RNA–Protein interactions for RNA: ENST00000480420.5

CTPS1-209, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 750 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-209ENST00000480420 CAMSAP1Q5T5Y3 1602 aa12.59□□□□□ -0.39
CTPS1-209ENST00000480420 ARHGEF5Q12774 1597 aa12.58□□□□□ -0.4
CTPS1-209ENST00000480420 MYOM3Q5VTT5 1437 aa12.58□□□□□ -0.4
CTPS1-209ENST00000480420 NCKAP5LQ9HCH0 1330 aa12.58□□□□□ -0.4
CTPS1-209ENST00000480420 FBXO31Q5XUX0 539 aaPredicted RBP12.57□□□□□ -0.4
CTPS1-209ENST00000480420 MYO3AQ8NEV4 1616 aa12.57□□□□□ -0.4
CTPS1-209ENST00000480420 NPATQ14207 1427 aa12.56□□□□□ -0.4
CTPS1-209ENST00000480420 NCOA1Q15788 1441 aa12.56□□□□□ -0.4
CTPS1-209ENST00000480420 MAP3K1Q13233 1512 aa12.56□□□□□ -0.4
CTPS1-209ENST00000480420 PTPRKQ15262 1439 aa12.55□□□□□ -0.4
CTPS1-209ENST00000480420 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.55□□□□□ -0.46e-6■■■□□ 15.1
CTPS1-209ENST00000480420 RRP7BPQ9NSQ0 103 aa12.55□□□□□ -0.4
CTPS1-209ENST00000480420 CHIC2Q9UKJ5 165 aa12.55□□□□□ -0.4
CTPS1-209ENST00000480420 PPP6R1Q9UPN7 881 aa12.55□□□□□ -0.4
CTPS1-209ENST00000480420 PTPN23Q9H3S7 1636 aa12.55□□□□□ -0.4
CTPS1-209ENST00000480420 FAM50AQ14320 339 aaKnown RBP12.54□□□□□ -0.4
CTPS1-209ENST00000480420 KDM5DQ9BY66 1539 aa12.53□□□□□ -0.4
CTPS1-209ENST00000480420 CEP170BQ9Y4F5 1589 aaPredicted RBP12.53□□□□□ -0.4
CTPS1-209ENST00000480420 MIA2Q96PC5 1412 aa12.53□□□□□ -0.4
CTPS1-209ENST00000480420 PPARGC1BQ86YN6 1023 aaKnown RBP12.52□□□□□ -0.41
CTPS1-209ENST00000480420 TNRQ92752 1358 aa12.52□□□□□ -0.41
CTPS1-209ENST00000480420 CEP152O94986 1710 aa12.51□□□□□ -0.41
CTPS1-209ENST00000480420 ZNF142P52746 1687 aaPredicted RBP12.51□□□□□ -0.41
CTPS1-209ENST00000480420 MAST1Q9Y2H9 1570 aa12.5□□□□□ -0.41
CTPS1-209ENST00000480420 CROCC2H7BZ55 1655 aa12.5□□□□□ -0.41
CTPS1-209ENST00000480420 A2ML1A8K2U0 1454 aa12.48□□□□□ -0.41
CTPS1-209ENST00000480420 PZPP20742 1482 aa12.48□□□□□ -0.41
CTPS1-209ENST00000480420 FGD6Q6ZV73 1430 aa12.48□□□□□ -0.41
CTPS1-209ENST00000480420 KIF15Q9NS87 1388 aa12.48□□□□□ -0.41
CTPS1-209ENST00000480420 ZNF335Q9H4Z2 1342 aaPredicted RBP12.48□□□□□ -0.41
CTPS1-209ENST00000480420 PKD2Q13563 968 aa12.48□□□□□ -0.41
CTPS1-209ENST00000480420 DNMT1P26358 1616 aaKnown RBP12.48□□□□□ -0.41
CTPS1-209ENST00000480420 DUOX2Q9NRD8 1548 aa12.47□□□□□ -0.41
CTPS1-209ENST00000480420 ABCC5O15440 1437 aa12.47□□□□□ -0.41
CTPS1-209ENST00000480420 RNF17Q9BXT8 1623 aaKnown RBP12.47□□□□□ -0.41
CTPS1-209ENST00000480420 EIF2AK4Q9P2K8 1649 aaKnown RBP12.47□□□□□ -0.41
CTPS1-209ENST00000480420 DAPK1P53355 1430 aa12.46□□□□□ -0.41
CTPS1-209ENST00000480420 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.46□□□□□ -0.41
CTPS1-209ENST00000480420 UBAP1LF5GYI3 381 aa12.46□□□□□ -0.41
CTPS1-209ENST00000480420 ITGAEP38570 1179 aa12.46□□□□□ -0.41
CTPS1-209ENST00000480420 MED1Q15648 1581 aaPredicted RBP12.46□□□□□ -0.42
CTPS1-209ENST00000480420 POLR1AO95602 1720 aaPredicted RBP12.45□□□□□ -0.42
CTPS1-209ENST00000480420 ZC3H13Q5T200 1668 aaKnown RBP12.45□□□□□ -0.42
CTPS1-209ENST00000480420 ANKLE2Q86XL3 938 aa12.45□□□□□ -0.42
CTPS1-209ENST00000480420 THEMISQ8N1K5 641 aaPredicted RBP12.45□□□□□ -0.42
CTPS1-209ENST00000480420 ABCC3O15438 1527 aa12.45□□□□□ -0.42
CTPS1-209ENST00000480420 ANKRD30AQ9BXX3 1397 aa12.44□□□□□ -0.42
CTPS1-209ENST00000480420 SCAF1Q9H7N4 1312 aaKnown RBP12.44□□□□□ -0.42
CTPS1-209ENST00000480420 KANK1Q14678 1352 aa12.43□□□□□ -0.42
CTPS1-209ENST00000480420 UGGT1Q9NYU2 1555 aa12.43□□□□□ -0.42
CTPS1-209ENST00000480420 FAM135AQ9P2D6 1515 aa12.43□□□□□ -0.42
CTPS1-209ENST00000480420 PLA2R1Q13018 1463 aa12.43□□□□□ -0.42
CTPS1-209ENST00000480420 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
CTPS1-209ENST00000480420 TCOF1Q13428 1488 aaKnown RBP12.42□□□□□ -0.42
CTPS1-209ENST00000480420 SHANK2Q9UPX8 1470 aa12.42□□□□□ -0.42
CTPS1-209ENST00000480420 MROH1Q8NDA8 1641 aa12.41□□□□□ -0.42
CTPS1-209ENST00000480420 NLRP1Q9C000 1473 aa12.4□□□□□ -0.42
CTPS1-209ENST00000480420 ERBINQ96RT1 1412 aa12.4□□□□□ -0.42
CTPS1-209ENST00000480420 ERVK-7P63135 1459 aa12.4□□□□□ -0.43
CTPS1-209ENST00000480420 PIP4K2BP78356 416 aa12.38□□□□□ -0.43
CTPS1-209ENST00000480420 HSPA1LP34931 641 aa12.37□□□□□ -0.43
CTPS1-209ENST00000480420 BCANQ96GW7 911 aa12.37□□□□□ -0.43
CTPS1-209ENST00000480420 PRDM15P57071 1507 aaPredicted RBP12.37□□□□□ -0.43
CTPS1-209ENST00000480420 NPHP4O75161 1426 aaPredicted RBP12.37□□□□□ -0.43
CTPS1-209ENST00000480420 IQGAP1P46940 1657 aa12.36□□□□□ -0.43
CTPS1-209ENST00000480420 NEURL4Q96JN8 1562 aa12.36□□□□□ -0.43
CTPS1-209ENST00000480420 TXNDC2Q86VQ3 553 aa12.36□□□□□ -0.43
CTPS1-209ENST00000480420 UBR1Q8IWV7 1749 aa12.36□□□□□ -0.43
CTPS1-209ENST00000480420 EID1Q9Y6B2 187 aa12.35□□□□□ -0.43
CTPS1-209ENST00000480420 DEPDC5O75140 1603 aa12.35□□□□□ -0.43
CTPS1-209ENST00000480420 PIK3C2BO00750 1634 aa12.34□□□□□ -0.43
CTPS1-209ENST00000480420 CHGAP10645 457 aaKnown RBP12.34□□□□□ -0.43
CTPS1-209ENST00000480420 ALKQ9UM73 1620 aa12.33□□□□□ -0.43
CTPS1-209ENST00000480420 CPS1P31327 1500 aa12.33□□□□□ -0.44
CTPS1-209ENST00000480420 ANKRD50Q9ULJ7 1429 aa12.33□□□□□ -0.44
CTPS1-209ENST00000480420 ADGRL2O95490 1459 aa12.3□□□□□ -0.44
CTPS1-209ENST00000480420 SCAF11Q99590 1463 aaKnown RBP12.3□□□□□ -0.44
CTPS1-209ENST00000480420 TOM1O60784 492 aa12.3□□□□□ -0.44
CTPS1-209ENST00000480420 LTKP29376 864 aa12.3□□□□□ -0.44
CTPS1-209ENST00000480420 IDI1Q13907 227 aa12.3□□□□□ -0.44
CTPS1-209ENST00000480420 VWDEQ8N2E2 1590 aa12.3□□□□□ -0.44
CTPS1-209ENST00000480420 ARHGAP31Q2M1Z3 1444 aa12.29□□□□□ -0.44
CTPS1-209ENST00000480420 STRCP1A6NGW2 1772 aa12.28□□□□□ -0.44
CTPS1-209ENST00000480420 MYO5BQ9ULV0 1848 aa12.28□□□□□ -0.44
CTPS1-209ENST00000480420 EFCAB6Q5THR3 1501 aa12.28□□□□□ -0.44
CTPS1-209ENST00000480420 PPP1R15AO75807 674 aaPredicted RBP12.28□□□□□ -0.44
CTPS1-209ENST00000480420 MED14O60244 1454 aa12.27□□□□□ -0.44
CTPS1-209ENST00000480420 SYNMO15061 1565 aa12.27□□□□□ -0.44
CTPS1-209ENST00000480420 SLC26A8Q96RN1 970 aa12.27□□□□□ -0.45
CTPS1-209ENST00000480420 NUTM2DQ5VT03 806 aaPredicted RBP12.26□□□□□ -0.45
CTPS1-209ENST00000480420 TMEM2Q9UHN6 1383 aa12.26□□□□□ -0.45
CTPS1-209ENST00000480420 LMTK2Q8IWU2 1503 aa12.26□□□□□ -0.45
CTPS1-209ENST00000480420 TET3O43151 1660 aa12.26□□□□□ -0.45
CTPS1-209ENST00000480420 GCC2Q8IWJ2 1684 aa12.26□□□□□ -0.45
CTPS1-209ENST00000480420 NUP155O75694 1391 aa12.25□□□□□ -0.45
CTPS1-209ENST00000480420 SLIT1O75093 1534 aa12.24□□□□□ -0.45
CTPS1-209ENST00000480420 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
CTPS1-209ENST00000480420 SLC52A1Q9NWF4 448 aa12.24□□□□□ -0.45
CTPS1-209ENST00000480420 E9PCH4 1651 aa12.23□□□□□ -0.45
CTPS1-209ENST00000480420 UNC13BO14795 1591 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms