RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 CEP170BQ9Y4F5 1589 aaPredicted RBP16.94■□□□□ 0.3
SMURF1-204ENST00000480055 CAPN15O75808 1086 aa16.93■□□□□ 0.3
SMURF1-204ENST00000480055 PLA2R1Q13018 1463 aa16.93■□□□□ 0.3
SMURF1-204ENST00000480055 POLR1AO95602 1720 aaPredicted RBP16.92■□□□□ 0.3
SMURF1-204ENST00000480055 SPINK5Q9NQ38 1064 aaPredicted RBP16.9■□□□□ 0.3
SMURF1-204ENST00000480055 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
SMURF1-204ENST00000480055 GPATCH8Q9UKJ3 1502 aaKnown RBP16.9■□□□□ 0.3
SMURF1-204ENST00000480055 ZMYM3Q14202 1370 aa16.89■□□□□ 0.3
SMURF1-204ENST00000480055 A2MP01023 1474 aa16.87■□□□□ 0.29
SMURF1-204ENST00000480055 PLEKHH2Q8IVE3 1493 aa16.87■□□□□ 0.29
SMURF1-204ENST00000480055 PTPRKQ15262 1439 aa16.87■□□□□ 0.29
SMURF1-204ENST00000480055 KIAA1107Q9UPP5 1409 aa16.87■□□□□ 0.29
SMURF1-204ENST00000480055 SPAG9O60271 1321 aaKnown RBP16.86■□□□□ 0.29
SMURF1-204ENST00000480055 ZNF335Q9H4Z2 1342 aaPredicted RBP16.85■□□□□ 0.29
SMURF1-204ENST00000480055 DNMT1P26358 1616 aaKnown RBP16.85■□□□□ 0.29
SMURF1-204ENST00000480055 NCKAP5LQ9HCH0 1330 aa16.84■□□□□ 0.29
SMURF1-204ENST00000480055 ATF5Q9Y2D1 282 aaPredicted RBP16.83■□□□□ 0.28
SMURF1-204ENST00000480055 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
SMURF1-204ENST00000480055 ZNF777Q9ULD5 760 aaPredicted RBP16.82■□□□□ 0.28
SMURF1-204ENST00000480055 TIAM1Q13009 1591 aa16.81■□□□□ 0.28
SMURF1-204ENST00000480055 NEURL4Q96JN8 1562 aa16.81■□□□□ 0.28
SMURF1-204ENST00000480055 A2ML1A8K2U0 1454 aa16.81■□□□□ 0.28
SMURF1-204ENST00000480055 PKD2Q13563 968 aa16.81■□□□□ 0.28
SMURF1-204ENST00000480055 HNRNPMP52272 730 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMURF1-204ENST00000480055 UBAP1LF5GYI3 381 aa16.78■□□□□ 0.28
SMURF1-204ENST00000480055 FAM135AQ9P2D6 1515 aa16.78■□□□□ 0.28
SMURF1-204ENST00000480055 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.28
SMURF1-204ENST00000480055 MED1Q15648 1581 aaPredicted RBP16.77■□□□□ 0.28
SMURF1-204ENST00000480055 CPS1P31327 1500 aa16.76■□□□□ 0.27
SMURF1-204ENST00000480055 EHBP1L1Q8N3D4 1523 aa16.75■□□□□ 0.27
SMURF1-204ENST00000480055 CFDP1Q9UEE9 299 aaPredicted RBP16.75■□□□□ 0.27
SMURF1-204ENST00000480055 MBD5Q9P267 1494 aa16.74■□□□□ 0.27
SMURF1-204ENST00000480055 KDM5DQ9BY66 1539 aa16.74■□□□□ 0.27
SMURF1-204ENST00000480055 RTEL1-TNFRSF6BF6WH68 1400 aa16.73■□□□□ 0.27
SMURF1-204ENST00000480055 GGT6Q6P531 493 aa16.73■□□□□ 0.27
SMURF1-204ENST00000480055 DEPDC5O75140 1603 aa16.72■□□□□ 0.27
SMURF1-204ENST00000480055 PZPP20742 1482 aa16.72■□□□□ 0.27
SMURF1-204ENST00000480055 VWDEQ8N2E2 1590 aa16.72■□□□□ 0.27
SMURF1-204ENST00000480055 MTUS2Q5JR59 1369 aa16.71■□□□□ 0.27
SMURF1-204ENST00000480055 SHANK2Q9UPX8 1470 aa16.7■□□□□ 0.26
SMURF1-204ENST00000480055 IQGAP1P46940 1657 aa16.69■□□□□ 0.26
SMURF1-204ENST00000480055 ALKQ9UM73 1620 aa16.69■□□□□ 0.26
SMURF1-204ENST00000480055 STRCP1A6NGW2 1772 aa16.69■□□□□ 0.26
SMURF1-204ENST00000480055 DHX29Q7Z478 1369 aaKnown RBP16.68■□□□□ 0.26
SMURF1-204ENST00000480055 TNRQ92752 1358 aa16.68■□□□□ 0.26
SMURF1-204ENST00000480055 ZC3H13Q5T200 1668 aaKnown RBP16.68■□□□□ 0.26
SMURF1-204ENST00000480055 CEP162Q5TB80 1403 aa16.67■□□□□ 0.26
SMURF1-204ENST00000480055 ZNF644Q9H582 1327 aaPredicted RBP16.67■□□□□ 0.26
SMURF1-204ENST00000480055 CCDC141Q6ZP82 1450 aa16.67■□□□□ 0.26
SMURF1-204ENST00000480055 SYNMO15061 1565 aa16.66■□□□□ 0.26
SMURF1-204ENST00000480055 RNF17Q9BXT8 1623 aaKnown RBP16.66■□□□□ 0.26
SMURF1-204ENST00000480055 UGGT1Q9NYU2 1555 aa16.65■□□□□ 0.26
SMURF1-204ENST00000480055 MED14O60244 1454 aa16.65■□□□□ 0.26
SMURF1-204ENST00000480055 CAMSAP2Q08AD1 1489 aa16.65■□□□□ 0.26
SMURF1-204ENST00000480055 NLRP1Q9C000 1473 aa16.65■□□□□ 0.26
SMURF1-204ENST00000480055 ARHGEF5Q12774 1597 aa16.64■□□□□ 0.25
SMURF1-204ENST00000480055 HSPA1LP34931 641 aa16.64■□□□□ 0.25
SMURF1-204ENST00000480055 EIF2AK4Q9P2K8 1649 aaKnown RBP16.61■□□□□ 0.25
SMURF1-204ENST00000480055 TOM1O60784 492 aa16.61■□□□□ 0.25
SMURF1-204ENST00000480055 FBXO31Q5XUX0 539 aaPredicted RBP16.61■□□□□ 0.25
SMURF1-204ENST00000480055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.61■□□□□ 0.25
SMURF1-204ENST00000480055 NPHP4O75161 1426 aaPredicted RBP16.61■□□□□ 0.25
SMURF1-204ENST00000480055 CFAP65Q6ZU64 1925 aaKnown RBP16.6■□□□□ 0.25
SMURF1-204ENST00000480055 CEP152O94986 1710 aa16.6■□□□□ 0.25
SMURF1-204ENST00000480055 PIP4K2BP78356 416 aa16.6■□□□□ 0.25
SMURF1-204ENST00000480055 MIA2Q96PC5 1412 aa16.6■□□□□ 0.25
SMURF1-204ENST00000480055 UBR1Q8IWV7 1749 aa16.59■□□□□ 0.25
SMURF1-204ENST00000480055 KIF3BO15066 747 aa16.59■□□□□ 0.25
SMURF1-204ENST00000480055 NCOA2Q15596 1464 aa16.59■□□□□ 0.25
SMURF1-204ENST00000480055 XIRP1Q702N8 1843 aaKnown RBP16.59■□□□□ 0.25
SMURF1-204ENST00000480055 MAST1Q9Y2H9 1570 aa16.58■□□□□ 0.24
SMURF1-204ENST00000480055 MROH1Q8NDA8 1641 aa16.57■□□□□ 0.24
SMURF1-204ENST00000480055 ABCC3O15438 1527 aa16.57■□□□□ 0.24
SMURF1-204ENST00000480055 ANKLE2Q86XL3 938 aa16.57■□□□□ 0.24
SMURF1-204ENST00000480055 WASHC2CQ9Y4E1 1318 aa16.56■□□□□ 0.24
SMURF1-204ENST00000480055 ABCB7O75027 752 aa16.56■□□□□ 0.24
SMURF1-204ENST00000480055 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
SMURF1-204ENST00000480055 POLA2Q14181 598 aa16.55■□□□□ 0.24
SMURF1-204ENST00000480055 THEMISQ8N1K5 641 aaPredicted RBP16.55■□□□□ 0.24
SMURF1-204ENST00000480055 DSG3P32926 999 aa16.54■□□□□ 0.24
SMURF1-204ENST00000480055 RSPH4AQ5TD94 716 aa16.53■□□□□ 0.24
SMURF1-204ENST00000480055 ERVK-7P63135 1459 aa16.53■□□□□ 0.24
SMURF1-204ENST00000480055 CROCC2H7BZ55 1655 aa16.49■□□□□ 0.23
SMURF1-204ENST00000480055 SLIT1O75093 1534 aa16.47■□□□□ 0.23
SMURF1-204ENST00000480055 SCAF11Q99590 1463 aaKnown RBP16.47■□□□□ 0.23
SMURF1-204ENST00000480055 KDM5AP29375 1690 aaKnown RBP16.46■□□□□ 0.23
SMURF1-204ENST00000480055 PRDM15P57071 1507 aaPredicted RBP16.46■□□□□ 0.23
SMURF1-204ENST00000480055 ARHGAP23Q9P227 1491 aa16.46■□□□□ 0.23
SMURF1-204ENST00000480055 PIK3C2BO00750 1634 aa16.45■□□□□ 0.22
SMURF1-204ENST00000480055 DUOX2Q9NRD8 1548 aa16.44■□□□□ 0.22
SMURF1-204ENST00000480055 TSPY4P0CV99 314 aa16.43■□□□□ 0.22
SMURF1-204ENST00000480055 TSPY10P0CW01 314 aa16.43■□□□□ 0.22
SMURF1-204ENST00000480055 LRRC9Q6ZRR7 1453 aa16.42■□□□□ 0.22
SMURF1-204ENST00000480055 ARHGAP31Q2M1Z3 1444 aa16.4■□□□□ 0.22
SMURF1-204ENST00000480055 ROBO1Q9Y6N7 1651 aa16.39■□□□□ 0.21
SMURF1-204ENST00000480055 MAP3K1Q13233 1512 aa16.37■□□□□ 0.21
SMURF1-204ENST00000480055 MYOM3Q5VTT5 1437 aa16.36■□□□□ 0.21
SMURF1-204ENST00000480055 VPS8Q8N3P4 1428 aa16.36■□□□□ 0.21
SMURF1-204ENST00000480055 ERBINQ96RT1 1412 aa16.36■□□□□ 0.21
SMURF1-204ENST00000480055 NWD1Q149M9 1564 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms