RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 MAP3K9P80192 1104 aa7.31□□□□□ -1.24
R3HDM1-214ENST00000480793 PDE4AP27815 886 aa7.3□□□□□ -1.24
R3HDM1-214ENST00000480793 ZNF787Q6DD87 383 aa7.3□□□□□ -1.24
R3HDM1-214ENST00000480793 FBXW7Q969H0 707 aa7.3□□□□□ -1.24
R3HDM1-214ENST00000480793 RYDENQ9NUL5 291 aaKnown RBP7.3□□□□□ -1.24
R3HDM1-214ENST00000480793 KIAA1468Q9P260 1216 aa7.3□□□□□ -1.24
R3HDM1-214ENST00000480793 TSR3Q9UJK0 312 aaKnown RBP7.3□□□□□ -1.24
R3HDM1-214ENST00000480793 ONECUT3O60422 494 aaPredicted RBP7.29□□□□□ -1.24
R3HDM1-214ENST00000480793 LRCH3Q96II8 777 aa7.29□□□□□ -1.24
R3HDM1-214ENST00000480793 PRKD2Q9BZL6 878 aa7.29□□□□□ -1.24
R3HDM1-214ENST00000480793 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.29□□□□□ -1.24
R3HDM1-214ENST00000480793 HPS5Q9UPZ3 1129 aa7.29□□□□□ -1.24
R3HDM1-214ENST00000480793 PCDHGA10Q9Y5H3 936 aa7.29□□□□□ -1.24
R3HDM1-214ENST00000480793 TYW1BQ6NUM6 668 aa7.28□□□□□ -1.24
R3HDM1-214ENST00000480793 SEPT9Q9UHD8 586 aaPredicted RBP7.28□□□□□ -1.24
R3HDM1-214ENST00000480793 FAM98CQ17RN3 349 aaKnown RBP7.27□□□□□ -1.25
R3HDM1-214ENST00000480793 NCKAP5LQ9HCH0 1330 aa7.26□□□□□ -1.25
R3HDM1-214ENST00000480793 PHF14O94880 888 aa7.25□□□□□ -1.25
R3HDM1-214ENST00000480793 DDX27Q96GQ7 796 aaKnown RBP7.25□□□□□ -1.25
R3HDM1-214ENST00000480793 V9GY48 417 aaPredicted RBP7.24□□□□□ -1.25
R3HDM1-214ENST00000480793 TRIM6-TRIM34B2RNG4 842 aa7.23□□□□□ -1.25
R3HDM1-214ENST00000480793 CHGAP10645 457 aaKnown RBP7.22□□□□□ -1.25
R3HDM1-214ENST00000480793 PPP4CP60510 307 aa7.22□□□□□ -1.25
R3HDM1-214ENST00000480793 ZNF775Q96BV0 537 aaPredicted RBP7.22□□□□□ -1.25
R3HDM1-214ENST00000480793 LARP6Q9BRS8 491 aaKnown RBP7.22□□□□□ -1.25
R3HDM1-214ENST00000480793 C6orf132Q5T0Z8 1188 aa7.2□□□□□ -1.26
R3HDM1-214ENST00000480793 EPAS1Q99814 870 aa7.2□□□□□ -1.26
R3HDM1-214ENST00000480793 PDZRN3Q9UPQ7 1066 aa7.2□□□□□ -1.26
R3HDM1-214ENST00000480793 TJAP1Q5JTD0 557 aa7.19□□□□□ -1.26
R3HDM1-214ENST00000480793 PPP1R18Q6NYC8 613 aa7.19□□□□□ -1.26
R3HDM1-214ENST00000480793 IL21Q9HBE4 155 aa7.19□□□□□ -1.26
R3HDM1-214ENST00000480793 NKX1-1Q15270 411 aaPredicted RBP7.18□□□□□ -1.26
R3HDM1-214ENST00000480793 DNAJC5Q9H3Z4 198 aa7.18□□□□□ -1.26
R3HDM1-214ENST00000480793 EMILIN3Q9NT22 766 aa7.18□□□□□ -1.26
R3HDM1-214ENST00000480793 MFSD10Q14728 455 aa7.17□□□□□ -1.26
R3HDM1-214ENST00000480793 MTRQ99707 1265 aa7.17□□□□□ -1.26
R3HDM1-214ENST00000480793 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.17□□□□□ -1.26
R3HDM1-214ENST00000480793 PACS2Q86VP3 889 aa7.16□□□□□ -1.26
R3HDM1-214ENST00000480793 GGCXP38435 758 aa7.14□□□□□ -1.27
R3HDM1-214ENST00000480793 RBM33Q96EV2 1170 aaKnown RBP7.14□□□□□ -1.27
R3HDM1-214ENST00000480793 SAMD7Q7Z3H4 446 aa7.12□□□□□ -1.27
R3HDM1-214ENST00000480793 TSKSQ9UJT2 592 aa7.11□□□□□ -1.27
R3HDM1-214ENST00000480793 ZNF516Q92618 1163 aa7.1□□□□□ -1.27
R3HDM1-214ENST00000480793 PKDCCQ504Y2 493 aa7.09□□□□□ -1.27
R3HDM1-214ENST00000480793 RNF40O75150 1001 aa7.08□□□□□ -1.28
R3HDM1-214ENST00000480793 SMAPO00193 183 aa7.07□□□□□ -1.28
R3HDM1-214ENST00000480793 MAP3K7O43318 606 aa7.07□□□□□ -1.28
R3HDM1-214ENST00000480793 DDX12PQ92771 950 aa7.07□□□□□ -1.28
R3HDM1-214ENST00000480793 NBPF26B4DH59 902 aa7.06□□□□□ -1.28
R3HDM1-214ENST00000480793 DPYSL4O14531 572 aa7.06□□□□□ -1.28
R3HDM1-214ENST00000480793 HDGFP51858 240 aaKnown RBP7.06□□□□□ -1.28
R3HDM1-214ENST00000480793 EN1Q05925 392 aaPredicted RBP7.06□□□□□ -1.28
R3HDM1-214ENST00000480793 NKX2-3Q8TAU0 364 aa7.06□□□□□ -1.28
R3HDM1-214ENST00000480793 NECTIN2Q92692 538 aa7.06□□□□□ -1.28
R3HDM1-214ENST00000480793 TMUB1Q9BVT8 246 aa7.06□□□□□ -1.28
R3HDM1-214ENST00000480793 DGAT1O75907 488 aa7.05□□□□□ -1.28
R3HDM1-214ENST00000480793 MYT1Q01538 1121 aa7.05□□□□□ -1.28
R3HDM1-214ENST00000480793 NBR1Q14596 966 aa7.05□□□□□ -1.28
R3HDM1-214ENST00000480793 GTPBP6O43824 516 aaPredicted RBP7.04□□□□□ -1.28
R3HDM1-214ENST00000480793 APLP1P51693 650 aa7.04□□□□□ -1.28
R3HDM1-214ENST00000480793 TSR1Q2NL82 804 aaKnown RBP7.04□□□□□ -1.28
R3HDM1-214ENST00000480793 CDCA7LQ96GN5 454 aa7.04□□□□□ -1.28
R3HDM1-214ENST00000480793 PNMA3Q9UL41 463 aa7.04□□□□□ -1.28
R3HDM1-214ENST00000480793 PRSS12P56730 875 aa7.02□□□□□ -1.29
R3HDM1-214ENST00000480793 COPS2P61201 443 aa7.02□□□□□ -1.29
R3HDM1-214ENST00000480793 CAMK2BQ13554 666 aa7.02□□□□□ -1.29
R3HDM1-214ENST00000480793 TREML4Q6UXN2 200 aa7.02□□□□□ -1.29
R3HDM1-214ENST00000480793 TRIM67Q6ZTA4 783 aa7.02□□□□□ -1.29
R3HDM1-214ENST00000480793 CERKQ8TCT0 537 aa7.02□□□□□ -1.29
R3HDM1-214ENST00000480793 TATDN2Q93075 761 aa7.02□□□□□ -1.29
R3HDM1-214ENST00000480793 POTECB2RU33 542 aa7.01□□□□□ -1.29
R3HDM1-214ENST00000480793 SLC19A1P41440 591 aa7.01□□□□□ -1.29
R3HDM1-214ENST00000480793 FAM187AA6NFU0 413 aa6.99□□□□□ -1.29
R3HDM1-214ENST00000480793 PRR20EP86478 221 aa6.99□□□□□ -1.29
R3HDM1-214ENST00000480793 PRR20CP86479 221 aa6.99□□□□□ -1.29
R3HDM1-214ENST00000480793 PRR20DP86480 221 aa6.99□□□□□ -1.29
R3HDM1-214ENST00000480793 PRR20BP86481 221 aa6.99□□□□□ -1.29
R3HDM1-214ENST00000480793 PRR20AP86496 221 aa6.99□□□□□ -1.29
R3HDM1-214ENST00000480793 FAM198AQ9UFP1 575 aa6.99□□□□□ -1.29
R3HDM1-214ENST00000480793 ZPR1O75312 459 aa6.98□□□□□ -1.29
R3HDM1-214ENST00000480793 ZNF598Q86UK7 904 aaKnown RBP6.98□□□□□ -1.29
R3HDM1-214ENST00000480793 SLF2Q8IX21 1173 aa6.98□□□□□ -1.29
R3HDM1-214ENST00000480793 SLC4A3P48751 1232 aa6.97□□□□□ -1.29
R3HDM1-214ENST00000480793 SPRYD7Q5W111 196 aa6.97□□□□□ -1.29
R3HDM1-214ENST00000480793 RNF223E7ERA6 249 aa6.96□□□□□ -1.3
R3HDM1-214ENST00000480793 C3orf80F5H4A9 247 aa6.96□□□□□ -1.3
R3HDM1-214ENST00000480793 NUDT18Q6ZVK8 323 aa6.96□□□□□ -1.3
R3HDM1-214ENST00000480793 CADPS2Q86UW7 1296 aa6.96□□□□□ -1.3
R3HDM1-214ENST00000480793 LCE2AQ5TA79 106 aaPredicted RBP6.95□□□□□ -1.3
R3HDM1-214ENST00000480793 ZNF697Q5TEC3 545 aa6.95□□□□□ -1.3
R3HDM1-214ENST00000480793 PRR14Q9BWN1 585 aa6.95□□□□□ -1.3
R3HDM1-214ENST00000480793 STK17AQ9UEE5 414 aa6.95□□□□□ -1.3
R3HDM1-214ENST00000480793 PDIA6Q15084 440 aa6.94□□□□□ -1.3
R3HDM1-214ENST00000480793 PCDHB3Q9Y5E6 796 aa6.94□□□□□ -1.3
R3HDM1-214ENST00000480793 TNFRSF10AO00220 468 aa6.93□□□□□ -1.3
R3HDM1-214ENST00000480793 SWT1Q5T5J6 900 aaKnown RBP6.93□□□□□ -1.3
R3HDM1-214ENST00000480793 ANKLE1Q8NAG6 615 aa6.93□□□□□ -1.3
R3HDM1-214ENST00000480793 EMID1Q96A84 441 aaPredicted RBP6.93□□□□□ -1.3
R3HDM1-214ENST00000480793 RBM27Q9P2N5 1060 aaKnown RBP6.93□□□□□ -1.3
R3HDM1-214ENST00000480793 SPDYE16A6NNV3 312 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms