RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 JPH4Q96JJ6 628 aa11.61□□□□□ -0.55
PBRM1-220ENST00000480064 PTPREP23469 700 aa11.58□□□□□ -0.56
PBRM1-220ENST00000480064 ZDHHC16Q969W1 377 aa11.58□□□□□ -0.56
PBRM1-220ENST00000480064 STAC3Q96MF2 364 aa11.58□□□□□ -0.56
PBRM1-220ENST00000480064 LMOD2Q6P5Q4 547 aa11.57□□□□□ -0.56
PBRM1-220ENST00000480064 VPS9D1Q9Y2B5 631 aa11.57□□□□□ -0.56
PBRM1-220ENST00000480064 WDR70Q9NW82 654 aa11.56□□□□□ -0.56
PBRM1-220ENST00000480064 CAMK2BQ13554 666 aa11.55□□□□□ -0.56
PBRM1-220ENST00000480064 SLC4A5Q9BY07 1137 aa11.55□□□□□ -0.56
PBRM1-220ENST00000480064 ADAM33Q9BZ11 813 aa11.55□□□□□ -0.56
PBRM1-220ENST00000480064 HCSTQ9UBK5 93 aa11.55□□□□□ -0.56
PBRM1-220ENST00000480064 PCDHGA10Q9Y5H3 936 aa11.52□□□□□ -0.57
PBRM1-220ENST00000480064 KCTD12Q96CX2 325 aaKnown RBP11.51□□□□□ -0.57
PBRM1-220ENST00000480064 ZBED2Q9BTP6 218 aa11.51□□□□□ -0.57
PBRM1-220ENST00000480064 DPYSL4O14531 572 aa11.49□□□□□ -0.57
PBRM1-220ENST00000480064 PHF14O94880 888 aa11.48□□□□□ -0.57
PBRM1-220ENST00000480064 BHMG1C9JSJ3 638 aaPredicted RBP11.47□□□□□ -0.57
PBRM1-220ENST00000480064 TYW1BQ6NUM6 668 aa11.47□□□□□ -0.57
PBRM1-220ENST00000480064 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.47□□□□□ -0.57
PBRM1-220ENST00000480064 FBXW7Q969H0 707 aa11.47□□□□□ -0.57
PBRM1-220ENST00000480064 BRPF1P55201 1214 aaPredicted RBP11.45□□□□□ -0.58
PBRM1-220ENST00000480064 KCNV2Q8TDN2 545 aa11.45□□□□□ -0.58
PBRM1-220ENST00000480064 PPP1R3GB7ZBB8 358 aa11.44□□□□□ -0.58
PBRM1-220ENST00000480064 NEUROD2Q15784 382 aa11.43□□□□□ -0.58
PBRM1-220ENST00000480064 EPAS1Q99814 870 aa11.43□□□□□ -0.58
PBRM1-220ENST00000480064 PLA2G2EQ9NZK7 142 aa11.43□□□□□ -0.58
PBRM1-220ENST00000480064 MRPL50Q8N5N7 158 aaKnown RBP11.42□□□□□ -0.58
PBRM1-220ENST00000480064 GOLGA8CPA6NN73 597 aa11.41□□□□□ -0.58
PBRM1-220ENST00000480064 COL9A1P20849 921 aa11.41□□□□□ -0.58
PBRM1-220ENST00000480064 NBPF3Q9H094 633 aa11.41□□□□□ -0.58
PBRM1-220ENST00000480064 SUPT5HO00267 1087 aaKnown RBP11.4□□□□□ -0.58
PBRM1-220ENST00000480064 PTPN5P54829 565 aa11.39□□□□□ -0.59
PBRM1-220ENST00000480064 DDX12PQ92771 950 aa11.39□□□□□ -0.59
PBRM1-220ENST00000480064 E2F4Q16254 413 aa11.38□□□□□ -0.59
PBRM1-220ENST00000480064 PROX2Q3B8N5 592 aa11.38□□□□□ -0.59
PBRM1-220ENST00000480064 C6orf132Q5T0Z8 1188 aa11.38□□□□□ -0.59
PBRM1-220ENST00000480064 RABGEF1Q9UJ41 708 aa11.38□□□□□ -0.59
PBRM1-220ENST00000480064 WNT2BQ93097 391 aa11.37□□□□□ -0.59
PBRM1-220ENST00000480064 PDIA6Q15084 440 aa11.36□□□□□ -0.59
PBRM1-220ENST00000480064 THSD4Q6ZMP0 1018 aa11.36□□□□□ -0.59
PBRM1-220ENST00000480064 RBM33Q96EV2 1170 aaKnown RBP11.36□□□□□ -0.59
PBRM1-220ENST00000480064 SPDYE16A6NNV3 312 aaPredicted RBP11.35□□□□□ -0.59
PBRM1-220ENST00000480064 RANGAP1P46060 587 aaPredicted RBP11.35□□□□□ -0.59
PBRM1-220ENST00000480064 ONECUT3O60422 494 aaPredicted RBP11.32□□□□□ -0.6
PBRM1-220ENST00000480064 KIAA1468Q9P260 1216 aa11.32□□□□□ -0.6
PBRM1-220ENST00000480064 ZC3H15Q8WU90 426 aaKnown RBP11.31□□□□□ -0.6
PBRM1-220ENST00000480064 ARIH1Q9Y4X5 557 aaPredicted RBP11.31□□□□□ -0.6
PBRM1-220ENST00000480064 EN1Q05925 392 aaPredicted RBP11.29□□□□□ -0.6
PBRM1-220ENST00000480064 LAPTM4BQ86VI4 370 aa11.29□□□□□ -0.6
PBRM1-220ENST00000480064 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
PBRM1-220ENST00000480064 TRIM6-TRIM34B2RNG4 842 aa11.28□□□□□ -0.6
PBRM1-220ENST00000480064 MAP3K7O43318 606 aa11.28□□□□□ -0.6
PBRM1-220ENST00000480064 ANKK1Q8NFD2 765 aa11.28□□□□□ -0.6
PBRM1-220ENST00000480064 ARHGEF1Q92888 912 aaKnown RBP11.28□□□□□ -0.6
PBRM1-220ENST00000480064 SLC24A3Q9HC58 644 aa11.28□□□□□ -0.6
PBRM1-220ENST00000480064 TSR1Q2NL82 804 aaKnown RBP11.26□□□□□ -0.61
PBRM1-220ENST00000480064 GRXCR2A6NFK2 248 aa11.25□□□□□ -0.61
PBRM1-220ENST00000480064 ZFRQ96KR1 1074 aaKnown RBP11.24□□□□□ -0.61
PBRM1-220ENST00000480064 SEPT9Q9UHD8 586 aaPredicted RBP11.24□□□□□ -0.61
PBRM1-220ENST00000480064 BCAMP50895 628 aa11.22□□□□□ -0.61
PBRM1-220ENST00000480064 SOWAHBA6NEL2 793 aa11.21□□□□□ -0.61
PBRM1-220ENST00000480064 PACS2Q86VP3 889 aa11.21□□□□□ -0.61
PBRM1-220ENST00000480064 PRIM1P49642 420 aaKnown RBP11.2□□□□□ -0.62
PBRM1-220ENST00000480064 FAM98CQ17RN3 349 aaKnown RBP11.2□□□□□ -0.62
PBRM1-220ENST00000480064 SMYD5Q6GMV2 418 aa11.2□□□□□ -0.62
PBRM1-220ENST00000480064 TSKSQ9UJT2 592 aa11.2□□□□□ -0.62
PBRM1-220ENST00000480064 IFFO2Q5TF58 517 aa11.19□□□□□ -0.62
PBRM1-220ENST00000480064 TESPA1A2RU30 521 aaPredicted RBP11.17□□□□□ -0.62
PBRM1-220ENST00000480064 OSBPP22059 807 aa11.17□□□□□ -0.62
PBRM1-220ENST00000480064 PRSS12P56730 875 aa11.17□□□□□ -0.62
PBRM1-220ENST00000480064 CERKQ8TCT0 537 aa11.17□□□□□ -0.62
PBRM1-220ENST00000480064 CDCA7LQ96GN5 454 aa11.17□□□□□ -0.62
PBRM1-220ENST00000480064 SEMA3EO15041 775 aa11.16□□□□□ -0.62
PBRM1-220ENST00000480064 NYAP1Q6ZVC0 841 aa11.14□□□□□ -0.63
PBRM1-220ENST00000480064 LRCH3Q96II8 777 aa11.14□□□□□ -0.63
PBRM1-220ENST00000480064 WBP1LQ9NX94 342 aa11.14□□□□□ -0.63
PBRM1-220ENST00000480064 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.14□□□□□ -0.63
PBRM1-220ENST00000480064 FAM198AQ9UFP1 575 aa11.13□□□□□ -0.63
PBRM1-220ENST00000480064 CDHR5Q9HBB8 845 aa11.12□□□□□ -0.63
PBRM1-220ENST00000480064 SMAPO00193 183 aa11.11□□□□□ -0.63
PBRM1-220ENST00000480064 ZMYND10O75800 440 aa11.11□□□□□ -0.63
PBRM1-220ENST00000480064 TSR3Q9UJK0 312 aaKnown RBP11.11□□□□□ -0.63
PBRM1-220ENST00000480064 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
PBRM1-220ENST00000480064 A0A0G2JS52 829 aa11.1□□□□□ -0.63
PBRM1-220ENST00000480064 RSPH6AQ9H0K4 717 aa11.1□□□□□ -0.63
PBRM1-220ENST00000480064 ITGBL1O95965 494 aaPredicted RBP11.09□□□□□ -0.63
PBRM1-220ENST00000480064 UBTFP17480 764 aaKnown RBP11.09□□□□□ -0.63
PBRM1-220ENST00000480064 TATDN2Q93075 761 aa11.09□□□□□ -0.63
PBRM1-220ENST00000480064 NBPF26B4DH59 902 aa11.08□□□□□ -0.64
PBRM1-220ENST00000480064 PNMA3Q9UL41 463 aa11.08□□□□□ -0.64
PBRM1-220ENST00000480064 C3orf80F5H4A9 247 aa11.07□□□□□ -0.64
PBRM1-220ENST00000480064 ZMYND15Q9H091 742 aa11.07□□□□□ -0.64
PBRM1-220ENST00000480064 RBM27Q9P2N5 1060 aaKnown RBP11.07□□□□□ -0.64
PBRM1-220ENST00000480064 RGS20O76081 388 aa11.06□□□□□ -0.64
PBRM1-220ENST00000480064 SAMD7Q7Z3H4 446 aa11.06□□□□□ -0.64
PBRM1-220ENST00000480064 PPP4CP60510 307 aa11.05□□□□□ -0.64
PBRM1-220ENST00000480064 NPDC1Q9NQX5 325 aaPredicted RBP11.05□□□□□ -0.64
PBRM1-220ENST00000480064 MLLT3P42568 568 aaPredicted RBP11.04□□□□□ -0.64
PBRM1-220ENST00000480064 BARGINQ6ZT62 677 aa11.04□□□□□ -0.64
PBRM1-220ENST00000480064 NUDT18Q6ZVK8 323 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms