RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 MAP3K1Q13233 1512 aa25.07■■□□□ 1.6
GARNL3-215ENST00000478702 CAMSAP2Q08AD1 1489 aa25.04■■□□□ 1.6
GARNL3-215ENST00000478702 NEURL4Q96JN8 1562 aa25.04■■□□□ 1.6
GARNL3-215ENST00000478702 CCDC141Q6ZP82 1450 aa25.03■■□□□ 1.6
GARNL3-215ENST00000478702 SOCS7O14512 581 aa25.03■■□□□ 1.6
GARNL3-215ENST00000478702 NCOA2Q15596 1464 aa25.02■■□□□ 1.6
GARNL3-215ENST00000478702 LRRC9Q6ZRR7 1453 aa25.02■■□□□ 1.6
GARNL3-215ENST00000478702 KDM5DQ9BY66 1539 aa25.02■■□□□ 1.6
GARNL3-215ENST00000478702 FAM135AQ9P2D6 1515 aa25.01■■□□□ 1.59
GARNL3-215ENST00000478702 UBAP1LF5GYI3 381 aa24.99■■□□□ 1.59
GARNL3-215ENST00000478702 PZPP20742 1482 aa24.99■■□□□ 1.59
GARNL3-215ENST00000478702 ARHGEF5Q12774 1597 aa24.98■■□□□ 1.59
GARNL3-215ENST00000478702 KIF3BO15066 747 aa24.98■■□□□ 1.59
GARNL3-215ENST00000478702 FBXO31Q5XUX0 539 aaPredicted RBP24.98■■□□□ 1.59
GARNL3-215ENST00000478702 TNRQ92752 1358 aa24.96■■□□□ 1.59
GARNL3-215ENST00000478702 RNF17Q9BXT8 1623 aaKnown RBP24.91■■□□□ 1.58
GARNL3-215ENST00000478702 RSPH4AQ5TD94 716 aa24.91■■□□□ 1.58
GARNL3-215ENST00000478702 CPS1P31327 1500 aa24.9■■□□□ 1.58
GARNL3-215ENST00000478702 VWDEQ8N2E2 1590 aa24.89■■□□□ 1.58
GARNL3-215ENST00000478702 CFAP65Q6ZU64 1925 aaKnown RBP24.89■■□□□ 1.58
GARNL3-215ENST00000478702 DEPDC5O75140 1603 aa24.89■■□□□ 1.57
GARNL3-215ENST00000478702 MAST1Q9Y2H9 1570 aa24.88■■□□□ 1.57
GARNL3-215ENST00000478702 WASHC2CQ9Y4E1 1318 aa24.88■■□□□ 1.57
GARNL3-215ENST00000478702 ZC3H13Q5T200 1668 aaKnown RBP24.88■■□□□ 1.57
GARNL3-215ENST00000478702 SHANK2Q9UPX8 1470 aa24.88■■□□□ 1.57
GARNL3-215ENST00000478702 UGGT1Q9NYU2 1555 aa24.88■■□□□ 1.57
GARNL3-215ENST00000478702 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.87■■□□□ 1.57
GARNL3-215ENST00000478702 MIA2Q96PC5 1412 aa24.86■■□□□ 1.57
GARNL3-215ENST00000478702 STRCP1A6NGW2 1772 aa24.86■■□□□ 1.57
GARNL3-215ENST00000478702 NLRP1Q9C000 1473 aa24.86■■□□□ 1.57
GARNL3-215ENST00000478702 CEP152O94986 1710 aa24.85■■□□□ 1.57
GARNL3-215ENST00000478702 EIF2AK4Q9P2K8 1649 aaKnown RBP24.85■■□□□ 1.57
GARNL3-215ENST00000478702 IQGAP1P46940 1657 aa24.85■■□□□ 1.57
GARNL3-215ENST00000478702 MROH1Q8NDA8 1641 aa24.84■■□□□ 1.57
GARNL3-215ENST00000478702 ABCC3O15438 1527 aa24.84■■□□□ 1.57
GARNL3-215ENST00000478702 MED14O60244 1454 aa24.83■■□□□ 1.57
GARNL3-215ENST00000478702 ALKQ9UM73 1620 aa24.83■■□□□ 1.56
GARNL3-215ENST00000478702 KANK4Q5T7N3 995 aaPredicted RBP24.82■■□□□ 1.56
GARNL3-215ENST00000478702 TSPY4P0CV99 314 aa24.81■■□□□ 1.56
GARNL3-215ENST00000478702 TSPY10P0CW01 314 aa24.81■■□□□ 1.56
GARNL3-215ENST00000478702 ANKLE2Q86XL3 938 aa24.8■■□□□ 1.56
GARNL3-215ENST00000478702 NPHP4O75161 1426 aaPredicted RBP24.79■■□□□ 1.56
GARNL3-215ENST00000478702 THEMISQ8N1K5 641 aaPredicted RBP24.79■■□□□ 1.56
GARNL3-215ENST00000478702 MYOM3Q5VTT5 1437 aa24.78■■□□□ 1.56
GARNL3-215ENST00000478702 MED1Q15648 1581 aaPredicted RBP24.78■■□□□ 1.56
GARNL3-215ENST00000478702 UBR1Q8IWV7 1749 aa24.78■■□□□ 1.56
GARNL3-215ENST00000478702 HSPA1LP34931 641 aa24.77■■□□□ 1.56
GARNL3-215ENST00000478702 ERVK-7P63135 1459 aa24.76■■□□□ 1.55
GARNL3-215ENST00000478702 PIP4K2BP78356 416 aa24.75■■□□□ 1.55
GARNL3-215ENST00000478702 SCAF1Q9H7N4 1312 aaKnown RBP24.75■■□□□ 1.55
GARNL3-215ENST00000478702 TOM1O60784 492 aa24.74■■□□□ 1.55
GARNL3-215ENST00000478702 CROCC2H7BZ55 1655 aa24.73■■□□□ 1.55
GARNL3-215ENST00000478702 APLP2Q06481 763 aa24.73■■□□□ 1.55
GARNL3-215ENST00000478702 PTPN23Q9H3S7 1636 aa24.7■■□□□ 1.54
GARNL3-215ENST00000478702 SYNMO15061 1565 aa24.7■■□□□ 1.54
GARNL3-215ENST00000478702 DUOX2Q9NRD8 1548 aa24.69■■□□□ 1.54
GARNL3-215ENST00000478702 XIRP1Q702N8 1843 aaKnown RBP24.68■■□□□ 1.54
GARNL3-215ENST00000478702 LRRC7Q96NW7 1537 aa24.68■■□□□ 1.54
GARNL3-215ENST00000478702 PRDM15P57071 1507 aaPredicted RBP24.66■■□□□ 1.54
GARNL3-215ENST00000478702 FGD6Q6ZV73 1430 aa24.63■■□□□ 1.53
GARNL3-215ENST00000478702 ARHGAP23Q9P227 1491 aa24.62■■□□□ 1.53
GARNL3-215ENST00000478702 SLIT1O75093 1534 aa24.61■■□□□ 1.53
GARNL3-215ENST00000478702 SCAF11Q99590 1463 aaKnown RBP24.61■■□□□ 1.53
GARNL3-215ENST00000478702 PIK3C2BO00750 1634 aa24.61■■□□□ 1.53
GARNL3-215ENST00000478702 ARHGAP31Q2M1Z3 1444 aa24.6■■□□□ 1.53
GARNL3-215ENST00000478702 ABCC5O15440 1437 aa24.58■■□□□ 1.53
GARNL3-215ENST00000478702 KIF15Q9NS87 1388 aa24.57■■□□□ 1.52
GARNL3-215ENST00000478702 ERBINQ96RT1 1412 aa24.57■■□□□ 1.52
GARNL3-215ENST00000478702 LTKP29376 864 aa24.56■■□□□ 1.52
GARNL3-215ENST00000478702 KDM5AP29375 1690 aaKnown RBP24.54■■□□□ 1.52
GARNL3-215ENST00000478702 DAPK1P53355 1430 aa24.52■■□□□ 1.52
GARNL3-215ENST00000478702 RRP7BPQ9NSQ0 103 aa24.51■■□□□ 1.51
GARNL3-215ENST00000478702 TXNDC2Q86VQ3 553 aa24.5■■□□□ 1.51
GARNL3-215ENST00000478702 SENP3Q9H4L4 574 aaPredicted RBP24.49■■□□□ 1.51
GARNL3-215ENST00000478702 LMTK2Q8IWU2 1503 aa24.47■■□□□ 1.51
GARNL3-215ENST00000478702 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.46■■□□□ 1.51
GARNL3-215ENST00000478702 TMEM2Q9UHN6 1383 aa24.45■■□□□ 1.5
GARNL3-215ENST00000478702 EFCAB6Q5THR3 1501 aa24.45■■□□□ 1.5
GARNL3-215ENST00000478702 PHF23Q9BUL5 403 aaPredicted RBP24.44■■□□□ 1.5
GARNL3-215ENST00000478702 MYO5BQ9ULV0 1848 aa24.43■■□□□ 1.5
GARNL3-215ENST00000478702 TET3O43151 1660 aa24.43■■□□□ 1.5
GARNL3-215ENST00000478702 EID1Q9Y6B2 187 aa24.42■■□□□ 1.5
GARNL3-215ENST00000478702 KANK1Q14678 1352 aa24.41■■□□□ 1.5
GARNL3-215ENST00000478702 IDI1Q13907 227 aa24.4■■□□□ 1.5
GARNL3-215ENST00000478702 ADGRL2O95490 1459 aa24.38■■□□□ 1.49
GARNL3-215ENST00000478702 NOS1P29475 1434 aa24.38■■□□□ 1.49
GARNL3-215ENST00000478702 CHIC2Q9UKJ5 165 aa24.38■■□□□ 1.49
GARNL3-215ENST00000478702 ADGRB3O60242 1522 aa24.38■■□□□ 1.49
GARNL3-215ENST00000478702 ANKRD30AQ9BXX3 1397 aa24.38■■□□□ 1.49
GARNL3-215ENST00000478702 ROBO1Q9Y6N7 1651 aa24.37■■□□□ 1.49
GARNL3-215ENST00000478702 NWD1Q149M9 1564 aa24.36■■□□□ 1.49
GARNL3-215ENST00000478702 STAG3Q9UJ98 1225 aa24.35■■□□□ 1.49
GARNL3-215ENST00000478702 FAM135BQ49AJ0 1406 aa24.35■■□□□ 1.49
GARNL3-215ENST00000478702 TMEM94Q12767 1356 aa24.34■■□□□ 1.49
GARNL3-215ENST00000478702 RGS17Q9UGC6 210 aaPredicted RBP24.34■■□□□ 1.49
GARNL3-215ENST00000478702 GCC2Q8IWJ2 1684 aa24.34■■□□□ 1.49
GARNL3-215ENST00000478702 CHD2O14647 1828 aaKnown RBP24.33■■□□□ 1.48
GARNL3-215ENST00000478702 KCNA6P17658 529 aa24.32■■□□□ 1.48
GARNL3-215ENST00000478702 SLC26A8Q96RN1 970 aa24.31■■□□□ 1.48
GARNL3-215ENST00000478702 FAM50AQ14320 339 aaKnown RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms