RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 CARD11Q9BXL7 1154 aa8.24□□□□□ -1.09
SH3D19-207ENST00000478503 ARID4BQ4LE39 1312 aaPredicted RBP8.24□□□□□ -1.09
SH3D19-207ENST00000478503 CAMSAP2Q08AD1 1489 aa8.24□□□□□ -1.09
SH3D19-207ENST00000478503 SYNJ2O15056 1496 aa8.24□□□□□ -1.09
SH3D19-207ENST00000478503 NCOA1Q15788 1441 aa8.24□□□□□ -1.09
SH3D19-207ENST00000478503 CCDC7Q96M83 1385 aa8.24□□□□□ -1.09
SH3D19-207ENST00000478503 MYT1LQ9UL68 1186 aa8.24□□□□□ -1.09
SH3D19-207ENST00000478503 KIF14Q15058 1648 aa8.24□□□□□ -1.09
SH3D19-207ENST00000478503 PTPRGP23470 1445 aa8.23□□□□□ -1.09
SH3D19-207ENST00000478503 RAPGEF6Q8TEU7 1601 aa8.23□□□□□ -1.09
SH3D19-207ENST00000478503 AKNAQ7Z591 1439 aa8.23□□□□□ -1.09
SH3D19-207ENST00000478503 ANKRD50Q9ULJ7 1429 aa8.23□□□□□ -1.09
SH3D19-207ENST00000478503 ANKRD30AQ9BXX3 1397 aa8.22□□□□□ -1.09
SH3D19-207ENST00000478503 ST20-MTHFSA0A0A6YYL1 179 aa8.22□□□□□ -1.09
SH3D19-207ENST00000478503 ATP10BO94823 1461 aa8.21□□□□□ -1.09
SH3D19-207ENST00000478503 SENP3Q9H4L4 574 aaPredicted RBP8.21□□□□□ -1.1
SH3D19-207ENST00000478503 ROCK1Q13464 1354 aa8.2□□□□□ -1.1
SH3D19-207ENST00000478503 RPRD2Q5VT52 1461 aaKnown RBP8.2□□□□□ -1.1
SH3D19-207ENST00000478503 MAGI1Q96QZ7 1491 aaPredicted RBP8.2□□□□□ -1.1
SH3D19-207ENST00000478503 USP47Q96K76 1375 aa8.2□□□□□ -1.1
SH3D19-207ENST00000478503 PZPP20742 1482 aa8.2□□□□□ -1.1
SH3D19-207ENST00000478503 KIF15Q9NS87 1388 aa8.2□□□□□ -1.1
SH3D19-207ENST00000478503 NBPF1Q3BBV0 1214 aa8.2□□□□□ -1.1
SH3D19-207ENST00000478503 ZNF428Q96B54 188 aa8.2□□□□□ -1.1
SH3D19-207ENST00000478503 RBM25P49756 843 aaKnown RBP8.19□□□□□ -1.1
SH3D19-207ENST00000478503 CNTLNQ9NXG0 1405 aa8.19□□□□□ -1.1
SH3D19-207ENST00000478503 B4GALNT3Q6L9W6 998 aa8.19□□□□□ -1.1
SH3D19-207ENST00000478503 C9orf84Q5VXU9 1444 aa8.19□□□□□ -1.1
SH3D19-207ENST00000478503 KIAA1107Q9UPP5 1409 aa8.18□□□□□ -1.1
SH3D19-207ENST00000478503 ZNF592Q92610 1267 aa8.18□□□□□ -1.1
SH3D19-207ENST00000478503 TEX14Q8IWB6 1497 aa8.17□□□□□ -1.1
SH3D19-207ENST00000478503 GLIPR1L2Q4G1C9 344 aa8.17□□□□□ -1.1
SH3D19-207ENST00000478503 DNMT1P26358 1616 aaKnown RBP8.17□□□□□ -1.1
SH3D19-207ENST00000478503 NUP160Q12769 1436 aa8.17□□□□□ -1.1
SH3D19-207ENST00000478503 PPM1GO15355 546 aaPredicted RBP8.17□□□□□ -1.1
SH3D19-207ENST00000478503 GCC2Q8IWJ2 1684 aa8.17□□□□□ -1.1
SH3D19-207ENST00000478503 TMC1Q8TDI8 760 aa8.17□□□□□ -1.1
SH3D19-207ENST00000478503 AFAP1Q8N556 730 aa8.16□□□□□ -1.1
SH3D19-207ENST00000478503 PRDM10Q9NQV6 1147 aa8.16□□□□□ -1.1
SH3D19-207ENST00000478503 NPM3O75607 178 aaKnown RBP8.16□□□□□ -1.1
SH3D19-207ENST00000478503 CC2D1BQ5T0F9 858 aaKnown RBP8.16□□□□□ -1.1
SH3D19-207ENST00000478503 RAD21O60216 631 aa8.15□□□□□ -1.1
SH3D19-207ENST00000478503 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.15□□□□□ -1.1
SH3D19-207ENST00000478503 RBM19Q9Y4C8 960 aaKnown RBP8.15□□□□□ -1.1
SH3D19-207ENST00000478503 ROCK2O75116 1388 aaKnown RBP8.14□□□□□ -1.11
SH3D19-207ENST00000478503 BRPF3Q9ULD4 1205 aa8.14□□□□□ -1.11
SH3D19-207ENST00000478503 SPATA31E1Q6ZUB1 1445 aa8.13□□□□□ -1.11
SH3D19-207ENST00000478503 ERCC6L2Q5T890 1561 aa8.13□□□□□ -1.11
SH3D19-207ENST00000478503 TRHP20396 242 aaPredicted RBP8.13□□□□□ -1.11
SH3D19-207ENST00000478503 ZFP91Q96JP5 570 aaPredicted RBP8.12□□□□□ -1.11
SH3D19-207ENST00000478503 ABCC10Q5T3U5 1492 aa8.12□□□□□ -1.11
SH3D19-207ENST00000478503 DNAJC5Q9H3Z4 198 aa8.11□□□□□ -1.11
SH3D19-207ENST00000478503 DEKP35659 375 aaKnown RBP8.11□□□□□ -1.11
SH3D19-207ENST00000478503 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.11□□□□□ -1.11
SH3D19-207ENST00000478503 CWC22Q9HCG8 908 aaKnown RBP8.11□□□□□ -1.11
SH3D19-207ENST00000478503 BCCIPQ9P287 314 aaKnown RBP eCLIP8.11□□□□□ -1.11
SH3D19-207ENST00000478503 ARHGAP5Q13017 1502 aa8.11□□□□□ -1.11
SH3D19-207ENST00000478503 PSMD1Q99460 953 aa8.11□□□□□ -1.11
SH3D19-207ENST00000478503 ANP32EQ9BTT0 268 aa8.11□□□□□ -1.11
SH3D19-207ENST00000478503 FOXD4L5Q5VV16 416 aaPredicted RBP8.1□□□□□ -1.11
SH3D19-207ENST00000478503 FOXD4L4Q8WXT5 416 aaPredicted RBP8.1□□□□□ -1.11
SH3D19-207ENST00000478503 PLEKHH2Q8IVE3 1493 aa8.1□□□□□ -1.11
SH3D19-207ENST00000478503 DHX29Q7Z478 1369 aaKnown RBP8.1□□□□□ -1.11
SH3D19-207ENST00000478503 KCTD17Q8N5Z5 321 aa8.1□□□□□ -1.11
SH3D19-207ENST00000478503 CCDC144AA2RUR9 1427 aa8.1□□□□□ -1.11
SH3D19-207ENST00000478503 CHGAP10645 457 aaKnown RBP8.1□□□□□ -1.11
SH3D19-207ENST00000478503 MBD5Q9P267 1494 aa8.09□□□□□ -1.11
SH3D19-207ENST00000478503 ABCA8O94911 1581 aa8.09□□□□□ -1.11
SH3D19-207ENST00000478503 AEBP1Q8IUX7 1158 aa8.09□□□□□ -1.11
SH3D19-207ENST00000478503 EFCAB2Q5VUJ9 269 aa8.09□□□□□ -1.11
SH3D19-207ENST00000478503 ZBED9Q6R2W3 1325 aa8.09□□□□□ -1.11
SH3D19-207ENST00000478503 SYCP2Q9BX26 1530 aa8.09□□□□□ -1.12
SH3D19-207ENST00000478503 PNISRQ8TF01 805 aaKnown RBP8.08□□□□□ -1.12
SH3D19-207ENST00000478503 PANK3Q9H999 370 aa8.08□□□□□ -1.12
SH3D19-207ENST00000478503 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.08□□□□□ -1.12
SH3D19-207ENST00000478503 ADGRL2O95490 1459 aa8.07□□□□□ -1.12
SH3D19-207ENST00000478503 KIF3BO15066 747 aa8.07□□□□□ -1.12
SH3D19-207ENST00000478503 CDC42BPAQ5VT25 1732 aa8.07□□□□□ -1.12
SH3D19-207ENST00000478503 BCORL1Q5H9F3 1711 aa8.07□□□□□ -1.12
SH3D19-207ENST00000478503 CCDC141Q6ZP82 1450 aa8.07□□□□□ -1.12
SH3D19-207ENST00000478503 NUTM2DQ5VT03 806 aaPredicted RBP8.07□□□□□ -1.12
SH3D19-207ENST00000478503 SPAG9O60271 1321 aaKnown RBP8.07□□□□□ -1.12
SH3D19-207ENST00000478503 NCLP19338 710 aaKnown RBP8.06□□□□□ -1.12
SH3D19-207ENST00000478503 CDCA7LQ96GN5 454 aa8.06□□□□□ -1.12
SH3D19-207ENST00000478503 PPP4R2Q9NY27 417 aa8.06□□□□□ -1.12
SH3D19-207ENST00000478503 ITSN2Q9NZM3 1697 aa8.06□□□□□ -1.12
SH3D19-207ENST00000478503 NECTIN2Q92692 538 aa8.06□□□□□ -1.12
SH3D19-207ENST00000478503 TRAPPC8Q9Y2L5 1435 aa8.05□□□□□ -1.12
SH3D19-207ENST00000478503 SAMD9LQ8IVG5 1584 aa8.05□□□□□ -1.12
SH3D19-207ENST00000478503 RBM10P98175 930 aaKnown RBP8.05□□□□□ -1.12
SH3D19-207ENST00000478503 PLIN1O60240 522 aa8.05□□□□□ -1.12
SH3D19-207ENST00000478503 ARHGEF12Q9NZN5 1544 aa8.05□□□□□ -1.12
SH3D19-207ENST00000478503 FAM135AQ9P2D6 1515 aa8.05□□□□□ -1.12
SH3D19-207ENST00000478503 DISP3Q9P2K9 1392 aa8.05□□□□□ -1.12
SH3D19-207ENST00000478503 RSPH4AQ5TD94 716 aa8.04□□□□□ -1.12
SH3D19-207ENST00000478503 TTC37Q6PGP7 1564 aa8.04□□□□□ -1.12
SH3D19-207ENST00000478503 NUDCQ9Y266 331 aa8.04□□□□□ -1.12
SH3D19-207ENST00000478503 PLA2R1Q13018 1463 aa8.04□□□□□ -1.12
SH3D19-207ENST00000478503 MSH5O43196 834 aa8.04□□□□□ -1.12
SH3D19-207ENST00000478503 GGT6Q6P531 493 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms