RNA–Protein interactions for RNA: ENST00000479820.1

SEMA6C-206, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-206ENST00000479820 NCOA1Q15788 1441 aa24■■□□□ 1.43
SEMA6C-206ENST00000479820 TCOF1Q13428 1488 aaKnown RBP23.99■■□□□ 1.43
SEMA6C-206ENST00000479820 DNMT1P26358 1616 aaKnown RBP23.99■■□□□ 1.43
SEMA6C-206ENST00000479820 MROH1Q8NDA8 1641 aa23.99■■□□□ 1.43
SEMA6C-206ENST00000479820 TSPY4P0CV99 314 aa23.98■■□□□ 1.43
SEMA6C-206ENST00000479820 TSPY10P0CW01 314 aa23.98■■□□□ 1.43
SEMA6C-206ENST00000479820 PTPRTO14522 1441 aa23.97■■□□□ 1.43
SEMA6C-206ENST00000479820 CAMSAP1Q5T5Y3 1602 aa23.97■■□□□ 1.43
SEMA6C-206ENST00000479820 PZPP20742 1482 aa23.96■■□□□ 1.43
SEMA6C-206ENST00000479820 FGD6Q6ZV73 1430 aa23.95■■□□□ 1.42
SEMA6C-206ENST00000479820 KIF3BO15066 747 aa23.95■■□□□ 1.42
SEMA6C-206ENST00000479820 FBXO41Q8TF61 875 aa23.95■■□□□ 1.42
SEMA6C-206ENST00000479820 DUOX2Q9NRD8 1548 aa23.94■■□□□ 1.42
SEMA6C-206ENST00000479820 PLA2R1Q13018 1463 aa23.94■■□□□ 1.42
SEMA6C-206ENST00000479820 APLP2Q06481 763 aa23.93■■□□□ 1.42
SEMA6C-206ENST00000479820 ABCC5O15440 1437 aa23.93■■□□□ 1.42
SEMA6C-206ENST00000479820 DMRT2Q9Y5R5 561 aa23.92■■□□□ 1.42
SEMA6C-206ENST00000479820 ABCC3O15438 1527 aa23.91■■□□□ 1.42
SEMA6C-206ENST00000479820 CEP152O94986 1710 aa23.9■■□□□ 1.42
SEMA6C-206ENST00000479820 A2ML1A8K2U0 1454 aa23.9■■□□□ 1.42
SEMA6C-206ENST00000479820 DEPDC5O75140 1603 aa23.89■■□□□ 1.42
SEMA6C-206ENST00000479820 DAPK1P53355 1430 aa23.89■■□□□ 1.41
SEMA6C-206ENST00000479820 PRDM15P57071 1507 aaPredicted RBP23.88■■□□□ 1.41
SEMA6C-206ENST00000479820 POLR1AO95602 1720 aaPredicted RBP23.87■■□□□ 1.41
SEMA6C-206ENST00000479820 ERBINQ96RT1 1412 aa23.85■■□□□ 1.41
SEMA6C-206ENST00000479820 SPATA31D1Q6ZQQ2 1576 aa23.85■■□□□ 1.41
SEMA6C-206ENST00000479820 LTBP4Q8N2S1 1624 aa23.84■■□□□ 1.41
SEMA6C-206ENST00000479820 WASHC2CQ9Y4E1 1318 aa23.84■■□□□ 1.41
SEMA6C-206ENST00000479820 TNRQ92752 1358 aa23.83■■□□□ 1.41
SEMA6C-206ENST00000479820 KIF15Q9NS87 1388 aa23.83■■□□□ 1.41
SEMA6C-206ENST00000479820 CERKQ8TCT0 537 aa23.82■■□□□ 1.4
SEMA6C-206ENST00000479820 NLRP1Q9C000 1473 aa23.81■■□□□ 1.4
SEMA6C-206ENST00000479820 CFAP65Q6ZU64 1925 aaKnown RBP23.8■■□□□ 1.4
SEMA6C-206ENST00000479820 ADGRL2O95490 1459 aa23.8■■□□□ 1.4
SEMA6C-206ENST00000479820 NEURL4Q96JN8 1562 aa23.78■■□□□ 1.4
SEMA6C-206ENST00000479820 FBXO31Q5XUX0 539 aaPredicted RBP23.78■■□□□ 1.4
SEMA6C-206ENST00000479820 ERVK-7P63135 1459 aa23.77■■□□□ 1.4
SEMA6C-206ENST00000479820 PKD2Q13563 968 aa23.77■■□□□ 1.4
SEMA6C-206ENST00000479820 VWDEQ8N2E2 1590 aa23.77■■□□□ 1.4
SEMA6C-206ENST00000479820 IQSEC2Q5JU85 1478 aa23.75■■□□□ 1.39
SEMA6C-206ENST00000479820 ARHGAP31Q2M1Z3 1444 aa23.74■■□□□ 1.39
SEMA6C-206ENST00000479820 UGGT1Q9NYU2 1555 aa23.74■■□□□ 1.39
SEMA6C-206ENST00000479820 NCKAP5LQ9HCH0 1330 aa23.73■■□□□ 1.39
SEMA6C-206ENST00000479820 ANKRD30AQ9BXX3 1397 aa23.73■■□□□ 1.39
SEMA6C-206ENST00000479820 LMTK2Q8IWU2 1503 aa23.72■■□□□ 1.39
SEMA6C-206ENST00000479820 UBR1Q8IWV7 1749 aa23.72■■□□□ 1.39
SEMA6C-206ENST00000479820 RRP7BPQ9NSQ0 103 aa23.69■■□□□ 1.38
SEMA6C-206ENST00000479820 MED14O60244 1454 aa23.66■■□□□ 1.38
SEMA6C-206ENST00000479820 KDM5AP29375 1690 aaKnown RBP23.66■■□□□ 1.38
SEMA6C-206ENST00000479820 EFCAB6Q5THR3 1501 aa23.64■■□□□ 1.37
SEMA6C-206ENST00000479820 IQGAP1P46940 1657 aa23.64■■□□□ 1.37
SEMA6C-206ENST00000479820 CHIC2Q9UKJ5 165 aa23.62■■□□□ 1.37
SEMA6C-206ENST00000479820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.62■■□□□ 1.37
SEMA6C-206ENST00000479820 THEMISQ8N1K5 641 aaPredicted RBP23.61■■□□□ 1.37
SEMA6C-206ENST00000479820 UNC13BO14795 1591 aa23.61■■□□□ 1.37
SEMA6C-206ENST00000479820 ZNF335Q9H4Z2 1342 aaPredicted RBP23.6■■□□□ 1.37
SEMA6C-206ENST00000479820 PIK3C2BO00750 1634 aa23.6■■□□□ 1.37
SEMA6C-206ENST00000479820 KANK1Q14678 1352 aa23.6■■□□□ 1.37
SEMA6C-206ENST00000479820 SLIT1O75093 1534 aa23.59■■□□□ 1.37
SEMA6C-206ENST00000479820 ANKRD50Q9ULJ7 1429 aa23.59■■□□□ 1.37
SEMA6C-206ENST00000479820 TET3O43151 1660 aa23.58■■□□□ 1.37
SEMA6C-206ENST00000479820 GCC2Q8IWJ2 1684 aa23.58■■□□□ 1.37
SEMA6C-206ENST00000479820 SYNMO15061 1565 aa23.58■■□□□ 1.37
SEMA6C-206ENST00000479820 ARHGAP23Q9P227 1491 aa23.58■■□□□ 1.37
SEMA6C-206ENST00000479820 FAM50AQ14320 339 aaKnown RBP23.58■■□□□ 1.37
SEMA6C-206ENST00000479820 ROCK1Q13464 1354 aa23.55■■□□□ 1.36
SEMA6C-206ENST00000479820 CPS1P31327 1500 aa23.55■■□□□ 1.36
SEMA6C-206ENST00000479820 ANKLE2Q86XL3 938 aa23.55■■□□□ 1.36
SEMA6C-206ENST00000479820 NPHP4O75161 1426 aaPredicted RBP23.55■■□□□ 1.36
SEMA6C-206ENST00000479820 NOS1P29475 1434 aa23.54■■□□□ 1.36
SEMA6C-206ENST00000479820 STRCP1A6NGW2 1772 aa23.53■■□□□ 1.36
SEMA6C-206ENST00000479820 RPRD2Q5VT52 1461 aaKnown RBP23.53■■□□□ 1.36
SEMA6C-206ENST00000479820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.52■■□□□ 1.36
SEMA6C-206ENST00000479820 IQGAP3Q86VI3 1631 aa23.51■■□□□ 1.35
SEMA6C-206ENST00000479820 SCAF11Q99590 1463 aaKnown RBP23.49■■□□□ 1.35
SEMA6C-206ENST00000479820 ADGRB3O60242 1522 aa23.48■■□□□ 1.35
SEMA6C-206ENST00000479820 E9PCH4 1651 aa23.47■■□□□ 1.35
SEMA6C-206ENST00000479820 MYO5BQ9ULV0 1848 aa23.47■■□□□ 1.35
SEMA6C-206ENST00000479820 RRBP1Q9P2E9 1410 aaKnown RBP23.44■■□□□ 1.34
SEMA6C-206ENST00000479820 TMEM2Q9UHN6 1383 aa23.42■■□□□ 1.34
SEMA6C-206ENST00000479820 LTKP29376 864 aa23.4■■□□□ 1.34
SEMA6C-206ENST00000479820 XIRP1Q702N8 1843 aaKnown RBP23.39■■□□□ 1.33
SEMA6C-206ENST00000479820 IDI1Q13907 227 aa23.39■■□□□ 1.33
SEMA6C-206ENST00000479820 TMEM131LA2VDJ0 1609 aa23.39■■□□□ 1.33
SEMA6C-206ENST00000479820 ALKQ9UM73 1620 aa23.38■■□□□ 1.33
SEMA6C-206ENST00000479820 SLC52A1Q9NWF4 448 aa23.36■■□□□ 1.33
SEMA6C-206ENST00000479820 LRRC7Q96NW7 1537 aa23.36■■□□□ 1.33
SEMA6C-206ENST00000479820 PPARGC1BQ86YN6 1023 aaKnown RBP23.35■■□□□ 1.33
SEMA6C-206ENST00000479820 TXNDC2Q86VQ3 553 aa23.34■■□□□ 1.33
SEMA6C-206ENST00000479820 UBAP1LF5GYI3 381 aa23.33■■□□□ 1.33
SEMA6C-206ENST00000479820 ZFYVE9O95405 1425 aa23.33■■□□□ 1.32
SEMA6C-206ENST00000479820 SPHKAPQ2M3C7 1700 aa23.31■■□□□ 1.32
SEMA6C-206ENST00000479820 EID1Q9Y6B2 187 aa23.31■■□□□ 1.32
SEMA6C-206ENST00000479820 NWD1Q149M9 1564 aa23.29■■□□□ 1.32
SEMA6C-206ENST00000479820 STAG3Q9UJ98 1225 aa23.28■■□□□ 1.32
SEMA6C-206ENST00000479820 NUP155O75694 1391 aa23.27■■□□□ 1.32
SEMA6C-206ENST00000479820 ITGAEP38570 1179 aa23.26■■□□□ 1.31
SEMA6C-206ENST00000479820 NAIPQ13075 1403 aa23.25■■□□□ 1.31
SEMA6C-206ENST00000479820 CHD2O14647 1828 aaKnown RBP23.25■■□□□ 1.31
SEMA6C-206ENST00000479820 TOM1O60784 492 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms