RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 ROCK2O75116 1388 aaKnown RBP26.28■■□□□ 1.8
TNFRSF8-204ENST00000479933 RBM19Q9Y4C8 960 aaKnown RBP26.27■■□□□ 1.8
TNFRSF8-204ENST00000479933 ERBINQ96RT1 1412 aa26.25■■□□□ 1.79
TNFRSF8-204ENST00000479933 EFCAB2Q5VUJ9 269 aa26.25■■□□□ 1.79
TNFRSF8-204ENST00000479933 CCDC144AA2RUR9 1427 aa26.25■■□□□ 1.79
TNFRSF8-204ENST00000479933 CARD11Q9BXL7 1154 aa26.24■■□□□ 1.79
TNFRSF8-204ENST00000479933 ARAP3Q8WWN8 1544 aa26.23■■□□□ 1.79
TNFRSF8-204ENST00000479933 MAGI2Q86UL8 1455 aa26.22■■□□□ 1.79
TNFRSF8-204ENST00000479933 ABCC1P33527 1531 aa26.22■■□□□ 1.79
TNFRSF8-204ENST00000479933 MRS2Q9HD23 443 aa26.22■■□□□ 1.79
TNFRSF8-204ENST00000479933 DCAF11Q8TEB1 546 aa26.2■■□□□ 1.79
TNFRSF8-204ENST00000479933 DHX29Q7Z478 1369 aaKnown RBP26.2■■□□□ 1.78
TNFRSF8-204ENST00000479933 MYT1LQ9UL68 1186 aa26.19■■□□□ 1.78
TNFRSF8-204ENST00000479933 CCDC184Q52MB2 194 aa26.18■■□□□ 1.78
TNFRSF8-204ENST00000479933 ATP10AO60312 1499 aa26.18■■□□□ 1.78
TNFRSF8-204ENST00000479933 KDM2AQ9Y2K7 1162 aa26.17■■□□□ 1.78
TNFRSF8-204ENST00000479933 TRPM1Q7Z4N2 1603 aa26.17■■□□□ 1.78
TNFRSF8-204ENST00000479933 ERICH6Q7L0X2 663 aa26.16■■□□□ 1.78
TNFRSF8-204ENST00000479933 PLA2R1Q13018 1463 aa26.15■■□□□ 1.78
TNFRSF8-204ENST00000479933 PRAG1Q86YV5 1406 aa26.15■■□□□ 1.78
TNFRSF8-204ENST00000479933 LAMC1P11047 1609 aa26.13■■□□□ 1.77
TNFRSF8-204ENST00000479933 BCANQ96GW7 911 aa26.12■■□□□ 1.77
TNFRSF8-204ENST00000479933 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.12■■□□□ 1.77
TNFRSF8-204ENST00000479933 RTEL1-TNFRSF6BF6WH68 1400 aa26.12■■□□□ 1.77
TNFRSF8-204ENST00000479933 ZBED9Q6R2W3 1325 aa26.11■■□□□ 1.77
TNFRSF8-204ENST00000479933 FAM9BQ8IZU0 186 aa26.11■■□□□ 1.77
TNFRSF8-204ENST00000479933 EIF2AK4Q9P2K8 1649 aaKnown RBP26.1■■□□□ 1.77
TNFRSF8-204ENST00000479933 FANCIQ9NVI1 1328 aa26.1■■□□□ 1.77
TNFRSF8-204ENST00000479933 POLR3GLQ9BT43 218 aa26.08■■□□□ 1.77
TNFRSF8-204ENST00000479933 GPRASP1Q5JY77 1395 aa26.08■■□□□ 1.77
TNFRSF8-204ENST00000479933 KTN1Q86UP2 1357 aaKnown RBP26.08■■□□□ 1.77
TNFRSF8-204ENST00000479933 ST20-MTHFSA0A0A6YYL1 179 aa26.08■■□□□ 1.76
TNFRSF8-204ENST00000479933 TRAPPC8Q9Y2L5 1435 aa26.07■■□□□ 1.76
TNFRSF8-204ENST00000479933 A2MP01023 1474 aa26.07■■□□□ 1.76
TNFRSF8-204ENST00000479933 E9PCH4 1651 aa26.06■■□□□ 1.76
TNFRSF8-204ENST00000479933 WDR7Q9Y4E6 1490 aa26.06■■□□□ 1.76
TNFRSF8-204ENST00000479933 ERICH6BQ5W0A0 696 aa26.05■■□□□ 1.76
TNFRSF8-204ENST00000479933 SPAG9O60271 1321 aaKnown RBP26.04■■□□□ 1.76
TNFRSF8-204ENST00000479933 MSH5O43196 834 aa26.03■■□□□ 1.76
TNFRSF8-204ENST00000479933 ZFYVE16Q7Z3T8 1539 aa26.03■■□□□ 1.76
TNFRSF8-204ENST00000479933 ABCA9Q8IUA7 1624 aa26.01■■□□□ 1.76
TNFRSF8-204ENST00000479933 PRDM15P57071 1507 aaPredicted RBP26.01■■□□□ 1.75
TNFRSF8-204ENST00000479933 RGL3Q3MIN7 710 aa26■■□□□ 1.75
TNFRSF8-204ENST00000479933 DEPDC5O75140 1603 aa25.99■■□□□ 1.75
TNFRSF8-204ENST00000479933 INO80Q9ULG1 1556 aaPredicted RBP25.96■■□□□ 1.75
TNFRSF8-204ENST00000479933 RALBP1Q15311 655 aa25.96■■□□□ 1.75
TNFRSF8-204ENST00000479933 FANCAO15360 1455 aa25.95■■□□□ 1.74
TNFRSF8-204ENST00000479933 TRPM2O94759 1503 aa25.94■■□□□ 1.74
TNFRSF8-204ENST00000479933 ATP7AQ04656 1500 aa25.93■■□□□ 1.74
TNFRSF8-204ENST00000479933 RNF17Q9BXT8 1623 aaKnown RBP25.93■■□□□ 1.74
TNFRSF8-204ENST00000479933 TET3O43151 1660 aa25.92■■□□□ 1.74
TNFRSF8-204ENST00000479933 STAC3Q96MF2 364 aa25.92■■□□□ 1.74
TNFRSF8-204ENST00000479933 SPHKAPQ2M3C7 1700 aa25.92■■□□□ 1.74
TNFRSF8-204ENST00000479933 BRD4O60885 1362 aaPredicted RBP25.92■■□□□ 1.74
TNFRSF8-204ENST00000479933 COL17A1Q9UMD9 1497 aaPredicted RBP25.91■■□□□ 1.74
TNFRSF8-204ENST00000479933 NBPF1Q3BBV0 1214 aa25.91■■□□□ 1.74
TNFRSF8-204ENST00000479933 AFAP1Q8N556 730 aa25.91■■□□□ 1.74
TNFRSF8-204ENST00000479933 MYBBP1AQ9BQG0 1328 aaKnown RBP25.91■■□□□ 1.74
TNFRSF8-204ENST00000479933 CEP152O94986 1710 aa25.9■■□□□ 1.74
TNFRSF8-204ENST00000479933 TMC1Q8TDI8 760 aa25.9■■□□□ 1.74
TNFRSF8-204ENST00000479933 KANK1Q14678 1352 aa25.89■■□□□ 1.73
TNFRSF8-204ENST00000479933 PTPRTO14522 1441 aa25.89■■□□□ 1.73
TNFRSF8-204ENST00000479933 PNISRQ8TF01 805 aaKnown RBP25.88■■□□□ 1.73
TNFRSF8-204ENST00000479933 SMG6Q86US8 1419 aaKnown RBP25.88■■□□□ 1.73
TNFRSF8-204ENST00000479933 VWDEQ8N2E2 1590 aa25.87■■□□□ 1.73
TNFRSF8-204ENST00000479933 ADGRL1O94910 1474 aa25.86■■□□□ 1.73
TNFRSF8-204ENST00000479933 WASHC2CQ9Y4E1 1318 aa25.85■■□□□ 1.73
TNFRSF8-204ENST00000479933 MADDQ8WXG6 1647 aa25.85■■□□□ 1.73
TNFRSF8-204ENST00000479933 ASXL2Q76L83 1435 aa25.84■■□□□ 1.73
TNFRSF8-204ENST00000479933 NEURL4Q96JN8 1562 aa25.83■■□□□ 1.73
TNFRSF8-204ENST00000479933 TESK2Q96S53 571 aa25.83■■□□□ 1.73
TNFRSF8-204ENST00000479933 LRPPRCP42704 1394 aaKnown RBP25.83■■□□□ 1.72
TNFRSF8-204ENST00000479933 CNGB1Q14028 1251 aaPredicted RBP25.82■■□□□ 1.72
TNFRSF8-204ENST00000479933 SCAPERQ9BY12 1400 aa25.82■■□□□ 1.72
TNFRSF8-204ENST00000479933 PPP4R2Q9NY27 417 aa25.82■■□□□ 1.72
TNFRSF8-204ENST00000479933 PARD3Q8TEW0 1356 aa25.81■■□□□ 1.72
TNFRSF8-204ENST00000479933 TMF1P82094 1093 aa25.81■■□□□ 1.72
TNFRSF8-204ENST00000479933 CLTCL1P53675 1640 aa25.8■■□□□ 1.72
TNFRSF8-204ENST00000479933 IQGAP1P46940 1657 aa25.79■■□□□ 1.72
TNFRSF8-204ENST00000479933 DISP3Q9P2K9 1392 aa25.78■■□□□ 1.72
TNFRSF8-204ENST00000479933 IRX6P78412 446 aaPredicted RBP25.78■■□□□ 1.72
TNFRSF8-204ENST00000479933 NLRP13Q86W25 1043 aa25.78■■□□□ 1.72
TNFRSF8-204ENST00000479933 NUDCQ9Y266 331 aa25.78■■□□□ 1.72
TNFRSF8-204ENST00000479933 PER1O15534 1290 aaPredicted RBP25.76■■□□□ 1.71
TNFRSF8-204ENST00000479933 CFAP74Q9C0B2 1584 aa25.76■■□□□ 1.71
TNFRSF8-204ENST00000479933 KIAA1210Q9ULL0 1709 aa25.75■■□□□ 1.71
TNFRSF8-204ENST00000479933 MROH1Q8NDA8 1641 aa25.74■■□□□ 1.71
TNFRSF8-204ENST00000479933 KIF3BO15066 747 aa25.73■■□□□ 1.71
TNFRSF8-204ENST00000479933 ZNF518AQ6AHZ1 1483 aa25.72■■□□□ 1.71
TNFRSF8-204ENST00000479933 NPM1P06748 294 aaKnown RBP eCLIP25.72■■□□□ 1.71
TNFRSF8-204ENST00000479933 KIDINS220Q9ULH0 1771 aa25.72■■□□□ 1.71
TNFRSF8-204ENST00000479933 SCAF11Q99590 1463 aaKnown RBP25.7■■□□□ 1.71
TNFRSF8-204ENST00000479933 DEKP35659 375 aaKnown RBP25.7■■□□□ 1.7
TNFRSF8-204ENST00000479933 INSRP06213 1382 aa25.69■■□□□ 1.7
TNFRSF8-204ENST00000479933 CDCA8Q53HL2 280 aa25.69■■□□□ 1.7
TNFRSF8-204ENST00000479933 EFCAB6Q5THR3 1501 aa25.68■■□□□ 1.7
TNFRSF8-204ENST00000479933 ZMYM4Q5VZL5 1548 aa25.68■■□□□ 1.7
TNFRSF8-204ENST00000479933 OSCARQ8IYS5 282 aa25.68■■□□□ 1.7
TNFRSF8-204ENST00000479933 RNF123Q5XPI4 1314 aa25.68■■□□□ 1.7
TNFRSF8-204ENST00000479933 LMTK2Q8IWU2 1503 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms