RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 RAPGEF3O95398 923 aa20.6■□□□□ 0.89
CLDN18-203ENST00000479660 MLH3Q9UHC1 1453 aa20.58■□□□□ 0.89
CLDN18-203ENST00000479660 TEX14Q8IWB6 1497 aa20.58■□□□□ 0.88
CLDN18-203ENST00000479660 KIF3BO15066 747 aa20.58■□□□□ 0.88
CLDN18-203ENST00000479660 HECW2Q9P2P5 1572 aa20.55■□□□□ 0.88
CLDN18-203ENST00000479660 A2MP01023 1474 aa20.53■□□□□ 0.88
CLDN18-203ENST00000479660 DEPDC5O75140 1603 aa20.53■□□□□ 0.88
CLDN18-203ENST00000479660 EIF2AK4Q9P2K8 1649 aaKnown RBP20.53■□□□□ 0.88
CLDN18-203ENST00000479660 KANK1Q14678 1352 aa20.52■□□□□ 0.88
CLDN18-203ENST00000479660 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
CLDN18-203ENST00000479660 TSPOAP1O95153 1857 aa20.5■□□□□ 0.87
CLDN18-203ENST00000479660 PLA2R1Q13018 1463 aa20.5■□□□□ 0.87
CLDN18-203ENST00000479660 RICTORQ6R327 1708 aa20.49■□□□□ 0.87
CLDN18-203ENST00000479660 NBPF8Q3BBV2 869 aa20.49■□□□□ 0.87
CLDN18-203ENST00000479660 HIRIP3Q9BW71 556 aaPredicted RBP20.48■□□□□ 0.87
CLDN18-203ENST00000479660 PPRC1Q5VV67 1664 aaKnown RBP20.46■□□□□ 0.87
CLDN18-203ENST00000479660 ATP10AO60312 1499 aa20.46■□□□□ 0.87
CLDN18-203ENST00000479660 ABCA6Q8N139 1617 aa20.46■□□□□ 0.87
CLDN18-203ENST00000479660 PRDM15P57071 1507 aaPredicted RBP20.46■□□□□ 0.87
CLDN18-203ENST00000479660 VWDEQ8N2E2 1590 aa20.46■□□□□ 0.87
CLDN18-203ENST00000479660 FRMPD1Q5SYB0 1578 aa20.45■□□□□ 0.86
CLDN18-203ENST00000479660 MROH1Q8NDA8 1641 aa20.45■□□□□ 0.86
CLDN18-203ENST00000479660 KIF13AQ9H1H9 1805 aa20.43■□□□□ 0.86
CLDN18-203ENST00000479660 E9PCH4 1651 aa20.43■□□□□ 0.86
CLDN18-203ENST00000479660 TET3O43151 1660 aa20.43■□□□□ 0.86
CLDN18-203ENST00000479660 DIP2CQ9Y2E4 1556 aa20.41■□□□□ 0.86
CLDN18-203ENST00000479660 ZNF326Q5BKZ1 582 aaKnown RBP20.41■□□□□ 0.86
CLDN18-203ENST00000479660 GGT6Q6P531 493 aa20.41■□□□□ 0.86
CLDN18-203ENST00000479660 RNF17Q9BXT8 1623 aaKnown RBP20.41■□□□□ 0.86
CLDN18-203ENST00000479660 DCAF11Q8TEB1 546 aa20.41■□□□□ 0.86
CLDN18-203ENST00000479660 YEATS2Q9ULM3 1422 aa20.4■□□□□ 0.86
CLDN18-203ENST00000479660 EIF4G2P78344 907 aaKnown RBP eCLIP20.4■□□□□ 0.86
CLDN18-203ENST00000479660 RGL3Q3MIN7 710 aa20.39■□□□□ 0.86
CLDN18-203ENST00000479660 KDM2AQ9Y2K7 1162 aa20.39■□□□□ 0.86
CLDN18-203ENST00000479660 ZMYM4Q5VZL5 1548 aa20.38■□□□□ 0.85
CLDN18-203ENST00000479660 PTPRTO14522 1441 aa20.38■□□□□ 0.85
CLDN18-203ENST00000479660 UHRF1BP1Q6BDS2 1440 aa20.38■□□□□ 0.85
CLDN18-203ENST00000479660 HSPA5P11021 654 aaKnown RBP20.37■□□□□ 0.85
CLDN18-203ENST00000479660 BCORL1Q5H9F3 1711 aa20.37■□□□□ 0.85
CLDN18-203ENST00000479660 MIER1Q8N108 512 aa20.36■□□□□ 0.85
CLDN18-203ENST00000479660 TRPM2O94759 1503 aa20.36■□□□□ 0.85
CLDN18-203ENST00000479660 LMTK2Q8IWU2 1503 aa20.36■□□□□ 0.85
CLDN18-203ENST00000479660 SPHKAPQ2M3C7 1700 aa20.35■□□□□ 0.85
CLDN18-203ENST00000479660 EFCAB6Q5THR3 1501 aa20.34■□□□□ 0.85
CLDN18-203ENST00000479660 WASHC2CQ9Y4E1 1318 aa20.34■□□□□ 0.85
CLDN18-203ENST00000479660 DDX10Q13206 875 aaKnown RBP20.32■□□□□ 0.84
CLDN18-203ENST00000479660 CEP152O94986 1710 aa20.32■□□□□ 0.84
CLDN18-203ENST00000479660 COL17A1Q9UMD9 1497 aaPredicted RBP20.3■□□□□ 0.84
CLDN18-203ENST00000479660 SPATA31E1Q6ZUB1 1445 aa20.29■□□□□ 0.84
CLDN18-203ENST00000479660 RALGAPBQ86X10 1494 aa20.28■□□□□ 0.84
CLDN18-203ENST00000479660 ABCC3O15438 1527 aa20.28■□□□□ 0.84
CLDN18-203ENST00000479660 CLTCL1P53675 1640 aa20.27■□□□□ 0.84
CLDN18-203ENST00000479660 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
CLDN18-203ENST00000479660 NPATQ14207 1427 aa20.26■□□□□ 0.83
CLDN18-203ENST00000479660 CARD11Q9BXL7 1154 aa20.26■□□□□ 0.83
CLDN18-203ENST00000479660 USP47Q96K76 1375 aa20.24■□□□□ 0.83
CLDN18-203ENST00000479660 REREQ9P2R6 1566 aa20.22■□□□□ 0.83
CLDN18-203ENST00000479660 ROCK2O75116 1388 aaKnown RBP20.22■□□□□ 0.83
CLDN18-203ENST00000479660 WASHC2AQ641Q2 1341 aa20.22■□□□□ 0.83
CLDN18-203ENST00000479660 UGGT1Q9NYU2 1555 aa20.21■□□□□ 0.83
CLDN18-203ENST00000479660 CFAP65Q6ZU64 1925 aaKnown RBP20.21■□□□□ 0.83
CLDN18-203ENST00000479660 CAMSAP1Q5T5Y3 1602 aa20.21■□□□□ 0.83
CLDN18-203ENST00000479660 STAC3Q96MF2 364 aa20.2■□□□□ 0.83
CLDN18-203ENST00000479660 ZC3H13Q5T200 1668 aaKnown RBP20.19■□□□□ 0.82
CLDN18-203ENST00000479660 CNTLNQ9NXG0 1405 aa20.19■□□□□ 0.82
CLDN18-203ENST00000479660 AGLP35573 1532 aa20.19■□□□□ 0.82
CLDN18-203ENST00000479660 C11orf95C9JLR9 678 aaPredicted RBP20.19■□□□□ 0.82
CLDN18-203ENST00000479660 TRHP20396 242 aaPredicted RBP20.19■□□□□ 0.82
CLDN18-203ENST00000479660 TRPM1Q7Z4N2 1603 aa20.19■□□□□ 0.82
CLDN18-203ENST00000479660 NEURL4Q96JN8 1562 aa20.18■□□□□ 0.82
CLDN18-203ENST00000479660 ARHGAP31Q2M1Z3 1444 aa20.18■□□□□ 0.82
CLDN18-203ENST00000479660 NBPF1Q3BBV0 1214 aa20.17■□□□□ 0.82
CLDN18-203ENST00000479660 ARHGEF40Q8TER5 1519 aa20.17■□□□□ 0.82
CLDN18-203ENST00000479660 KIF1BO60333 1816 aa20.16■□□□□ 0.82
CLDN18-203ENST00000479660 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
CLDN18-203ENST00000479660 NOS1P29475 1434 aa20.16■□□□□ 0.82
CLDN18-203ENST00000479660 CCDC7Q96M83 1385 aa20.15■□□□□ 0.82
CLDN18-203ENST00000479660 GPRASP1Q5JY77 1395 aa20.14■□□□□ 0.82
CLDN18-203ENST00000479660 CHGAP10645 457 aaKnown RBP20.14■□□□□ 0.81
CLDN18-203ENST00000479660 DNAJC5Q9H3Z4 198 aa20.14■□□□□ 0.81
CLDN18-203ENST00000479660 SIGLEC1Q9BZZ2 1709 aa20.13■□□□□ 0.81
CLDN18-203ENST00000479660 ST20-MTHFSA0A0A6YYL1 179 aa20.12■□□□□ 0.81
CLDN18-203ENST00000479660 MLECQ14165 292 aa20.12■□□□□ 0.81
CLDN18-203ENST00000479660 KIF7Q2M1P5 1343 aa20.11■□□□□ 0.81
CLDN18-203ENST00000479660 MADDQ8WXG6 1647 aa20.11■□□□□ 0.81
CLDN18-203ENST00000479660 ADGRB3O60242 1522 aa20.09■□□□□ 0.81
CLDN18-203ENST00000479660 MROH2AA6NES4 1674 aa20.09■□□□□ 0.81
CLDN18-203ENST00000479660 ANP32CO43423 234 aa20.09■□□□□ 0.81
CLDN18-203ENST00000479660 SYNMO15061 1565 aa20.08■□□□□ 0.81
CLDN18-203ENST00000479660 SLC52A1Q9NWF4 448 aa20.08■□□□□ 0.8
CLDN18-203ENST00000479660 LAMC1P11047 1609 aa20.07■□□□□ 0.8
CLDN18-203ENST00000479660 POLR1AO95602 1720 aaPredicted RBP20.07■□□□□ 0.8
CLDN18-203ENST00000479660 MYOM2P54296 1465 aa20.07■□□□□ 0.8
CLDN18-203ENST00000479660 IDI1Q13907 227 aa20.07■□□□□ 0.8
CLDN18-203ENST00000479660 ARID4BQ4LE39 1312 aaPredicted RBP20.06■□□□□ 0.8
CLDN18-203ENST00000479660 PIK3C2BO00750 1634 aa20.06■□□□□ 0.8
CLDN18-203ENST00000479660 ADGRF5Q8IZF2 1346 aa20.05■□□□□ 0.8
CLDN18-203ENST00000479660 FBXO31Q5XUX0 539 aaPredicted RBP20.05■□□□□ 0.8
CLDN18-203ENST00000479660 PREX1Q8TCU6 1659 aa20.04■□□□□ 0.8
CLDN18-203ENST00000479660 RPGRIP1LQ68CZ1 1315 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms