RNA–Protein interactions for RNA: ENST00000480548.5

SGIP1-209, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 5

Gene SGIP1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-209ENST00000480548 PTGDRQ13258 359 aa9.41□□□□□ -0.9
SGIP1-209ENST00000480548 ACIN1Q9UKV3 1341 aaKnown RBP9.4□□□□□ -0.9
SGIP1-209ENST00000480548 TMUB1Q9BVT8 246 aa9.4□□□□□ -0.9
SGIP1-209ENST00000480548 GPCPD1Q9NPB8 672 aa9.4□□□□□ -0.9
SGIP1-209ENST00000480548 E9PSI1 815 aa9.39□□□□□ -0.91
SGIP1-209ENST00000480548 PLPP6Q8IY26 295 aa9.39□□□□□ -0.91
SGIP1-209ENST00000480548 DDX12PQ92771 950 aa9.39□□□□□ -0.91
SGIP1-209ENST00000480548 POLR3EQ9NVU0 708 aa9.39□□□□□ -0.91
SGIP1-209ENST00000480548 MDM2Q00987 491 aaPredicted RBP9.38□□□□□ -0.91
SGIP1-209ENST00000480548 PRKAR2AP13861 404 aaKnown RBP9.37□□□□□ -0.91
SGIP1-209ENST00000480548 SSTR3P32745 418 aaPredicted RBP9.37□□□□□ -0.91
SGIP1-209ENST00000480548 BEGAINQ9BUH8 593 aa9.37□□□□□ -0.91
SGIP1-209ENST00000480548 PTGER2P43116 358 aa9.36□□□□□ -0.91
SGIP1-209ENST00000480548 FXR2P51116 673 aaKnown RBP eCLIP9.36□□□□□ -0.91
SGIP1-209ENST00000480548 BANK1Q8NDB2 785 aa9.36□□□□□ -0.91
SGIP1-209ENST00000480548 SNRKQ9NRH2 765 aa9.36□□□□□ -0.91
SGIP1-209ENST00000480548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.36□□□□□ -0.91
SGIP1-209ENST00000480548 ILDR1Q86SU0 546 aaPredicted RBP9.35□□□□□ -0.91
SGIP1-209ENST00000480548 CALR3Q96L12 384 aaKnown RBP9.35□□□□□ -0.91
SGIP1-209ENST00000480548 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.35□□□□□ -0.91
SGIP1-209ENST00000480548 WWC1Q8IX03 1113 aa9.34□□□□□ -0.91
SGIP1-209ENST00000480548 PRIM1P49642 420 aaKnown RBP9.33□□□□□ -0.92
SGIP1-209ENST00000480548 KCNA1Q09470 495 aa9.33□□□□□ -0.92
SGIP1-209ENST00000480548 UPF1Q92900 1129 aaKnown RBP eCLIP9.33□□□□□ -0.92
SGIP1-209ENST00000480548 TBC1D12O60347 775 aa9.32□□□□□ -0.92
SGIP1-209ENST00000480548 RFC5P40937 340 aa9.32□□□□□ -0.92
SGIP1-209ENST00000480548 MICALL2Q8IY33 904 aa9.32□□□□□ -0.92
SGIP1-209ENST00000480548 CLK2P49760 499 aaKnown RBP9.31□□□□□ -0.92
SGIP1-209ENST00000480548 MYSM1Q5VVJ2 828 aa9.31□□□□□ -0.92
SGIP1-209ENST00000480548 GDPD2Q9HCC8 539 aa9.31□□□□□ -0.92
SGIP1-209ENST00000480548 BRD1O95696 1058 aa9.3□□□□□ -0.92
SGIP1-209ENST00000480548 GLMNQ92990 594 aa9.3□□□□□ -0.92
SGIP1-209ENST00000480548 PHOX2BQ99453 314 aa9.3□□□□□ -0.92
SGIP1-209ENST00000480548 C2orf72A6NCS6 295 aa9.29□□□□□ -0.92
SGIP1-209ENST00000480548 TMEM259Q4ZIN3 620 aa9.29□□□□□ -0.92
SGIP1-209ENST00000480548 PHF12Q96QT6 1004 aa9.29□□□□□ -0.92
SGIP1-209ENST00000480548 FAM217BQ9NTX9 383 aaPredicted RBP9.29□□□□□ -0.92
SGIP1-209ENST00000480548 ZRANB1Q9UGI0 708 aa9.29□□□□□ -0.92
SGIP1-209ENST00000480548 ABL2P42684 1182 aa9.27□□□□□ -0.93
SGIP1-209ENST00000480548 DPY19L2Q6NUT2 758 aa9.27□□□□□ -0.93
SGIP1-209ENST00000480548 PBXIP1Q96AQ6 731 aa9.27□□□□□ -0.93
SGIP1-209ENST00000480548 USTQ9Y2C2 406 aa9.27□□□□□ -0.93
SGIP1-209ENST00000480548 MTMR14Q8NCE2 650 aa9.26□□□□□ -0.93
SGIP1-209ENST00000480548 TRPC6Q9Y210 931 aa9.26□□□□□ -0.93
SGIP1-209ENST00000480548 AMOTL2Q9Y2J4 779 aa9.26□□□□□ -0.93
SGIP1-209ENST00000480548 POM121CA8CG34 1229 aa9.25□□□□□ -0.93
SGIP1-209ENST00000480548 CSB-PGBD3P0DP91 1061 aa9.25□□□□□ -0.93
SGIP1-209ENST00000480548 PRM3Q9NNZ6 103 aa9.25□□□□□ -0.93
SGIP1-209ENST00000480548 KIF3CO14782 793 aa9.24□□□□□ -0.93
SGIP1-209ENST00000480548 CCDC27Q2M243 656 aa9.24□□□□□ -0.93
SGIP1-209ENST00000480548 CDHR5Q9HBB8 845 aa9.24□□□□□ -0.93
SGIP1-209ENST00000480548 EVI5O60447 810 aa9.23□□□□□ -0.93
SGIP1-209ENST00000480548 TBC1D2Q9BYX2 928 aa9.23□□□□□ -0.93
SGIP1-209ENST00000480548 NPDC1Q9NQX5 325 aaPredicted RBP9.23□□□□□ -0.93
SGIP1-209ENST00000480548 HMGB1P09429 215 aaKnown RBP9.22□□□□□ -0.93
SGIP1-209ENST00000480548 MYT1LQ9UL68 1186 aa9.22□□□□□ -0.93
SGIP1-209ENST00000480548 DIXDC1Q155Q3 683 aa9.21□□□□□ -0.94
SGIP1-209ENST00000480548 FBXO31Q5XUX0 539 aaPredicted RBP9.21□□□□□ -0.94
SGIP1-209ENST00000480548 PPP2R2DQ66LE6 453 aa9.21□□□□□ -0.94
SGIP1-209ENST00000480548 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.2□□□□□ -0.94
SGIP1-209ENST00000480548 GABBR2O75899 941 aa9.2□□□□□ -0.94
SGIP1-209ENST00000480548 NLRP7Q8WX94 980 aa9.2□□□□□ -0.94
SGIP1-209ENST00000480548 MS4A3Q96HJ5 214 aa9.2□□□□□ -0.94
SGIP1-209ENST00000480548 IVNS1ABPQ9Y6Y0 642 aa9.2□□□□□ -0.94
SGIP1-209ENST00000480548 TTLL13PA6NNM8 815 aa9.19□□□□□ -0.94
SGIP1-209ENST00000480548 RFX1P22670 979 aa9.19□□□□□ -0.94
SGIP1-209ENST00000480548 EN1Q05925 392 aaPredicted RBP9.19□□□□□ -0.94
SGIP1-209ENST00000480548 SND1Q7KZF4 910 aaKnown RBP eCLIP9.19□□□□□ -0.94
SGIP1-209ENST00000480548 METTL3Q86U44 580 aaKnown RBP9.19□□□□□ -0.94
SGIP1-209ENST00000480548 USP35Q9P2H5 1018 aa9.19□□□□□ -0.94
SGIP1-209ENST00000480548 LIMD1Q9UGP4 676 aa9.19□□□□□ -0.94
SGIP1-209ENST00000480548 TBC1D2BQ9UPU7 963 aa9.19□□□□□ -0.94
SGIP1-209ENST00000480548 SOCS7O14512 581 aa9.18□□□□□ -0.94
SGIP1-209ENST00000480548 MAP3K7O43318 606 aa9.18□□□□□ -0.94
SGIP1-209ENST00000480548 TIE1P35590 1138 aa9.18□□□□□ -0.94
SGIP1-209ENST00000480548 OATP04181 439 aa9.17□□□□□ -0.94
SGIP1-209ENST00000480548 CD44P16070 742 aaKnown RBP9.17□□□□□ -0.94
SGIP1-209ENST00000480548 FAM161AQ3B820 660 aa9.17□□□□□ -0.94
SGIP1-209ENST00000480548 TMEM121BQ9BXQ6 578 aaPredicted RBP9.17□□□□□ -0.94
SGIP1-209ENST00000480548 HSP90B1P14625 803 aaKnown RBP9.16□□□□□ -0.94
SGIP1-209ENST00000480548 HDGFL1Q5TGJ6 251 aa9.16□□□□□ -0.94
SGIP1-209ENST00000480548 RIC3Q7Z5B4 369 aa9.16□□□□□ -0.94
SGIP1-209ENST00000480548 BOLA1Q9Y3E2 137 aa9.16□□□□□ -0.94
SGIP1-209ENST00000480548 G3V3G9 751 aa9.15□□□□□ -0.94
SGIP1-209ENST00000480548 CFAP70Q5T0N1 1121 aa9.15□□□□□ -0.94
SGIP1-209ENST00000480548 CARNS1A5YM72 827 aa9.14□□□□□ -0.95
SGIP1-209ENST00000480548 PDCD7Q8N8D1 485 aaKnown RBP9.14□□□□□ -0.95
SGIP1-209ENST00000480548 CDK11BP21127 795 aaKnown RBP9.13□□□□□ -0.95
SGIP1-209ENST00000480548 RBM33Q96EV2 1170 aaKnown RBP9.13□□□□□ -0.95
SGIP1-209ENST00000480548 EPAS1Q99814 870 aa9.13□□□□□ -0.95
SGIP1-209ENST00000480548 TRIM35Q9UPQ4 493 aa9.13□□□□□ -0.95
SGIP1-209ENST00000480548 CDK11AQ9UQ88 783 aaPredicted RBP9.13□□□□□ -0.95
SGIP1-209ENST00000480548 PHF14O94880 888 aa9.12□□□□□ -0.95
SGIP1-209ENST00000480548 SRPK2P78362 688 aaKnown RBP9.12□□□□□ -0.95
SGIP1-209ENST00000480548 ADAMTS19Q8TE59 1207 aa9.12□□□□□ -0.95
SGIP1-209ENST00000480548 PXYLP1Q8TE99 480 aa9.12□□□□□ -0.95
SGIP1-209ENST00000480548 AP1G2O75843 785 aa9.11□□□□□ -0.95
SGIP1-209ENST00000480548 TSR1Q2NL82 804 aaKnown RBP9.11□□□□□ -0.95
SGIP1-209ENST00000480548 TUSC1Q2TAM9 212 aa9.11□□□□□ -0.95
SGIP1-209ENST00000480548 PUS7Q96PZ0 661 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms