709 aa20.95■□□□□ 0.94
SNRNP200-205ENST00000480835 LAMC1P11047 1609 aa20.95■□□□□ 0.94
SNRNP200-205ENST00000480835 TNRQ92752 1358 aa20.95■□□□□ 0.94
SNRNP200-205ENST00000480835 KDM5AP29375 1690 aaKnown RBP20.94■□□□□ 0.94
SNRNP200-205ENST00000480835 EIF4G2P78344 907 aaKnown RBP eCLIP20.93■□□□□ 0.94
SNRNP200-205ENST00000480835 NRXN1Q9ULB1 1477 aa20.92■□□□□ 0.94
SNRNP200-205ENST00000480835 GPRASP1Q5JY77 1395 aa20.91■□□□□ 0.94
SNRNP200-205ENST00000480835 NEXMIFQ5QGS0 1516 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms