RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 HSPA2P54652 639 aa14.07□□□□□ -0.16
CMTM1-208ENST00000479381 CNTLNQ9NXG0 1405 aa14.07□□□□□ -0.16
CMTM1-208ENST00000479381 MBD5Q9P267 1494 aa14.06□□□□□ -0.16
CMTM1-208ENST00000479381 PREX1Q8TCU6 1659 aa14.05□□□□□ -0.16
CMTM1-208ENST00000479381 KIF3BO15066 747 aa14.05□□□□□ -0.16
CMTM1-208ENST00000479381 RTEL1-TNFRSF6BF6WH68 1400 aa14.05□□□□□ -0.16
CMTM1-208ENST00000479381 UHRF1BP1Q6BDS2 1440 aa14.05□□□□□ -0.16
CMTM1-208ENST00000479381 MIA2Q96PC5 1412 aa14.05□□□□□ -0.16
CMTM1-208ENST00000479381 ARHGEF5Q12774 1597 aa14.05□□□□□ -0.16
CMTM1-208ENST00000479381 C3P01024 1663 aa14.04□□□□□ -0.16
CMTM1-208ENST00000479381 CLTCQ00610 1675 aaKnown RBP14.04□□□□□ -0.16
CMTM1-208ENST00000479381 LMTK3Q96Q04 1460 aa14.04□□□□□ -0.16
CMTM1-208ENST00000479381 PTPN23Q9H3S7 1636 aa14.04□□□□□ -0.16
CMTM1-208ENST00000479381 FAM50AQ14320 339 aaKnown RBP14.03□□□□□ -0.16
CMTM1-208ENST00000479381 PLXNC1O60486 1568 aa14.02□□□□□ -0.16
CMTM1-208ENST00000479381 SPINK5Q9NQ38 1064 aaPredicted RBP14.02□□□□□ -0.17
CMTM1-208ENST00000479381 DHX29Q7Z478 1369 aaKnown RBP14.01□□□□□ -0.17
CMTM1-208ENST00000479381 ZBTB22O15209 634 aa14.01□□□□□ -0.17
CMTM1-208ENST00000479381 MROH2AA6NES4 1674 aa13.99□□□□□ -0.17
CMTM1-208ENST00000479381 PPARGC1BQ86YN6 1023 aaKnown RBP13.99□□□□□ -0.17
CMTM1-208ENST00000479381 FGD6Q6ZV73 1430 aa13.98□□□□□ -0.17
CMTM1-208ENST00000479381 ZMYM3Q14202 1370 aa13.98□□□□□ -0.17
CMTM1-208ENST00000479381 WASHC2CQ9Y4E1 1318 aa13.98□□□□□ -0.17
CMTM1-208ENST00000479381 SETD1BQ9UPS6 1966 aaKnown RBP13.98□□□□□ -0.17
CMTM1-208ENST00000479381 CHIC2Q9UKJ5 165 aa13.97□□□□□ -0.17
CMTM1-208ENST00000479381 MAST1Q9Y2H9 1570 aa13.96□□□□□ -0.17
CMTM1-208ENST00000479381 CROCC2H7BZ55 1655 aa13.96□□□□□ -0.17
CMTM1-208ENST00000479381 RRP7BPQ9NSQ0 103 aa13.96□□□□□ -0.17
CMTM1-208ENST00000479381 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
CMTM1-208ENST00000479381 KDM5DQ9BY66 1539 aa13.95□□□□□ -0.18
CMTM1-208ENST00000479381 DAPK1P53355 1430 aa13.94□□□□□ -0.18
CMTM1-208ENST00000479381 KIF15Q9NS87 1388 aa13.94□□□□□ -0.18
CMTM1-208ENST00000479381 DNMT1P26358 1616 aaKnown RBP13.93□□□□□ -0.18
CMTM1-208ENST00000479381 DUOX2Q9NRD8 1548 aa13.92□□□□□ -0.18
CMTM1-208ENST00000479381 ITGAEP38570 1179 aa13.92□□□□□ -0.18
CMTM1-208ENST00000479381 ANKRD30AQ9BXX3 1397 aa13.92□□□□□ -0.18
CMTM1-208ENST00000479381 SHANK2Q9UPX8 1470 aa13.92□□□□□ -0.18
CMTM1-208ENST00000479381 ABCC5O15440 1437 aa13.91□□□□□ -0.18
CMTM1-208ENST00000479381 NPATQ14207 1427 aa13.91□□□□□ -0.18
CMTM1-208ENST00000479381 TCOF1Q13428 1488 aaKnown RBP13.91□□□□□ -0.18
CMTM1-208ENST00000479381 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.18
CMTM1-208ENST00000479381 EIF2AK4Q9P2K8 1649 aaKnown RBP13.9□□□□□ -0.18
CMTM1-208ENST00000479381 KANK1Q14678 1352 aa13.89□□□□□ -0.19
CMTM1-208ENST00000479381 TNRQ92752 1358 aa13.88□□□□□ -0.19
CMTM1-208ENST00000479381 CEP152O94986 1710 aa13.88□□□□□ -0.19
CMTM1-208ENST00000479381 FAM135AQ9P2D6 1515 aa13.88□□□□□ -0.19
CMTM1-208ENST00000479381 PTPRKQ15262 1439 aa13.88□□□□□ -0.19
CMTM1-208ENST00000479381 ZC3H13Q5T200 1668 aaKnown RBP13.88□□□□□ -0.19
CMTM1-208ENST00000479381 CAMSAP1Q5T5Y3 1602 aa13.87□□□□□ -0.19
CMTM1-208ENST00000479381 ERBINQ96RT1 1412 aa13.87□□□□□ -0.19
CMTM1-208ENST00000479381 CEP170BQ9Y4F5 1589 aaPredicted RBP13.87□□□□□ -0.19
CMTM1-208ENST00000479381 RNF17Q9BXT8 1623 aaKnown RBP13.86□□□□□ -0.19
CMTM1-208ENST00000479381 CFAP65Q6ZU64 1925 aaKnown RBP13.86□□□□□ -0.19
CMTM1-208ENST00000479381 FBXO31Q5XUX0 539 aaPredicted RBP13.86□□□□□ -0.19
CMTM1-208ENST00000479381 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
CMTM1-208ENST00000479381 PZPP20742 1482 aa13.86□□□□□ -0.19
CMTM1-208ENST00000479381 ZNF142P52746 1687 aaPredicted RBP13.84□□□□□ -0.19
CMTM1-208ENST00000479381 ABCC3O15438 1527 aa13.84□□□□□ -0.19
CMTM1-208ENST00000479381 NCKAP5LQ9HCH0 1330 aa13.83□□□□□ -0.2
CMTM1-208ENST00000479381 STRCQ7RTU9 1775 aa13.83□□□□□ -0.2
CMTM1-208ENST00000479381 A2ML1A8K2U0 1454 aa13.82□□□□□ -0.2
CMTM1-208ENST00000479381 STAG3Q9UJ98 1225 aa13.82□□□□□ -0.2
CMTM1-208ENST00000479381 NCOA1Q15788 1441 aa13.81□□□□□ -0.2
CMTM1-208ENST00000479381 DSG3P32926 999 aa13.8□□□□□ -0.2
CMTM1-208ENST00000479381 PRDM15P57071 1507 aaPredicted RBP13.8□□□□□ -0.2
CMTM1-208ENST00000479381 PKD2Q13563 968 aa13.79□□□□□ -0.2
CMTM1-208ENST00000479381 ANKRD50Q9ULJ7 1429 aa13.79□□□□□ -0.2
CMTM1-208ENST00000479381 MROH1Q8NDA8 1641 aa13.79□□□□□ -0.2
CMTM1-208ENST00000479381 THEMISQ8N1K5 641 aaPredicted RBP13.78□□□□□ -0.2
CMTM1-208ENST00000479381 CERKQ8TCT0 537 aa13.78□□□□□ -0.2
CMTM1-208ENST00000479381 FBXO41Q8TF61 875 aa13.78□□□□□ -0.2
CMTM1-208ENST00000479381 PTPRTO14522 1441 aa13.78□□□□□ -0.2
CMTM1-208ENST00000479381 ADGRL2O95490 1459 aa13.78□□□□□ -0.2
CMTM1-208ENST00000479381 ERVK-7P63135 1459 aa13.78□□□□□ -0.2
CMTM1-208ENST00000479381 NLRP1Q9C000 1473 aa13.78□□□□□ -0.2
CMTM1-208ENST00000479381 UGGT1Q9NYU2 1555 aa13.78□□□□□ -0.2
CMTM1-208ENST00000479381 ABCB7O75027 752 aa13.77□□□□□ -0.21
CMTM1-208ENST00000479381 PLA2R1Q13018 1463 aa13.77□□□□□ -0.21
CMTM1-208ENST00000479381 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.76□□□□□ -0.21
CMTM1-208ENST00000479381 ANKLE2Q86XL3 938 aa13.76□□□□□ -0.21
CMTM1-208ENST00000479381 POLR1AO95602 1720 aaPredicted RBP13.76□□□□□ -0.21
CMTM1-208ENST00000479381 DEPDC5O75140 1603 aa13.75□□□□□ -0.21
CMTM1-208ENST00000479381 SPATA31D1Q6ZQQ2 1576 aa13.75□□□□□ -0.21
CMTM1-208ENST00000479381 ATXN8OSP0DMR3 200 aa13.74□□□□□ -0.21
CMTM1-208ENST00000479381 CHGAP10645 457 aaKnown RBP13.71□□□□□ -0.21
CMTM1-208ENST00000479381 BCANQ96GW7 911 aa13.71□□□□□ -0.21
CMTM1-208ENST00000479381 ROCK1Q13464 1354 aa13.71□□□□□ -0.22
CMTM1-208ENST00000479381 ZNF335Q9H4Z2 1342 aaPredicted RBP13.7□□□□□ -0.22
CMTM1-208ENST00000479381 EID1Q9Y6B2 187 aa13.7□□□□□ -0.22
CMTM1-208ENST00000479381 ARHGAP31Q2M1Z3 1444 aa13.7□□□□□ -0.22
CMTM1-208ENST00000479381 EFCAB6Q5THR3 1501 aa13.69□□□□□ -0.22
CMTM1-208ENST00000479381 NPHP4O75161 1426 aaPredicted RBP13.68□□□□□ -0.22
CMTM1-208ENST00000479381 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
CMTM1-208ENST00000479381 LMTK2Q8IWU2 1503 aa13.68□□□□□ -0.22
CMTM1-208ENST00000479381 NUP155O75694 1391 aa13.68□□□□□ -0.22
CMTM1-208ENST00000479381 PIK3C2BO00750 1634 aa13.68□□□□□ -0.22
CMTM1-208ENST00000479381 UBR1Q8IWV7 1749 aa13.67□□□□□ -0.22
CMTM1-208ENST00000479381 UNC13BO14795 1591 aa13.67□□□□□ -0.22
CMTM1-208ENST00000479381 TET3O43151 1660 aa13.67□□□□□ -0.22
CMTM1-208ENST00000479381 IQGAP1P46940 1657 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms