RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 E9PCH4 1651 aa12.12□□□□□ -0.47
SNRNP200-203ENST00000480242 POGZQ7Z3K3 1410 aa12.11□□□□□ -0.47
SNRNP200-203ENST00000480242 CAMSAP1Q5T5Y3 1602 aa12.08□□□□□ -0.48
SNRNP200-203ENST00000480242 PZPP20742 1482 aa12.08□□□□□ -0.48
SNRNP200-203ENST00000480242 NCOA1Q15788 1441 aa12.07□□□□□ -0.48
SNRNP200-203ENST00000480242 SETD1AO15047 1707 aaKnown RBP12.07□□□□□ -0.48
SNRNP200-203ENST00000480242 KCNH8Q96L42 1107 aa12.07□□□□□ -0.48
SNRNP200-203ENST00000480242 MADDQ8WXG6 1647 aa12.06□□□□□ -0.48
SNRNP200-203ENST00000480242 ZNF142P52746 1687 aaPredicted RBP12.06□□□□□ -0.48
SNRNP200-203ENST00000480242 MSH5O43196 834 aa12.06□□□□□ -0.48
SNRNP200-203ENST00000480242 EFCAB6Q5THR3 1501 aa12.05□□□□□ -0.48
SNRNP200-203ENST00000480242 TRPM2O94759 1503 aa12.04□□□□□ -0.48
SNRNP200-203ENST00000480242 MYO3AQ8NEV4 1616 aa12.04□□□□□ -0.48
SNRNP200-203ENST00000480242 NEFLP07196 543 aa12.03□□□□□ -0.48
SNRNP200-203ENST00000480242 RPRD2Q5VT52 1461 aaKnown RBP12.02□□□□□ -0.49
SNRNP200-203ENST00000480242 ARHGAP5Q13017 1502 aa12□□□□□ -0.49
SNRNP200-203ENST00000480242 FANCAO15360 1455 aa12□□□□□ -0.49
SNRNP200-203ENST00000480242 PPLO60437 1756 aa12□□□□□ -0.49
SNRNP200-203ENST00000480242 PTPRTO14522 1441 aa12□□□□□ -0.49
SNRNP200-203ENST00000480242 ANO8Q9HCE9 1232 aaPredicted RBP11.99□□□□□ -0.49
SNRNP200-203ENST00000480242 NRXN1Q9ULB1 1477 aa11.99□□□□□ -0.49
SNRNP200-203ENST00000480242 FAM50AQ14320 339 aaKnown RBP11.99□□□□□ -0.49
SNRNP200-203ENST00000480242 PREX1Q8TCU6 1659 aa11.99□□□□□ -0.49
SNRNP200-203ENST00000480242 ARHGAP31Q2M1Z3 1444 aa11.99□□□□□ -0.49
SNRNP200-203ENST00000480242 SLC24A1O60721 1099 aa11.99□□□□□ -0.49
SNRNP200-203ENST00000480242 ADAMTSL3P82987 1691 aa11.99□□□□□ -0.49
SNRNP200-203ENST00000480242 C9orf84Q5VXU9 1444 aa11.98□□□□□ -0.49
SNRNP200-203ENST00000480242 MTUS2Q5JR59 1369 aa11.97□□□□□ -0.49
SNRNP200-203ENST00000480242 SPATA31D1Q6ZQQ2 1576 aa11.97□□□□□ -0.49
SNRNP200-203ENST00000480242 UGGT1Q9NYU2 1555 aa11.97□□□□□ -0.49
SNRNP200-203ENST00000480242 SETD5Q9C0A6 1442 aa11.97□□□□□ -0.49
SNRNP200-203ENST00000480242 IQGAP1P46940 1657 aa11.96□□□□□ -0.5
SNRNP200-203ENST00000480242 TRPM1Q7Z4N2 1603 aa11.96□□□□□ -0.5
SNRNP200-203ENST00000480242 PRAG1Q86YV5 1406 aa11.95□□□□□ -0.5
SNRNP200-203ENST00000480242 DHX57Q6P158 1386 aaKnown RBP11.95□□□□□ -0.5
SNRNP200-203ENST00000480242 RSPH4AQ5TD94 716 aa11.95□□□□□ -0.5
SNRNP200-203ENST00000480242 KNDC1Q76NI1 1749 aa11.95□□□□□ -0.5
SNRNP200-203ENST00000480242 DEKP35659 375 aaKnown RBP11.95□□□□□ -0.5
SNRNP200-203ENST00000480242 ADGRB3O60242 1522 aa11.95□□□□□ -0.5
SNRNP200-203ENST00000480242 RIMS1Q86UR5 1692 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-203ENST00000480242 SYNMO15061 1565 aa11.93□□□□□ -0.5
SNRNP200-203ENST00000480242 ABCC3O15438 1527 aa11.93□□□□□ -0.5
SNRNP200-203ENST00000480242 UHRF1BP1Q6BDS2 1440 aa11.91□□□□□ -0.5
SNRNP200-203ENST00000480242 CLTCL1P53675 1640 aa11.91□□□□□ -0.5
SNRNP200-203ENST00000480242 TRAPPC8Q9Y2L5 1435 aa11.91□□□□□ -0.5
SNRNP200-203ENST00000480242 ADGRL1O94910 1474 aa11.91□□□□□ -0.5
SNRNP200-203ENST00000480242 FER1L4A9Z1Z3 1794 aa11.9□□□□□ -0.5
SNRNP200-203ENST00000480242 TRIM52Q96A61 297 aa11.9□□□□□ -0.5
SNRNP200-203ENST00000480242 SETBP1Q9Y6X0 1596 aa11.89□□□□□ -0.51
SNRNP200-203ENST00000480242 KIF1BO60333 1816 aa11.88□□□□□ -0.51
SNRNP200-203ENST00000480242 TMEM131LA2VDJ0 1609 aa11.88□□□□□ -0.51
SNRNP200-203ENST00000480242 PLA2R1Q13018 1463 aa11.87□□□□□ -0.51
SNRNP200-203ENST00000480242 MYOM2P54296 1465 aa11.86□□□□□ -0.51
SNRNP200-203ENST00000480242 CDK11AQ9UQ88 783 aaPredicted RBP11.86□□□□□ -0.51
SNRNP200-203ENST00000480242 CLTCQ00610 1675 aaKnown RBP11.86□□□□□ -0.51
SNRNP200-203ENST00000480242 FANCIQ9NVI1 1328 aa11.85□□□□□ -0.51
SNRNP200-203ENST00000480242 CD109Q6YHK3 1445 aa11.85□□□□□ -0.51
SNRNP200-203ENST00000480242 RAB3GAP2Q9H2M9 1393 aa11.85□□□□□ -0.51
SNRNP200-203ENST00000480242 CCDC136Q96JN2 1154 aa11.85□□□□□ -0.51
SNRNP200-203ENST00000480242 SALL2Q9Y467 1007 aaPredicted RBP11.85□□□□□ -0.51
SNRNP200-203ENST00000480242 NBR1Q14596 966 aa11.85□□□□□ -0.51
SNRNP200-203ENST00000480242 C3P01024 1663 aa11.84□□□□□ -0.51
SNRNP200-203ENST00000480242 IRX6P78412 446 aaPredicted RBP11.84□□□□□ -0.51
SNRNP200-203ENST00000480242 DDX10Q13206 875 aaKnown RBP11.84□□□□□ -0.51
SNRNP200-203ENST00000480242 NOS1P29475 1434 aa11.84□□□□□ -0.51
SNRNP200-203ENST00000480242 NRXN3Q9Y4C0 1643 aa11.84□□□□□ -0.51
SNRNP200-203ENST00000480242 UBR1Q8IWV7 1749 aa11.84□□□□□ -0.51
SNRNP200-203ENST00000480242 USP54Q70EL1 1684 aa11.83□□□□□ -0.52
SNRNP200-203ENST00000480242 MYT1LQ9UL68 1186 aa11.83□□□□□ -0.52
SNRNP200-203ENST00000480242 COL17A1Q9UMD9 1497 aaPredicted RBP11.82□□□□□ -0.52
SNRNP200-203ENST00000480242 A2MP01023 1474 aa11.81□□□□□ -0.52
SNRNP200-203ENST00000480242 DHX29Q7Z478 1369 aaKnown RBP11.8□□□□□ -0.52
SNRNP200-203ENST00000480242 ANKRD30BQ9BXX2 1392 aa11.8□□□□□ -0.52
SNRNP200-203ENST00000480242 SPATA31E1Q6ZUB1 1445 aa11.8□□□□□ -0.52
SNRNP200-203ENST00000480242 MYO5BQ9ULV0 1848 aa11.79□□□□□ -0.52
SNRNP200-203ENST00000480242 ANKRD30AQ9BXX3 1397 aa11.79□□□□□ -0.52
SNRNP200-203ENST00000480242 ANKRD50Q9ULJ7 1429 aa11.78□□□□□ -0.52
SNRNP200-203ENST00000480242 TSPOAP1O95153 1857 aa11.78□□□□□ -0.52
SNRNP200-203ENST00000480242 TIMELESSQ9UNS1 1208 aa11.78□□□□□ -0.52
SNRNP200-203ENST00000480242 NEXMIFQ5QGS0 1516 aa11.78□□□□□ -0.52
SNRNP200-203ENST00000480242 CHIC2Q9UKJ5 165 aa11.77□□□□□ -0.52
SNRNP200-203ENST00000480242 RTN4Q9NQC3 1192 aaKnown RBP11.77□□□□□ -0.53
SNRNP200-203ENST00000480242 ZFYVE9O95405 1425 aa11.76□□□□□ -0.53
SNRNP200-203ENST00000480242 PLEKHD1A6NEE1 506 aa11.76□□□□□ -0.53
SNRNP200-203ENST00000480242 ZNF777Q9ULD5 760 aaPredicted RBP11.76□□□□□ -0.53
SNRNP200-203ENST00000480242 USP32Q8NFA0 1604 aa11.75□□□□□ -0.53
SNRNP200-203ENST00000480242 CNGB1Q14028 1251 aaPredicted RBP11.75□□□□□ -0.53
SNRNP200-203ENST00000480242 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.75□□□□□ -0.53
SNRNP200-203ENST00000480242 MYOM1P52179 1685 aa11.75□□□□□ -0.53
SNRNP200-203ENST00000480242 DIP2AQ14689 1571 aa11.74□□□□□ -0.53
SNRNP200-203ENST00000480242 CNTLNQ9NXG0 1405 aa11.74□□□□□ -0.53
SNRNP200-203ENST00000480242 HIRIP3Q9BW71 556 aaPredicted RBP11.73□□□□□ -0.53
SNRNP200-203ENST00000480242 RALGAPBQ86X10 1494 aa11.73□□□□□ -0.53
SNRNP200-203ENST00000480242 ARHGEF28Q8N1W1 1705 aaKnown RBP11.73□□□□□ -0.53
SNRNP200-203ENST00000480242 ADGRB2O60241 1585 aa11.73□□□□□ -0.53
SNRNP200-203ENST00000480242 KIF15Q9NS87 1388 aa11.72□□□□□ -0.53
SNRNP200-203ENST00000480242 SLIT1O75093 1534 aa11.72□□□□□ -0.53
SNRNP200-203ENST00000480242 GPRASP1Q5JY77 1395 aa11.72□□□□□ -0.53
SNRNP200-203ENST00000480242 SCAPERQ9BY12 1400 aa11.72□□□□□ -0.53
SNRNP200-203ENST00000480242 ADGRB1O14514 1584 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms