RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 PKD2Q13563 968 aa15.84■□□□□ 0.13
VTI1A-204ENST00000480057 HECW2Q9P2P5 1572 aa15.83■□□□□ 0.13
VTI1A-204ENST00000480057 DHX29Q7Z478 1369 aaKnown RBP15.82■□□□□ 0.12
VTI1A-204ENST00000480057 TEX14Q8IWB6 1497 aa15.81■□□□□ 0.12
VTI1A-204ENST00000480057 BCORL1Q5H9F3 1711 aa15.8■□□□□ 0.12
VTI1A-204ENST00000480057 VWDEQ8N2E2 1590 aa15.79■□□□□ 0.12
VTI1A-204ENST00000480057 ATP10AO60312 1499 aa15.79■□□□□ 0.12
VTI1A-204ENST00000480057 RICTORQ6R327 1708 aa15.79■□□□□ 0.12
VTI1A-204ENST00000480057 PRDM15P57071 1507 aaPredicted RBP15.78■□□□□ 0.12
VTI1A-204ENST00000480057 A2MP01023 1474 aa15.78■□□□□ 0.12
VTI1A-204ENST00000480057 RNF17Q9BXT8 1623 aaKnown RBP15.76■□□□□ 0.11
VTI1A-204ENST00000480057 FAM69CQ0P6D2 419 aa15.76■□□□□ 0.11
VTI1A-204ENST00000480057 ZMYM4Q5VZL5 1548 aa15.76■□□□□ 0.11
VTI1A-204ENST00000480057 TET3O43151 1660 aa15.76■□□□□ 0.11
VTI1A-204ENST00000480057 PPRC1Q5VV67 1664 aaKnown RBP15.76■□□□□ 0.11
VTI1A-204ENST00000480057 KANK1Q14678 1352 aa15.75■□□□□ 0.11
VTI1A-204ENST00000480057 DIEXFQ68CQ4 756 aaKnown RBP15.75■□□□□ 0.11
VTI1A-204ENST00000480057 L3MBTL2Q969R5 705 aa15.74■□□□□ 0.11
VTI1A-204ENST00000480057 MROH1Q8NDA8 1641 aa15.74■□□□□ 0.11
VTI1A-204ENST00000480057 LMTK2Q8IWU2 1503 aa15.73■□□□□ 0.11
VTI1A-204ENST00000480057 ABCA6Q8N139 1617 aa15.73■□□□□ 0.11
VTI1A-204ENST00000480057 FRMPD1Q5SYB0 1578 aa15.72■□□□□ 0.11
VTI1A-204ENST00000480057 MYT1LQ9UL68 1186 aa15.72■□□□□ 0.11
VTI1A-204ENST00000480057 KIF13AQ9H1H9 1805 aa15.72■□□□□ 0.11
VTI1A-204ENST00000480057 DIP2CQ9Y2E4 1556 aa15.71■□□□□ 0.11
VTI1A-204ENST00000480057 CCDC144AA2RUR9 1427 aa15.71■□□□□ 0.11
VTI1A-204ENST00000480057 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.71■□□□□ 0.112e-8■■■□□ 18.7
VTI1A-204ENST00000480057 PLA2R1Q13018 1463 aa15.71■□□□□ 0.1
VTI1A-204ENST00000480057 E9PCH4 1651 aa15.7■□□□□ 0.1
VTI1A-204ENST00000480057 UHRF1BP1Q6BDS2 1440 aa15.69■□□□□ 0.1
VTI1A-204ENST00000480057 PTPRTO14522 1441 aa15.68■□□□□ 0.1
VTI1A-204ENST00000480057 TRPM2O94759 1503 aa15.68■□□□□ 0.1
VTI1A-204ENST00000480057 KIF3BO15066 747 aa15.68■□□□□ 0.1
VTI1A-204ENST00000480057 REREQ9P2R6 1566 aa15.67■□□□□ 0.1
VTI1A-204ENST00000480057 NEURL4Q96JN8 1562 aa15.66■□□□□ 0.1
VTI1A-204ENST00000480057 SPHKAPQ2M3C7 1700 aa15.66■□□□□ 0.1
VTI1A-204ENST00000480057 RAPGEF3O95398 923 aa15.66■□□□□ 0.1
VTI1A-204ENST00000480057 EFCAB6Q5THR3 1501 aa15.66■□□□□ 0.1
VTI1A-204ENST00000480057 TSPOAP1O95153 1857 aa15.65■□□□□ 0.1
VTI1A-204ENST00000480057 ZC3H13Q5T200 1668 aaKnown RBP15.63■□□□□ 0.09
VTI1A-204ENST00000480057 RALGAPBQ86X10 1494 aa15.61■□□□□ 0.09
VTI1A-204ENST00000480057 CEP152O94986 1710 aa15.61■□□□□ 0.09
VTI1A-204ENST00000480057 AGLP35573 1532 aa15.61■□□□□ 0.09
VTI1A-204ENST00000480057 NBPF8Q3BBV2 869 aa15.6■□□□□ 0.09
VTI1A-204ENST00000480057 STAC3Q96MF2 364 aa15.6■□□□□ 0.09
VTI1A-204ENST00000480057 YEATS2Q9ULM3 1422 aa15.6■□□□□ 0.09
VTI1A-204ENST00000480057 ABCC3O15438 1527 aa15.59■□□□□ 0.09
VTI1A-204ENST00000480057 MSH5O43196 834 aa15.59■□□□□ 0.09
VTI1A-204ENST00000480057 EIF4G2P78344 907 aaKnown RBP eCLIP15.59■□□□□ 0.09
VTI1A-204ENST00000480057 SPATA31E1Q6ZUB1 1445 aa15.59■□□□□ 0.09
VTI1A-204ENST00000480057 ARHGAP31Q2M1Z3 1444 aa15.58■□□□□ 0.08
VTI1A-204ENST00000480057 CLTCL1P53675 1640 aa15.57■□□□□ 0.08
VTI1A-204ENST00000480057 CAMSAP1Q5T5Y3 1602 aa15.57■□□□□ 0.08
VTI1A-204ENST00000480057 PPP6R1Q9UPN7 881 aa15.56■□□□□ 0.08
VTI1A-204ENST00000480057 ARHGEF40Q8TER5 1519 aa15.56■□□□□ 0.08
VTI1A-204ENST00000480057 PRAG1Q86YV5 1406 aa15.55■□□□□ 0.08
VTI1A-204ENST00000480057 CNTLNQ9NXG0 1405 aa15.55■□□□□ 0.08
VTI1A-204ENST00000480057 LAMC1P11047 1609 aa15.54■□□□□ 0.08
VTI1A-204ENST00000480057 HSPA5P11021 654 aaKnown RBP15.54■□□□□ 0.08
VTI1A-204ENST00000480057 NPATQ14207 1427 aa15.53■□□□□ 0.08
VTI1A-204ENST00000480057 DCAF11Q8TEB1 546 aa15.53■□□□□ 0.08
VTI1A-204ENST00000480057 TRPM1Q7Z4N2 1603 aa15.53■□□□□ 0.08
VTI1A-204ENST00000480057 WASHC2CQ9Y4E1 1318 aa15.52■□□□□ 0.08
VTI1A-204ENST00000480057 GGT6Q6P531 493 aa15.52■□□□□ 0.08
VTI1A-204ENST00000480057 KIF1BO60333 1816 aa15.52■□□□□ 0.07
VTI1A-204ENST00000480057 COL17A1Q9UMD9 1497 aaPredicted RBP15.52■□□□□ 0.07
VTI1A-204ENST00000480057 POLR1AO95602 1720 aaPredicted RBP15.51■□□□□ 0.07
VTI1A-204ENST00000480057 NOS1P29475 1434 aa15.51■□□□□ 0.07
VTI1A-204ENST00000480057 GPRASP1Q5JY77 1395 aa15.5■□□□□ 0.07
VTI1A-204ENST00000480057 ADGRB3O60242 1522 aa15.48■□□□□ 0.07
VTI1A-204ENST00000480057 MYOM2P54296 1465 aa15.48■□□□□ 0.07
VTI1A-204ENST00000480057 USP47Q96K76 1375 aa15.48■□□□□ 0.07
VTI1A-204ENST00000480057 PIK3C2BO00750 1634 aa15.47■□□□□ 0.07
VTI1A-204ENST00000480057 MADDQ8WXG6 1647 aa15.47■□□□□ 0.07
VTI1A-204ENST00000480057 ARID4BQ4LE39 1312 aaPredicted RBP15.46■□□□□ 0.07
VTI1A-204ENST00000480057 IFT172Q9UG01 1749 aa15.46■□□□□ 0.07
VTI1A-204ENST00000480057 KIAA1210Q9ULL0 1709 aa15.46■□□□□ 0.07
VTI1A-204ENST00000480057 RGL3Q3MIN7 710 aa15.46■□□□□ 0.07
VTI1A-204ENST00000480057 KDM2AQ9Y2K7 1162 aa15.46■□□□□ 0.07
VTI1A-204ENST00000480057 ZNF326Q5BKZ1 582 aaKnown RBP15.45■□□□□ 0.06
VTI1A-204ENST00000480057 MIER1Q8N108 512 aa15.45■□□□□ 0.06
VTI1A-204ENST00000480057 ROCK2O75116 1388 aaKnown RBP15.45■□□□□ 0.06
VTI1A-204ENST00000480057 SIGLEC1Q9BZZ2 1709 aa15.44■□□□□ 0.06
VTI1A-204ENST00000480057 HIRIP3Q9BW71 556 aaPredicted RBP15.44■□□□□ 0.06
VTI1A-204ENST00000480057 CARD11Q9BXL7 1154 aa15.44■□□□□ 0.06
VTI1A-204ENST00000480057 CCDC7Q96M83 1385 aa15.43■□□□□ 0.06
VTI1A-204ENST00000480057 SYNMO15061 1565 aa15.43■□□□□ 0.06
VTI1A-204ENST00000480057 UGGT1Q9NYU2 1555 aa15.43■□□□□ 0.06
VTI1A-204ENST00000480057 PREX1Q8TCU6 1659 aa15.43■□□□□ 0.06
VTI1A-204ENST00000480057 RPGRIP1LQ68CZ1 1315 aa15.43■□□□□ 0.06
VTI1A-204ENST00000480057 MROH2AA6NES4 1674 aa15.42■□□□□ 0.06
VTI1A-204ENST00000480057 NRXN1Q9ULB1 1477 aa15.42■□□□□ 0.06
VTI1A-204ENST00000480057 DDX10Q13206 875 aaKnown RBP15.42■□□□□ 0.06
VTI1A-204ENST00000480057 WASHC2AQ641Q2 1341 aa15.42■□□□□ 0.06
VTI1A-204ENST00000480057 DNAJC5Q9H3Z4 198 aa15.41■□□□□ 0.06
VTI1A-204ENST00000480057 SLC52A1Q9NWF4 448 aa15.41■□□□□ 0.06
VTI1A-204ENST00000480057 PPLO60437 1756 aa15.39■□□□□ 0.05
VTI1A-204ENST00000480057 CLTCQ00610 1675 aaKnown RBP15.38■□□□□ 0.05
VTI1A-204ENST00000480057 PIAS4Q8N2W9 510 aaPredicted RBP15.38■□□□□ 0.05
VTI1A-204ENST00000480057 ERVK-7P63135 1459 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms