RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 MYT1LQ9UL68 1186 aa38.78■■■■□ 3.8
CHKB-208ENST00000479003 PPRC1Q5VV67 1664 aaKnown RBP38.78■■■■□ 3.8
CHKB-208ENST00000479003 KIF13AQ9H1H9 1805 aa38.77■■■■□ 3.8
CHKB-208ENST00000479003 ANKRD30BQ9BXX2 1392 aa38.76■■■■□ 3.79
CHKB-208ENST00000479003 RAPGEF3O95398 923 aa38.73■■■■□ 3.79
CHKB-208ENST00000479003 FAM135AQ9P2D6 1515 aa38.73■■■■□ 3.79
CHKB-208ENST00000479003 PKD2Q13563 968 aa38.72■■■■□ 3.79
CHKB-208ENST00000479003 HECW2Q9P2P5 1572 aa38.71■■■■□ 3.79
CHKB-208ENST00000479003 CCER2I3L3R5 266 aa38.71■■■■□ 3.79
CHKB-208ENST00000479003 MAGI2Q86UL8 1455 aa38.69■■■■□ 3.78
CHKB-208ENST00000479003 MLH3Q9UHC1 1453 aa38.69■■■■□ 3.78
CHKB-208ENST00000479003 RICTORQ6R327 1708 aa38.68■■■■□ 3.78
CHKB-208ENST00000479003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.68■■■■□ 3.789e-8■■■□□ 18
CHKB-208ENST00000479003 ANP32CO43423 234 aa38.66■■■■□ 3.78
CHKB-208ENST00000479003 IQGAP3Q86VI3 1631 aa38.64■■■■□ 3.78
CHKB-208ENST00000479003 DHX29Q7Z478 1369 aaKnown RBP38.63■■■■□ 3.78
CHKB-208ENST00000479003 TEX14Q8IWB6 1497 aa38.63■■■■□ 3.77
CHKB-208ENST00000479003 SUPT16HQ9Y5B9 1047 aaKnown RBP38.62■■■■□ 3.77
CHKB-208ENST00000479003 FRMPD1Q5SYB0 1578 aa38.6■■■■□ 3.77
CHKB-208ENST00000479003 ABCA6Q8N139 1617 aa38.59■■■■□ 3.77
CHKB-208ENST00000479003 DEPDC5O75140 1603 aa38.58■■■■□ 3.77
CHKB-208ENST00000479003 RPRD2Q5VT52 1461 aaKnown RBP38.58■■■■□ 3.77
CHKB-208ENST00000479003 EIF2AK4Q9P2K8 1649 aaKnown RBP38.57■■■■□ 3.77
CHKB-208ENST00000479003 A2MP01023 1474 aa38.56■■■■□ 3.76
CHKB-208ENST00000479003 KIF3BO15066 747 aa38.53■■■■□ 3.76
CHKB-208ENST00000479003 L3MBTL2Q969R5 705 aa38.5■■■■□ 3.75
CHKB-208ENST00000479003 DIP2CQ9Y2E4 1556 aa38.49■■■■□ 3.75
CHKB-208ENST00000479003 HSPA5P11021 654 aaKnown RBP38.48■■■■□ 3.75
CHKB-208ENST00000479003 MROH1Q8NDA8 1641 aa38.48■■■■□ 3.75
CHKB-208ENST00000479003 YEATS2Q9ULM3 1422 aa38.45■■■■□ 3.75
CHKB-208ENST00000479003 PRDM15P57071 1507 aaPredicted RBP38.45■■■■□ 3.75
CHKB-208ENST00000479003 ZMYM4Q5VZL5 1548 aa38.45■■■■□ 3.75
CHKB-208ENST00000479003 VWDEQ8N2E2 1590 aa38.43■■■■□ 3.74
CHKB-208ENST00000479003 EIF4G2P78344 907 aaKnown RBP eCLIP38.42■■■■□ 3.74
CHKB-208ENST00000479003 DNAJC5Q9H3Z4 198 aa38.42■■■■□ 3.74
CHKB-208ENST00000479003 WASHC2AQ641Q2 1341 aa38.39■■■■□ 3.74
CHKB-208ENST00000479003 RNF17Q9BXT8 1623 aaKnown RBP38.39■■■■□ 3.74
CHKB-208ENST00000479003 COL17A1Q9UMD9 1497 aaPredicted RBP38.38■■■■□ 3.73
CHKB-208ENST00000479003 PLA2R1Q13018 1463 aa38.36■■■■□ 3.73
CHKB-208ENST00000479003 KANK1Q14678 1352 aa38.36■■■■□ 3.73
CHKB-208ENST00000479003 E9PCH4 1651 aa38.35■■■■□ 3.73
CHKB-208ENST00000479003 BCORL1Q5H9F3 1711 aa38.35■■■■□ 3.73
CHKB-208ENST00000479003 TET3O43151 1660 aa38.33■■■■□ 3.73
CHKB-208ENST00000479003 CCDC144AA2RUR9 1427 aa38.27■■■■□ 3.72
CHKB-208ENST00000479003 NBPF8Q3BBV2 869 aa38.26■■■■□ 3.72
CHKB-208ENST00000479003 ATP10AO60312 1499 aa38.26■■■■□ 3.72
CHKB-208ENST00000479003 GGT6Q6P531 493 aa38.25■■■■□ 3.71
CHKB-208ENST00000479003 CEP152O94986 1710 aa38.24■■■■□ 3.71
CHKB-208ENST00000479003 CNTLNQ9NXG0 1405 aa38.23■■■■□ 3.71
CHKB-208ENST00000479003 POLR1AO95602 1720 aaPredicted RBP38.22■■■■□ 3.71
CHKB-208ENST00000479003 LMTK2Q8IWU2 1503 aa38.2■■■■□ 3.71
CHKB-208ENST00000479003 EFCAB6Q5THR3 1501 aa38.2■■■■□ 3.71
CHKB-208ENST00000479003 CCDC7Q96M83 1385 aa38.18■■■■□ 3.7
CHKB-208ENST00000479003 SPATA31E1Q6ZUB1 1445 aa38.17■■■■□ 3.7
CHKB-208ENST00000479003 TRHP20396 242 aaPredicted RBP38.17■■■■□ 3.7
CHKB-208ENST00000479003 SPHKAPQ2M3C7 1700 aa38.17■■■■□ 3.7
CHKB-208ENST00000479003 PTPRTO14522 1441 aa38.14■■■■□ 3.7
CHKB-208ENST00000479003 TRPM2O94759 1503 aa38.14■■■■□ 3.7
CHKB-208ENST00000479003 ABCC3O15438 1527 aa38.12■■■■□ 3.69
CHKB-208ENST00000479003 C11orf95C9JLR9 678 aaPredicted RBP38.12■■■■□ 3.69
CHKB-208ENST00000479003 ARHGEF40Q8TER5 1519 aa38.11■■■■□ 3.69
CHKB-208ENST00000479003 REREQ9P2R6 1566 aa38.11■■■■□ 3.69
CHKB-208ENST00000479003 WASHC2CQ9Y4E1 1318 aa38.09■■■■□ 3.69
CHKB-208ENST00000479003 SIGLEC1Q9BZZ2 1709 aa38.08■■■■□ 3.69
CHKB-208ENST00000479003 CLTCL1P53675 1640 aa38.05■■■■□ 3.68
CHKB-208ENST00000479003 FKBP8Q14318 412 aa38.05■■■■□ 3.68
CHKB-208ENST00000479003 NPATQ14207 1427 aa38.04■■■■□ 3.68
CHKB-208ENST00000479003 CAMSAP1Q5T5Y3 1602 aa38.03■■■■□ 3.68
CHKB-208ENST00000479003 AGLP35573 1532 aa38.01■■■■□ 3.68
CHKB-208ENST00000479003 RGL3Q3MIN7 710 aa38.01■■■■□ 3.68
CHKB-208ENST00000479003 ZC3H13Q5T200 1668 aaKnown RBP37.99■■■■□ 3.67
CHKB-208ENST00000479003 DCAF11Q8TEB1 546 aa37.99■■■■□ 3.67
CHKB-208ENST00000479003 ZNF326Q5BKZ1 582 aaKnown RBP37.99■■■■□ 3.67
CHKB-208ENST00000479003 UGGT1Q9NYU2 1555 aa37.98■■■■□ 3.67
CHKB-208ENST00000479003 KIF7Q2M1P5 1343 aa37.97■■■■□ 3.67
CHKB-208ENST00000479003 KDM2AQ9Y2K7 1162 aa37.97■■■■□ 3.67
CHKB-208ENST00000479003 UHRF1BP1Q6BDS2 1440 aa37.96■■■■□ 3.67
CHKB-208ENST00000479003 NEFLP07196 543 aa37.96■■■■□ 3.67
CHKB-208ENST00000479003 CFAP65Q6ZU64 1925 aaKnown RBP37.94■■■■□ 3.66
CHKB-208ENST00000479003 PRKRIP1Q9H875 184 aaPredicted RBP37.94■■■■□ 3.66
CHKB-208ENST00000479003 HNRNPUQ00839 825 aaKnown RBP eCLIP37.91■■■■□ 3.66
CHKB-208ENST00000479003 BCANQ96GW7 911 aa37.87■■■■□ 3.65
CHKB-208ENST00000479003 ARHGAP31Q2M1Z3 1444 aa37.86■■■■□ 3.65
CHKB-208ENST00000479003 USP47Q96K76 1375 aa37.85■■■■□ 3.65
CHKB-208ENST00000479003 RALGAPBQ86X10 1494 aa37.83■■■■□ 3.65
CHKB-208ENST00000479003 PRAG1Q86YV5 1406 aa37.83■■■■□ 3.65
CHKB-208ENST00000479003 MLECQ14165 292 aa37.82■■■■□ 3.64
CHKB-208ENST00000479003 CCDC184Q52MB2 194 aa37.82■■■■□ 3.64
CHKB-208ENST00000479003 TSHZ2Q9NRE2 1034 aa37.82■■■■□ 3.64
CHKB-208ENST00000479003 NOS1P29475 1434 aa37.82■■■■□ 3.64
CHKB-208ENST00000479003 KIF1BO60333 1816 aa37.79■■■■□ 3.64
CHKB-208ENST00000479003 SYNMO15061 1565 aa37.78■■■■□ 3.64
CHKB-208ENST00000479003 NEURL4Q96JN8 1562 aa37.77■■■■□ 3.64
CHKB-208ENST00000479003 CLTCQ00610 1675 aaKnown RBP37.77■■■■□ 3.64
CHKB-208ENST00000479003 MROH2AA6NES4 1674 aa37.76■■■■□ 3.64
CHKB-208ENST00000479003 PPP6R1Q9UPN7 881 aa37.76■■■■□ 3.63
CHKB-208ENST00000479003 ARID4BQ4LE39 1312 aaPredicted RBP37.75■■■■□ 3.63
CHKB-208ENST00000479003 TRPM1Q7Z4N2 1603 aa37.73■■■■□ 3.63
CHKB-208ENST00000479003 PREX1Q8TCU6 1659 aa37.72■■■■□ 3.63
CHKB-208ENST00000479003 PIK3C2BO00750 1634 aa37.71■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms