RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 EPAS1Q99814 870 aa11.28□□□□□ -0.6
CCDC171-207ENST00000478913 PCDHGA10Q9Y5H3 936 aa11.26□□□□□ -0.61
CCDC171-207ENST00000478913 TYW1BQ6NUM6 668 aa11.25□□□□□ -0.61
CCDC171-207ENST00000478913 ZNF454Q8N9F8 522 aa11.25□□□□□ -0.61
CCDC171-207ENST00000478913 ZC3H15Q8WU90 426 aaKnown RBP11.25□□□□□ -0.61
CCDC171-207ENST00000478913 LHX6Q9UPM6 363 aa11.25□□□□□ -0.61
CCDC171-207ENST00000478913 NUTM2FA1L443 756 aa11.24□□□□□ -0.61
CCDC171-207ENST00000478913 FOSBP53539 338 aa11.24□□□□□ -0.61
CCDC171-207ENST00000478913 EN1Q05925 392 aaPredicted RBP11.23□□□□□ -0.61
CCDC171-207ENST00000478913 FBXW7Q969H0 707 aa11.23□□□□□ -0.61
CCDC171-207ENST00000478913 AXIN2Q9Y2T1 843 aa11.23□□□□□ -0.61
CCDC171-207ENST00000478913 PSDA5PKW4 1024 aaPredicted RBP11.22□□□□□ -0.61
CCDC171-207ENST00000478913 MAP3K7O43318 606 aa11.22□□□□□ -0.61
CCDC171-207ENST00000478913 PRIM1P49642 420 aaKnown RBP11.22□□□□□ -0.61
CCDC171-207ENST00000478913 RBM33Q96EV2 1170 aaKnown RBP11.22□□□□□ -0.61
CCDC171-207ENST00000478913 ZDHHC16Q969W1 377 aa11.21□□□□□ -0.61
CCDC171-207ENST00000478913 PPP4R3BQ5MIZ7 849 aa11.2□□□□□ -0.62
CCDC171-207ENST00000478913 GPR37O15354 613 aa11.16□□□□□ -0.62
CCDC171-207ENST00000478913 ZMYND10O75800 440 aa11.16□□□□□ -0.62
CCDC171-207ENST00000478913 FCHSD2O94868 740 aa11.16□□□□□ -0.62
CCDC171-207ENST00000478913 TSR1Q2NL82 804 aaKnown RBP11.15□□□□□ -0.62
CCDC171-207ENST00000478913 ADAM33Q9BZ11 813 aa11.15□□□□□ -0.62
CCDC171-207ENST00000478913 CDHR5Q9HBB8 845 aa11.15□□□□□ -0.62
CCDC171-207ENST00000478913 HCSTQ9UBK5 93 aa11.15□□□□□ -0.62
CCDC171-207ENST00000478913 PTGDRQ13258 359 aa11.13□□□□□ -0.63
CCDC171-207ENST00000478913 HIC1Q14526 733 aa11.13□□□□□ -0.63
CCDC171-207ENST00000478913 C6orf132Q5T0Z8 1188 aa11.13□□□□□ -0.63
CCDC171-207ENST00000478913 BARGINQ6ZT62 677 aa11.12□□□□□ -0.63
CCDC171-207ENST00000478913 GNPATO15228 680 aa11.11□□□□□ -0.63
CCDC171-207ENST00000478913 BCL2L12Q9HB09 334 aa11.11□□□□□ -0.63
CCDC171-207ENST00000478913 PBX2P40425 430 aa11.1□□□□□ -0.63
CCDC171-207ENST00000478913 KRI1Q8N9T8 703 aaKnown RBP11.1□□□□□ -0.63
CCDC171-207ENST00000478913 CERKQ8TCT0 537 aa11.09□□□□□ -0.63
CCDC171-207ENST00000478913 SLC24A3Q9HC58 644 aa11.09□□□□□ -0.63
CCDC171-207ENST00000478913 PTPREP23469 700 aa11.08□□□□□ -0.64
CCDC171-207ENST00000478913 NPDC1Q9NQX5 325 aaPredicted RBP11.08□□□□□ -0.64
CCDC171-207ENST00000478913 ADGRD1Q6QNK2 874 aa11.07□□□□□ -0.64
CCDC171-207ENST00000478913 KCNH8Q96L42 1107 aa11.07□□□□□ -0.64
CCDC171-207ENST00000478913 MAP2K5Q13163 448 aa11.05□□□□□ -0.64
CCDC171-207ENST00000478913 PPP1R3GB7ZBB8 358 aa11.04□□□□□ -0.64
CCDC171-207ENST00000478913 FECHP22830 423 aa11.04□□□□□ -0.64
CCDC171-207ENST00000478913 KCNK17Q96T54 332 aa11.04□□□□□ -0.64
CCDC171-207ENST00000478913 MINK1Q8N4C8 1332 aaPredicted RBP11.03□□□□□ -0.64
CCDC171-207ENST00000478913 HRO43593 1189 aa11.02□□□□□ -0.65
CCDC171-207ENST00000478913 COL9A1P20849 921 aa11.02□□□□□ -0.65
CCDC171-207ENST00000478913 AK7Q96M32 723 aa11.02□□□□□ -0.65
CCDC171-207ENST00000478913 DMRTA1Q5VZB9 504 aa11.01□□□□□ -0.65
CCDC171-207ENST00000478913 PRSS12P56730 875 aa11□□□□□ -0.65
CCDC171-207ENST00000478913 PADI6Q6TGC4 694 aa11□□□□□ -0.65
CCDC171-207ENST00000478913 CCDC102AQ96A19 550 aa11□□□□□ -0.65
CCDC171-207ENST00000478913 RBM27Q9P2N5 1060 aaKnown RBP11□□□□□ -0.65
CCDC171-207ENST00000478913 ARHGAP33O14559 1287 aa10.99□□□□□ -0.65
CCDC171-207ENST00000478913 IRF6O14896 467 aa10.99□□□□□ -0.65
CCDC171-207ENST00000478913 CDCA7LQ96GN5 454 aa10.99□□□□□ -0.65
CCDC171-207ENST00000478913 PSEN2P49810 448 aa10.98□□□□□ -0.65
CCDC171-207ENST00000478913 KCTD12Q96CX2 325 aaKnown RBP10.95□□□□□ -0.66
CCDC171-207ENST00000478913 TTC13Q8NBP0 860 aa10.94□□□□□ -0.66
CCDC171-207ENST00000478913 TRIM6-TRIM34B2RNG4 842 aa10.93□□□□□ -0.66
CCDC171-207ENST00000478913 TRIM66O15016 1216 aa10.93□□□□□ -0.66
CCDC171-207ENST00000478913 PROX2Q3B8N5 592 aa10.93□□□□□ -0.66
CCDC171-207ENST00000478913 ZBED2Q9BTP6 218 aa10.93□□□□□ -0.66
CCDC171-207ENST00000478913 FAM161AQ3B820 660 aa10.92□□□□□ -0.66
CCDC171-207ENST00000478913 TSKSQ9UJT2 592 aa10.92□□□□□ -0.66
CCDC171-207ENST00000478913 FAM198AQ9UFP1 575 aa10.91□□□□□ -0.66
CCDC171-207ENST00000478913 ADGRG1Q9Y653 693 aa10.91□□□□□ -0.66
CCDC171-207ENST00000478913 NBPF26B4DH59 902 aa10.9□□□□□ -0.66
CCDC171-207ENST00000478913 TK2O00142 265 aa10.9□□□□□ -0.66
CCDC171-207ENST00000478913 OATP04181 439 aa10.9□□□□□ -0.66
CCDC171-207ENST00000478913 NEUROD2Q15784 382 aa10.9□□□□□ -0.66
CCDC171-207ENST00000478913 PACS2Q86VP3 889 aa10.9□□□□□ -0.66
CCDC171-207ENST00000478913 ONECUT3O60422 494 aaPredicted RBP10.89□□□□□ -0.67
CCDC171-207ENST00000478913 PDE4DQ08499 809 aa10.89□□□□□ -0.67
CCDC171-207ENST00000478913 SLC4A5Q9BY07 1137 aa10.89□□□□□ -0.67
CCDC171-207ENST00000478913 IRX2Q9BZI1 471 aaPredicted RBP10.89□□□□□ -0.67
CCDC171-207ENST00000478913 NISCHQ9Y2I1 1504 aa10.89□□□□□ -0.67
CCDC171-207ENST00000478913 BRPF1P55201 1214 aaPredicted RBP10.88□□□□□ -0.67
CCDC171-207ENST00000478913 METTL3Q86U44 580 aaKnown RBP10.88□□□□□ -0.67
CCDC171-207ENST00000478913 RBM46Q8TBY0 533 aaKnown RBP10.88□□□□□ -0.67
CCDC171-207ENST00000478913 AMHR2Q16671 573 aa10.87□□□□□ -0.67
CCDC171-207ENST00000478913 PXYLP1Q8TE99 480 aa10.87□□□□□ -0.67
CCDC171-207ENST00000478913 PNMA3Q9UL41 463 aa10.87□□□□□ -0.67
CCDC171-207ENST00000478913 NUDT18Q6ZVK8 323 aa10.86□□□□□ -0.67
CCDC171-207ENST00000478913 TATDN2Q93075 761 aa10.86□□□□□ -0.67
CCDC171-207ENST00000478913 KIAA1468Q9P260 1216 aa10.86□□□□□ -0.67
CCDC171-207ENST00000478913 TTLL12Q14166 644 aaPredicted RBP10.85□□□□□ -0.67
CCDC171-207ENST00000478913 RABGEF1Q9UJ41 708 aa10.85□□□□□ -0.67
CCDC171-207ENST00000478913 VPS9D1Q9Y2B5 631 aa10.85□□□□□ -0.67
CCDC171-207ENST00000478913 C3orf80F5H4A9 247 aa10.83□□□□□ -0.68
CCDC171-207ENST00000478913 PHOX2BQ99453 314 aa10.83□□□□□ -0.68
CCDC171-207ENST00000478913 GPBP1L1Q9HC44 474 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-207ENST00000478913 SMAPO00193 183 aa10.82□□□□□ -0.68
CCDC171-207ENST00000478913 PTPN5P54829 565 aa10.82□□□□□ -0.68
CCDC171-207ENST00000478913 PARP9Q8IXQ6 854 aa10.82□□□□□ -0.68
CCDC171-207ENST00000478913 EYA1Q99502 592 aa10.82□□□□□ -0.68
CCDC171-207ENST00000478913 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.81□□□□□ -0.68
CCDC171-207ENST00000478913 RGS20O76081 388 aa10.81□□□□□ -0.68
CCDC171-207ENST00000478913 CLCN1P35523 988 aa10.81□□□□□ -0.68
CCDC171-207ENST00000478913 MDM2Q00987 491 aaPredicted RBP10.81□□□□□ -0.68
CCDC171-207ENST00000478913 NLRP7Q8WX94 980 aa10.81□□□□□ -0.68
CCDC171-207ENST00000478913 A0A0G2JS52 829 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms