RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 SETD1AO15047 1707 aaKnown RBP16.22■□□□□ 0.19
CDK11A-216ENST00000479362 PREX2Q70Z35 1606 aa16.2■□□□□ 0.18
CDK11A-216ENST00000479362 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
CDK11A-216ENST00000479362 A2ML1A8K2U0 1454 aa16.2■□□□□ 0.18
CDK11A-216ENST00000479362 EHBP1L1Q8N3D4 1523 aa16.19■□□□□ 0.18
CDK11A-216ENST00000479362 TROQ12816 1431 aaPredicted RBP16.18■□□□□ 0.18
CDK11A-216ENST00000479362 STRCP1A6NGW2 1772 aa16.18■□□□□ 0.18
CDK11A-216ENST00000479362 RNF17Q9BXT8 1623 aaKnown RBP16.17■□□□□ 0.18
CDK11A-216ENST00000479362 PLXNC1O60486 1568 aa16.17■□□□□ 0.18
CDK11A-216ENST00000479362 SAMD9LQ8IVG5 1584 aa16.17■□□□□ 0.18
CDK11A-216ENST00000479362 POTEAQ6S8J7 498 aa16.16■□□□□ 0.18
CDK11A-216ENST00000479362 LRRC9Q6ZRR7 1453 aa16.16■□□□□ 0.18
CDK11A-216ENST00000479362 MTUS2Q5JR59 1369 aa16.14■□□□□ 0.17
CDK11A-216ENST00000479362 CDK11AQ9UQ88 783 aaPredicted RBP16.13■□□□□ 0.17
CDK11A-216ENST00000479362 LRRC7Q96NW7 1537 aa16.12■□□□□ 0.17
CDK11A-216ENST00000479362 SYNMO15061 1565 aa16.11■□□□□ 0.17
CDK11A-216ENST00000479362 CDC42BPAQ5VT25 1732 aa16.11■□□□□ 0.17
CDK11A-216ENST00000479362 KANK4Q5T7N3 995 aaPredicted RBP16.1■□□□□ 0.17
CDK11A-216ENST00000479362 DEPDC5O75140 1603 aa16.09■□□□□ 0.17
CDK11A-216ENST00000479362 MED14O60244 1454 aa16.09■□□□□ 0.17
CDK11A-216ENST00000479362 INO80Q9ULG1 1556 aaPredicted RBP16.09■□□□□ 0.17
CDK11A-216ENST00000479362 IQGAP1P46940 1657 aa16.08■□□□□ 0.17
CDK11A-216ENST00000479362 RNF216Q9NWF9 866 aaPredicted RBP16.08■□□□□ 0.16
CDK11A-216ENST00000479362 ATP7AQ04656 1500 aa16.08■□□□□ 0.16
CDK11A-216ENST00000479362 PPARGC1BQ86YN6 1023 aaKnown RBP16.07■□□□□ 0.16
CDK11A-216ENST00000479362 SYCP2Q9BX26 1530 aa16.06■□□□□ 0.16
CDK11A-216ENST00000479362 NPHP4O75161 1426 aaPredicted RBP16.06■□□□□ 0.16
CDK11A-216ENST00000479362 A2MP01023 1474 aa16.05■□□□□ 0.16
CDK11A-216ENST00000479362 NCOA2Q15596 1464 aa16.04■□□□□ 0.16
CDK11A-216ENST00000479362 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDK11A-216ENST00000479362 XIRP1Q702N8 1843 aaKnown RBP16.04■□□□□ 0.16
CDK11A-216ENST00000479362 TNRQ92752 1358 aa16.02■□□□□ 0.16
CDK11A-216ENST00000479362 SPAG9O60271 1321 aaKnown RBP16.02■□□□□ 0.16
CDK11A-216ENST00000479362 GGT6Q6P531 493 aa16.02■□□□□ 0.16
CDK11A-216ENST00000479362 ANKLE2Q86XL3 938 aa16.02■□□□□ 0.16
CDK11A-216ENST00000479362 HOXD11P31277 338 aaPredicted RBP16.01■□□□□ 0.15
CDK11A-216ENST00000479362 ADGBQ8N7X0 1667 aa16.01■□□□□ 0.15
CDK11A-216ENST00000479362 ZC3H13Q5T200 1668 aaKnown RBP15.99■□□□□ 0.15
CDK11A-216ENST00000479362 PZPP20742 1482 aa15.98■□□□□ 0.15
CDK11A-216ENST00000479362 FBXO31Q5XUX0 539 aaPredicted RBP15.98■□□□□ 0.15
CDK11A-216ENST00000479362 UPF1Q92900 1129 aaKnown RBP eCLIP15.98■□□□□ 0.15
CDK11A-216ENST00000479362 UGGT1Q9NYU2 1555 aa15.98■□□□□ 0.15
CDK11A-216ENST00000479362 CCNB3Q8WWL7 1395 aa15.97■□□□□ 0.15
CDK11A-216ENST00000479362 MYOM3Q5VTT5 1437 aa15.96■□□□□ 0.15
CDK11A-216ENST00000479362 POTEDQ86YR6 584 aa15.96■□□□□ 0.15
CDK11A-216ENST00000479362 NLRP1Q9C000 1473 aa15.95■□□□□ 0.14
CDK11A-216ENST00000479362 FAM135BQ49AJ0 1406 aa15.94■□□□□ 0.14
CDK11A-216ENST00000479362 FAM135AQ9P2D6 1515 aa15.94■□□□□ 0.14
CDK11A-216ENST00000479362 HNRNPMP52272 730 aaKnown RBP eCLIP15.94■□□□□ 0.14
CDK11A-216ENST00000479362 THEMISQ8N1K5 641 aaPredicted RBP15.94■□□□□ 0.14
CDK11A-216ENST00000479362 ROBO1Q9Y6N7 1651 aa15.93■□□□□ 0.14
CDK11A-216ENST00000479362 KDM5DQ9BY66 1539 aa15.93■□□□□ 0.14
CDK11A-216ENST00000479362 GPATCH8Q9UKJ3 1502 aaKnown RBP15.93■□□□□ 0.14
CDK11A-216ENST00000479362 ZNF777Q9ULD5 760 aaPredicted RBP15.92■□□□□ 0.14
CDK11A-216ENST00000479362 MIA2Q96PC5 1412 aa15.92■□□□□ 0.14
CDK11A-216ENST00000479362 KIAA1107Q9UPP5 1409 aa15.92■□□□□ 0.14
CDK11A-216ENST00000479362 FGD6Q6ZV73 1430 aa15.91■□□□□ 0.14
CDK11A-216ENST00000479362 PTPN23Q9H3S7 1636 aa15.9■□□□□ 0.14
CDK11A-216ENST00000479362 RRBP1Q9P2E9 1410 aaKnown RBP15.88■□□□□ 0.13
CDK11A-216ENST00000479362 PLEKHH2Q8IVE3 1493 aa15.87■□□□□ 0.13
CDK11A-216ENST00000479362 CAMSAP2Q08AD1 1489 aa15.86■□□□□ 0.13
CDK11A-216ENST00000479362 CFDP1Q9UEE9 299 aaPredicted RBP15.85■□□□□ 0.13
CDK11A-216ENST00000479362 PHLPP1O60346 1717 aa15.84■□□□□ 0.13
CDK11A-216ENST00000479362 UBR1Q8IWV7 1749 aa15.84■□□□□ 0.13
CDK11A-216ENST00000479362 DHX29Q7Z478 1369 aaKnown RBP15.83■□□□□ 0.12
CDK11A-216ENST00000479362 SCAF11Q99590 1463 aaKnown RBP15.82■□□□□ 0.12
CDK11A-216ENST00000479362 LRP6O75581 1613 aa15.82■□□□□ 0.12
CDK11A-216ENST00000479362 TRIM52Q96A61 297 aa15.81■□□□□ 0.12
CDK11A-216ENST00000479362 MBD5Q9P267 1494 aa15.79■□□□□ 0.12
CDK11A-216ENST00000479362 RTEL1-TNFRSF6BF6WH68 1400 aa15.79■□□□□ 0.12
CDK11A-216ENST00000479362 JCADQ9P266 1359 aa15.79■□□□□ 0.12
CDK11A-216ENST00000479362 WASHC2CQ9Y4E1 1318 aa15.79■□□□□ 0.12
CDK11A-216ENST00000479362 FAM50AQ14320 339 aaKnown RBP15.79■□□□□ 0.12
CDK11A-216ENST00000479362 CROCC2H7BZ55 1655 aa15.79■□□□□ 0.12
CDK11A-216ENST00000479362 COL16A1Q07092 1604 aaPredicted RBP15.79■□□□□ 0.12
CDK11A-216ENST00000479362 KIF3BO15066 747 aa15.78■□□□□ 0.12
CDK11A-216ENST00000479362 ARHGAP23Q9P227 1491 aa15.78■□□□□ 0.12
CDK11A-216ENST00000479362 TMEM94Q12767 1356 aa15.77■□□□□ 0.12
CDK11A-216ENST00000479362 ZNF644Q9H582 1327 aaPredicted RBP15.77■□□□□ 0.12
CDK11A-216ENST00000479362 SLC4A1APQ9BWU0 796 aaKnown RBP15.77■□□□□ 0.12
CDK11A-216ENST00000479362 ARHGEF5Q12774 1597 aa15.77■□□□□ 0.11
CDK11A-216ENST00000479362 SLIT1O75093 1534 aa15.77■□□□□ 0.11
CDK11A-216ENST00000479362 LTKP29376 864 aa15.76■□□□□ 0.11
CDK11A-216ENST00000479362 TRIM26Q12899 539 aaPredicted RBP15.76■□□□□ 0.11
CDK11A-216ENST00000479362 ERVK-7P63135 1459 aa15.76■□□□□ 0.11
CDK11A-216ENST00000479362 CDK12Q9NYV4 1490 aaPredicted RBP15.75■□□□□ 0.11
CDK11A-216ENST00000479362 ZNF772Q68DY9 489 aaPredicted RBP15.74■□□□□ 0.11
CDK11A-216ENST00000479362 ABCC3O15438 1527 aa15.73■□□□□ 0.11
CDK11A-216ENST00000479362 CCDC141Q6ZP82 1450 aa15.73■□□□□ 0.11
CDK11A-216ENST00000479362 DAPK1P53355 1430 aa15.73■□□□□ 0.11
CDK11A-216ENST00000479362 CFAP65Q6ZU64 1925 aaKnown RBP15.72■□□□□ 0.11
CDK11A-216ENST00000479362 SHPRHQ149N8 1683 aa15.7■□□□□ 0.1
CDK11A-216ENST00000479362 EP400Q96L91 3159 aa15.7■□□□□ 0.1
CDK11A-216ENST00000479362 ABCC5O15440 1437 aa15.69■□□□□ 0.1
CDK11A-216ENST00000479362 PRDM15P57071 1507 aaPredicted RBP15.69■□□□□ 0.1
CDK11A-216ENST00000479362 RXRBP28702 533 aa15.69■□□□□ 0.1
CDK11A-216ENST00000479362 TXNDC2Q86VQ3 553 aa15.69■□□□□ 0.1
CDK11A-216ENST00000479362 RBM33Q96EV2 1170 aaKnown RBP15.69■□□□□ 0.1
CDK11A-216ENST00000479362 MAST1Q9Y2H9 1570 aa15.69■□□□□ 0.1
CDK11A-216ENST00000479362 SPATA31A6Q5VVP1 1343 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms