RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 TRIM26Q12899 539 aaPredicted RBP10.05□□□□□ -0.8
RC3H1-204ENST00000479099 FOSBP53539 338 aa10.04□□□□□ -0.8
RC3H1-204ENST00000479099 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
RC3H1-204ENST00000479099 JPH4Q96JJ6 628 aa10.03□□□□□ -0.8
RC3H1-204ENST00000479099 KCNK17Q96T54 332 aa10.03□□□□□ -0.8
RC3H1-204ENST00000479099 BCL2L12Q9HB09 334 aa10.03□□□□□ -0.8
RC3H1-204ENST00000479099 HRO43593 1189 aa10.01□□□□□ -0.81
RC3H1-204ENST00000479099 CAMK2BQ13554 666 aa10□□□□□ -0.81
RC3H1-204ENST00000479099 UBTFP17480 764 aaKnown RBP9.99□□□□□ -0.81
RC3H1-204ENST00000479099 PTPREP23469 700 aa9.98□□□□□ -0.81
RC3H1-204ENST00000479099 ZDHHC16Q969W1 377 aa9.98□□□□□ -0.81
RC3H1-204ENST00000479099 SLC4A5Q9BY07 1137 aa9.97□□□□□ -0.81
RC3H1-204ENST00000479099 VPS9D1Q9Y2B5 631 aa9.96□□□□□ -0.82
RC3H1-204ENST00000479099 STAC3Q96MF2 364 aa9.95□□□□□ -0.82
RC3H1-204ENST00000479099 HRCP23327 699 aa9.94□□□□□ -0.82
RC3H1-204ENST00000479099 ADAM33Q9BZ11 813 aa9.94□□□□□ -0.82
RC3H1-204ENST00000479099 HCSTQ9UBK5 93 aa9.93□□□□□ -0.82
RC3H1-204ENST00000479099 PCDHGA10Q9Y5H3 936 aa9.93□□□□□ -0.82
RC3H1-204ENST00000479099 ZBED2Q9BTP6 218 aa9.92□□□□□ -0.82
RC3H1-204ENST00000479099 DPYSL4O14531 572 aa9.91□□□□□ -0.82
RC3H1-204ENST00000479099 PHF14O94880 888 aa9.91□□□□□ -0.82
RC3H1-204ENST00000479099 FBXW7Q969H0 707 aa9.91□□□□□ -0.82
RC3H1-204ENST00000479099 TYW1BQ6NUM6 668 aa9.9□□□□□ -0.82
RC3H1-204ENST00000479099 KCTD12Q96CX2 325 aaKnown RBP9.88□□□□□ -0.83
RC3H1-204ENST00000479099 PPP1R3GB7ZBB8 358 aa9.87□□□□□ -0.83
RC3H1-204ENST00000479099 BHMG1C9JSJ3 638 aaPredicted RBP9.87□□□□□ -0.83
RC3H1-204ENST00000479099 EPAS1Q99814 870 aa9.87□□□□□ -0.83
RC3H1-204ENST00000479099 PDIA6Q15084 440 aa9.83□□□□□ -0.84
RC3H1-204ENST00000479099 E2F4Q16254 413 aa9.83□□□□□ -0.84
RC3H1-204ENST00000479099 MRPL50Q8N5N7 158 aaKnown RBP9.83□□□□□ -0.84
RC3H1-204ENST00000479099 NBPF3Q9H094 633 aa9.83□□□□□ -0.84
RC3H1-204ENST00000479099 WDR70Q9NW82 654 aa9.83□□□□□ -0.84
RC3H1-204ENST00000479099 SPDYE16A6NNV3 312 aaPredicted RBP9.82□□□□□ -0.84
RC3H1-204ENST00000479099 COL9A1P20849 921 aa9.82□□□□□ -0.84
RC3H1-204ENST00000479099 GOLGA8CPA6NN73 597 aa9.81□□□□□ -0.84
RC3H1-204ENST00000479099 DDX12PQ92771 950 aa9.81□□□□□ -0.84
RC3H1-204ENST00000479099 PLA2G2EQ9NZK7 142 aa9.81□□□□□ -0.84
RC3H1-204ENST00000479099 RABGEF1Q9UJ41 708 aa9.81□□□□□ -0.84
RC3H1-204ENST00000479099 C6orf132Q5T0Z8 1188 aa9.8□□□□□ -0.84
RC3H1-204ENST00000479099 ARIH1Q9Y4X5 557 aaPredicted RBP9.8□□□□□ -0.84
RC3H1-204ENST00000479099 PROX2Q3B8N5 592 aa9.79□□□□□ -0.84
RC3H1-204ENST00000479099 BRPF1P55201 1214 aaPredicted RBP9.78□□□□□ -0.84
RC3H1-204ENST00000479099 THSD4Q6ZMP0 1018 aa9.78□□□□□ -0.84
RC3H1-204ENST00000479099 WNT2BQ93097 391 aa9.78□□□□□ -0.84
RC3H1-204ENST00000479099 ONECUT3O60422 494 aaPredicted RBP9.77□□□□□ -0.85
RC3H1-204ENST00000479099 PTPN5P54829 565 aa9.77□□□□□ -0.85
RC3H1-204ENST00000479099 RBM33Q96EV2 1170 aaKnown RBP9.77□□□□□ -0.85
RC3H1-204ENST00000479099 EN1Q05925 392 aaPredicted RBP9.76□□□□□ -0.85
RC3H1-204ENST00000479099 LAPTM4BQ86VI4 370 aa9.74□□□□□ -0.85
RC3H1-204ENST00000479099 MAP3K7O43318 606 aa9.73□□□□□ -0.85
RC3H1-204ENST00000479099 KIAA1468Q9P260 1216 aa9.73□□□□□ -0.85
RC3H1-204ENST00000479099 TRIM6-TRIM34B2RNG4 842 aa9.72□□□□□ -0.85
RC3H1-204ENST00000479099 ANKK1Q8NFD2 765 aa9.71□□□□□ -0.86
RC3H1-204ENST00000479099 CCDC9Q9Y3X0 531 aaKnown RBP9.71□□□□□ -0.86
RC3H1-204ENST00000479099 TSR1Q2NL82 804 aaKnown RBP9.7□□□□□ -0.86
RC3H1-204ENST00000479099 GRXCR2A6NFK2 248 aa9.68□□□□□ -0.86
RC3H1-204ENST00000479099 ZFRQ96KR1 1074 aaKnown RBP9.67□□□□□ -0.86
RC3H1-204ENST00000479099 SEPT9Q9UHD8 586 aaPredicted RBP9.67□□□□□ -0.86
RC3H1-204ENST00000479099 SOWAHBA6NEL2 793 aa9.66□□□□□ -0.86
RC3H1-204ENST00000479099 FAM98CQ17RN3 349 aaKnown RBP9.66□□□□□ -0.86
RC3H1-204ENST00000479099 CERKQ8TCT0 537 aa9.66□□□□□ -0.86
RC3H1-204ENST00000479099 PRIM1P49642 420 aaKnown RBP9.65□□□□□ -0.86
RC3H1-204ENST00000479099 IFFO2Q5TF58 517 aa9.65□□□□□ -0.86
RC3H1-204ENST00000479099 PACS2Q86VP3 889 aa9.65□□□□□ -0.86
RC3H1-204ENST00000479099 ZMYND15Q9H091 742 aa9.65□□□□□ -0.86
RC3H1-204ENST00000479099 TSKSQ9UJT2 592 aa9.65□□□□□ -0.86
RC3H1-204ENST00000479099 OSBPP22059 807 aa9.64□□□□□ -0.87
RC3H1-204ENST00000479099 BCAMP50895 628 aa9.64□□□□□ -0.87
RC3H1-204ENST00000479099 RSPH6AQ9H0K4 717 aa9.64□□□□□ -0.87
RC3H1-204ENST00000479099 CDCA7LQ96GN5 454 aa9.63□□□□□ -0.87
RC3H1-204ENST00000479099 PRSS12P56730 875 aa9.62□□□□□ -0.87
RC3H1-204ENST00000479099 NYAP1Q6ZVC0 841 aa9.62□□□□□ -0.87
RC3H1-204ENST00000479099 ARHGEF1Q92888 912 aaKnown RBP9.62□□□□□ -0.87
RC3H1-204ENST00000479099 LOC105371045A0A1W2PR82 267 aa9.61□□□□□ -0.87
RC3H1-204ENST00000479099 ZBTB7CA1YPR0 619 aa9.61□□□□□ -0.87
RC3H1-204ENST00000479099 NEUROD2Q15784 382 aa9.59□□□□□ -0.87
RC3H1-204ENST00000479099 LMOD2Q6P5Q4 547 aa9.59□□□□□ -0.87
RC3H1-204ENST00000479099 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.59□□□□□ -0.87
RC3H1-204ENST00000479099 KCNV2Q8TDN2 545 aa9.59□□□□□ -0.87
RC3H1-204ENST00000479099 LRCH3Q96II8 777 aa9.59□□□□□ -0.87
RC3H1-204ENST00000479099 CDHR5Q9HBB8 845 aa9.59□□□□□ -0.87
RC3H1-204ENST00000479099 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.59□□□□□ -0.87
RC3H1-204ENST00000479099 EIF5BO60841 1220 aaKnown RBP9.58□□□□□ -0.88
RC3H1-204ENST00000479099 RBM27Q9P2N5 1060 aaKnown RBP9.58□□□□□ -0.88
RC3H1-204ENST00000479099 FAM198AQ9UFP1 575 aa9.58□□□□□ -0.88
RC3H1-204ENST00000479099 NBPF26B4DH59 902 aa9.57□□□□□ -0.88
RC3H1-204ENST00000479099 WBP1LQ9NX94 342 aa9.57□□□□□ -0.88
RC3H1-204ENST00000479099 TSR3Q9UJK0 312 aaKnown RBP9.57□□□□□ -0.88
RC3H1-204ENST00000479099 ITGBL1O95965 494 aaPredicted RBP9.56□□□□□ -0.88
RC3H1-204ENST00000479099 A0A0G2JS52 829 aa9.55□□□□□ -0.88
RC3H1-204ENST00000479099 TATDN2Q93075 761 aa9.55□□□□□ -0.88
RC3H1-204ENST00000479099 PNMA3Q9UL41 463 aa9.55□□□□□ -0.88
RC3H1-204ENST00000479099 HPS5Q9UPZ3 1129 aa9.55□□□□□ -0.88
RC3H1-204ENST00000479099 SMAPO00193 183 aa9.54□□□□□ -0.88
RC3H1-204ENST00000479099 RGS20O76081 388 aa9.54□□□□□ -0.88
RC3H1-204ENST00000479099 P3H3Q8IVL6 736 aa9.54□□□□□ -0.88
RC3H1-204ENST00000479099 MLLT3P42568 568 aaPredicted RBP9.53□□□□□ -0.88
RC3H1-204ENST00000479099 NPDC1Q9NQX5 325 aaPredicted RBP9.53□□□□□ -0.88
RC3H1-204ENST00000479099 C3orf80F5H4A9 247 aa9.52□□□□□ -0.89
RC3H1-204ENST00000479099 ARID3AQ99856 593 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms