RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 SEC24BO95487 1268 aa12.81□□□□□ -0.36
COL13A1-207ENST00000478219 PNNQ9H307 717 aaKnown RBP12.81□□□□□ -0.36
COL13A1-207ENST00000478219 CENPQQ7L2Z9 268 aaPredicted RBP12.8□□□□□ -0.36
COL13A1-207ENST00000478219 HSP90AA1P07900 732 aaKnown RBP12.79□□□□□ -0.36
COL13A1-207ENST00000478219 RALBP1Q15311 655 aa12.79□□□□□ -0.36
COL13A1-207ENST00000478219 ST20-MTHFSA0A0A6YYL1 179 aa12.78□□□□□ -0.36
COL13A1-207ENST00000478219 RRP9O43818 475 aaKnown RBP12.78□□□□□ -0.36
COL13A1-207ENST00000478219 RAD54L2Q9Y4B4 1467 aa12.78□□□□□ -0.36
COL13A1-207ENST00000478219 CLCN1P35523 988 aa12.78□□□□□ -0.36
COL13A1-207ENST00000478219 ARID4BQ4LE39 1312 aaPredicted RBP12.78□□□□□ -0.36
COL13A1-207ENST00000478219 ARID3CA6NKF2 412 aa12.77□□□□□ -0.36
COL13A1-207ENST00000478219 NLRP13Q86W25 1043 aa12.77□□□□□ -0.37
COL13A1-207ENST00000478219 GZF1Q9H116 711 aaPredicted RBP12.77□□□□□ -0.37
COL13A1-207ENST00000478219 ROCK2O75116 1388 aaKnown RBP12.77□□□□□ -0.37
COL13A1-207ENST00000478219 L1TD1Q5T7N2 865 aaKnown RBP12.76□□□□□ -0.37
COL13A1-207ENST00000478219 CARD11Q9BXL7 1154 aa12.76□□□□□ -0.37
COL13A1-207ENST00000478219 URB2Q14146 1524 aaKnown RBP12.75□□□□□ -0.37
COL13A1-207ENST00000478219 TULP1O00294 542 aaPredicted RBP12.75□□□□□ -0.37
COL13A1-207ENST00000478219 ANTXR1Q9H6X2 564 aa12.75□□□□□ -0.37
COL13A1-207ENST00000478219 DNAJC5BQ9UF47 199 aa12.75□□□□□ -0.37
COL13A1-207ENST00000478219 ZNF644Q9H582 1327 aaPredicted RBP12.75□□□□□ -0.37
COL13A1-207ENST00000478219 PARD3Q8TEW0 1356 aa12.74□□□□□ -0.37
COL13A1-207ENST00000478219 FSD2A1L4K1 749 aa12.74□□□□□ -0.37
COL13A1-207ENST00000478219 KLHL34Q8N239 644 aa12.74□□□□□ -0.37
COL13A1-207ENST00000478219 KIF14Q15058 1648 aa12.74□□□□□ -0.37
COL13A1-207ENST00000478219 PZPP20742 1482 aa12.74□□□□□ -0.37
COL13A1-207ENST00000478219 ERBB4Q15303 1308 aa12.74□□□□□ -0.37
COL13A1-207ENST00000478219 PODXL2Q9NZ53 605 aa12.73□□□□□ -0.37
COL13A1-207ENST00000478219 CC2D1BQ5T0F9 858 aaKnown RBP12.73□□□□□ -0.37
COL13A1-207ENST00000478219 E9PCH4 1651 aa12.72□□□□□ -0.37
COL13A1-207ENST00000478219 GOLGA6L3A6NEY3 463 aa12.72□□□□□ -0.37
COL13A1-207ENST00000478219 SPRYD3Q8NCJ5 442 aa12.72□□□□□ -0.37
COL13A1-207ENST00000478219 BLMP54132 1417 aaPredicted RBP12.71□□□□□ -0.37
COL13A1-207ENST00000478219 IGHDP01880 384 aa12.71□□□□□ -0.37
COL13A1-207ENST00000478219 KDM2AQ9Y2K7 1162 aa12.71□□□□□ -0.37
COL13A1-207ENST00000478219 DAPK1P53355 1430 aa12.71□□□□□ -0.38
COL13A1-207ENST00000478219 PER1O15534 1290 aaPredicted RBP12.71□□□□□ -0.38
COL13A1-207ENST00000478219 ABCC5O15440 1437 aa12.7□□□□□ -0.38
COL13A1-207ENST00000478219 DUSP27Q5VZP5 1158 aa12.7□□□□□ -0.38
COL13A1-207ENST00000478219 NLRP1Q9C000 1473 aa12.7□□□□□ -0.38
COL13A1-207ENST00000478219 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
COL13A1-207ENST00000478219 PLEKHH1Q9ULM0 1364 aa12.7□□□□□ -0.38
COL13A1-207ENST00000478219 RALGAPBQ86X10 1494 aa12.69□□□□□ -0.38
COL13A1-207ENST00000478219 PKD2Q13563 968 aa12.69□□□□□ -0.38
COL13A1-207ENST00000478219 ADAMTS8Q9UP79 889 aa12.68□□□□□ -0.38
COL13A1-207ENST00000478219 CDK13Q14004 1512 aaKnown RBP12.68□□□□□ -0.38
COL13A1-207ENST00000478219 ZMYM4Q5VZL5 1548 aa12.68□□□□□ -0.38
COL13A1-207ENST00000478219 VIRMAQ69YN4 1812 aaKnown RBP12.68□□□□□ -0.38
COL13A1-207ENST00000478219 GAPVD1Q14C86 1478 aa12.68□□□□□ -0.38
COL13A1-207ENST00000478219 ROCK1Q13464 1354 aa12.67□□□□□ -0.38
COL13A1-207ENST00000478219 TBC1D2Q9BYX2 928 aa12.67□□□□□ -0.38
COL13A1-207ENST00000478219 ZNF608Q9ULD9 1512 aaPredicted RBP12.66□□□□□ -0.38
COL13A1-207ENST00000478219 BECN1Q14457 450 aa12.66□□□□□ -0.38
COL13A1-207ENST00000478219 KIAA1107Q9UPP5 1409 aa12.65□□□□□ -0.38
COL13A1-207ENST00000478219 ESPNB1AK53 854 aa12.65□□□□□ -0.38
COL13A1-207ENST00000478219 MCM4P33991 863 aa12.65□□□□□ -0.38
COL13A1-207ENST00000478219 UHRF1BP1Q6BDS2 1440 aa12.65□□□□□ -0.38
COL13A1-207ENST00000478219 BCAR3O75815 825 aa12.65□□□□□ -0.39
COL13A1-207ENST00000478219 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
COL13A1-207ENST00000478219 TARBP1Q13395 1621 aaKnown RBP12.63□□□□□ -0.39
COL13A1-207ENST00000478219 WDR62O43379 1518 aa12.63□□□□□ -0.39
COL13A1-207ENST00000478219 EPRSP07814 1512 aaKnown RBP12.63□□□□□ -0.39
COL13A1-207ENST00000478219 TRAK2O60296 914 aa12.63□□□□□ -0.39
COL13A1-207ENST00000478219 DNMT1P26358 1616 aaKnown RBP12.63□□□□□ -0.39
COL13A1-207ENST00000478219 PRDM4Q9UKN5 801 aa12.62□□□□□ -0.39
COL13A1-207ENST00000478219 ZNF521Q96K83 1311 aa12.61□□□□□ -0.39
COL13A1-207ENST00000478219 GRPEL1Q9HAV7 217 aa12.61□□□□□ -0.39
COL13A1-207ENST00000478219 KIAA0586Q9BVV6 1533 aa12.61□□□□□ -0.39
COL13A1-207ENST00000478219 MYH16Q9H6N6 1097 aa12.61□□□□□ -0.39
COL13A1-207ENST00000478219 MRE11P49959 708 aa12.6□□□□□ -0.39
COL13A1-207ENST00000478219 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
COL13A1-207ENST00000478219 IQGAP2Q13576 1575 aa12.6□□□□□ -0.39
COL13A1-207ENST00000478219 TBC1D32Q96NH3 1257 aa12.6□□□□□ -0.39
COL13A1-207ENST00000478219 PANK3Q9H999 370 aa12.6□□□□□ -0.39
COL13A1-207ENST00000478219 PLEKHH2Q8IVE3 1493 aa12.6□□□□□ -0.39
COL13A1-207ENST00000478219 PBRM1Q86U86 1689 aa12.59□□□□□ -0.39
COL13A1-207ENST00000478219 GOLGA2Q08379 1002 aa12.59□□□□□ -0.39
COL13A1-207ENST00000478219 GAS2L3Q86XJ1 694 aa12.59□□□□□ -0.39
COL13A1-207ENST00000478219 EIF3AQ14152 1382 aaKnown RBP12.59□□□□□ -0.39
COL13A1-207ENST00000478219 NBPF1Q3BBV0 1214 aa12.59□□□□□ -0.39
COL13A1-207ENST00000478219 PDCL3Q9H2J4 239 aa12.59□□□□□ -0.39
COL13A1-207ENST00000478219 A0A0U1RQG5 324 aaPredicted RBP12.58□□□□□ -0.4
COL13A1-207ENST00000478219 SLFN5Q08AF3 891 aa12.58□□□□□ -0.4
COL13A1-207ENST00000478219 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.58□□□□□ -0.4
COL13A1-207ENST00000478219 DISP3Q9P2K9 1392 aa12.58□□□□□ -0.4
COL13A1-207ENST00000478219 TDRD9Q8NDG6 1382 aaKnown RBP12.58□□□□□ -0.4
COL13A1-207ENST00000478219 DMRT2Q9Y5R5 561 aa12.57□□□□□ -0.4
COL13A1-207ENST00000478219 INSRP06213 1382 aa12.57□□□□□ -0.4
COL13A1-207ENST00000478219 CAMSAP2Q08AD1 1489 aa12.57□□□□□ -0.4
COL13A1-207ENST00000478219 RBM10P98175 930 aaKnown RBP12.57□□□□□ -0.4
COL13A1-207ENST00000478219 CCDC146Q8IYE0 955 aa12.57□□□□□ -0.4
COL13A1-207ENST00000478219 PANK1Q8TE04 598 aa12.57□□□□□ -0.4
COL13A1-207ENST00000478219 ERCC6Q03468 1493 aa12.57□□□□□ -0.4
COL13A1-207ENST00000478219 KIAA1211Q6ZU35 1233 aa12.56□□□□□ -0.4
COL13A1-207ENST00000478219 COG6Q9Y2V7 657 aa12.56□□□□□ -0.4
COL13A1-207ENST00000478219 RIPK4P57078 832 aa12.55□□□□□ -0.4
COL13A1-207ENST00000478219 TAOK2Q9UL54 1235 aa12.55□□□□□ -0.4
COL13A1-207ENST00000478219 TPM2P07951 284 aa12.54□□□□□ -0.4
COL13A1-207ENST00000478219 ADAMTS12P58397 1594 aa12.54□□□□□ -0.4
COL13A1-207ENST00000478219 TRMT2AQ8IZ69 625 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms