RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 PTPREP23469 700 aa6.36□□□□□ -1.39
FNDC3B-209ENST00000478016 PBX2P40425 430 aa6.36□□□□□ -1.39
FNDC3B-209ENST00000478016 C6orf132Q5T0Z8 1188 aa6.36□□□□□ -1.39
FNDC3B-209ENST00000478016 POTEBQ6S5H4 581 aa6.36□□□□□ -1.39
FNDC3B-209ENST00000478016 ZNF687Q8N1G0 1237 aa6.36□□□□□ -1.39
FNDC3B-209ENST00000478016 TSR1Q2NL82 804 aaKnown RBP6.35□□□□□ -1.39
FNDC3B-209ENST00000478016 GPIHBP1Q8IV16 184 aa6.35□□□□□ -1.39
FNDC3B-209ENST00000478016 POTEMA6NI47 508 aa6.34□□□□□ -1.39
FNDC3B-209ENST00000478016 ARHGAP33O14559 1287 aa6.34□□□□□ -1.39
FNDC3B-209ENST00000478016 POTEGQ6S5H5 508 aa6.34□□□□□ -1.39
FNDC3B-209ENST00000478016 CERKQ8TCT0 537 aa6.34□□□□□ -1.39
FNDC3B-209ENST00000478016 KCNK17Q96T54 332 aa6.34□□□□□ -1.39
FNDC3B-209ENST00000478016 FCHSD2O94868 740 aa6.33□□□□□ -1.4
FNDC3B-209ENST00000478016 CDHR5Q9HBB8 845 aa6.33□□□□□ -1.4
FNDC3B-209ENST00000478016 PPP1R3GB7ZBB8 358 aa6.32□□□□□ -1.4
FNDC3B-209ENST00000478016 PTGDRQ13258 359 aa6.32□□□□□ -1.4
FNDC3B-209ENST00000478016 HIC1Q14526 733 aa6.31□□□□□ -1.4
FNDC3B-209ENST00000478016 POTEEQ6S8J3 1075 aa6.31□□□□□ -1.4
FNDC3B-209ENST00000478016 NPDC1Q9NQX5 325 aaPredicted RBP6.31□□□□□ -1.4
FNDC3B-209ENST00000478016 AXIN2Q9Y2T1 843 aa6.31□□□□□ -1.4
FNDC3B-209ENST00000478016 GPR37O15354 613 aa6.3□□□□□ -1.4
FNDC3B-209ENST00000478016 COL9A1P20849 921 aa6.3□□□□□ -1.4
FNDC3B-209ENST00000478016 PSEN2P49810 448 aa6.3□□□□□ -1.4
FNDC3B-209ENST00000478016 ZC3H15Q8WU90 426 aaKnown RBP6.3□□□□□ -1.4
FNDC3B-209ENST00000478016 GNPATO15228 680 aa6.29□□□□□ -1.4
FNDC3B-209ENST00000478016 RBM27Q9P2N5 1060 aaKnown RBP6.29□□□□□ -1.4
FNDC3B-209ENST00000478016 PRSS12P56730 875 aa6.28□□□□□ -1.4
FNDC3B-209ENST00000478016 LSM11P83369 360 aaKnown RBP eCLIP6.28□□□□□ -1.42e-12■■■■■ 35
FNDC3B-209ENST00000478016 DMRTA1Q5VZB9 504 aa6.28□□□□□ -1.4
FNDC3B-209ENST00000478016 CDAN1Q8IWY9 1227 aa6.28□□□□□ -1.4
FNDC3B-209ENST00000478016 CDCA7LQ96GN5 454 aa6.28□□□□□ -1.4
FNDC3B-209ENST00000478016 ZBED2Q9BTP6 218 aa6.28□□□□□ -1.4
FNDC3B-209ENST00000478016 SLC4A5Q9BY07 1137 aa6.28□□□□□ -1.4
FNDC3B-209ENST00000478016 ZMYND10O75800 440 aa6.27□□□□□ -1.41
FNDC3B-209ENST00000478016 TPRNQ4KMQ1 711 aa6.27□□□□□ -1.41
FNDC3B-209ENST00000478016 TRIM6-TRIM34B2RNG4 842 aa6.26□□□□□ -1.41
FNDC3B-209ENST00000478016 TK2O00142 265 aa6.26□□□□□ -1.41
FNDC3B-209ENST00000478016 ONECUT3O60422 494 aaPredicted RBP6.26□□□□□ -1.41
FNDC3B-209ENST00000478016 PADI6Q6TGC4 694 aa6.26□□□□□ -1.41
FNDC3B-209ENST00000478016 ARXQ96QS3 562 aa6.26□□□□□ -1.41
FNDC3B-209ENST00000478016 MAP2K5Q13163 448 aa6.25□□□□□ -1.41
FNDC3B-209ENST00000478016 PROX2Q3B8N5 592 aa6.25□□□□□ -1.41
FNDC3B-209ENST00000478016 BARGINQ6ZT62 677 aa6.25□□□□□ -1.41
FNDC3B-209ENST00000478016 TTC13Q8NBP0 860 aa6.25□□□□□ -1.41
FNDC3B-209ENST00000478016 KRTAP3-3Q9BYR6 98 aa6.25□□□□□ -1.41
FNDC3B-209ENST00000478016 KRTAP3-2Q9BYR7 98 aa6.25□□□□□ -1.41
FNDC3B-209ENST00000478016 VPS9D1Q9Y2B5 631 aa6.25□□□□□ -1.41
FNDC3B-209ENST00000478016 ADGRD1Q6QNK2 874 aa6.24□□□□□ -1.41
FNDC3B-209ENST00000478016 ANKRD13DQ6ZTN6 518 aa6.24□□□□□ -1.41
FNDC3B-209ENST00000478016 PACS2Q86VP3 889 aa6.24□□□□□ -1.41
FNDC3B-209ENST00000478016 PCDH10Q9P2E7 1040 aa6.24□□□□□ -1.41
FNDC3B-209ENST00000478016 TSKSQ9UJT2 592 aa6.24□□□□□ -1.41
FNDC3B-209ENST00000478016 NBPF26B4DH59 902 aa6.23□□□□□ -1.41
FNDC3B-209ENST00000478016 FECHP22830 423 aa6.23□□□□□ -1.41
FNDC3B-209ENST00000478016 ERICH6Q7L0X2 663 aa6.23□□□□□ -1.41
FNDC3B-209ENST00000478016 KRI1Q8N9T8 703 aaKnown RBP6.23□□□□□ -1.41
FNDC3B-209ENST00000478016 KIAA1468Q9P260 1216 aa6.23□□□□□ -1.41
FNDC3B-209ENST00000478016 RABGEF1Q9UJ41 708 aa6.23□□□□□ -1.41
FNDC3B-209ENST00000478016 MINK1Q8N4C8 1332 aaPredicted RBP6.23□□□□□ -1.41
FNDC3B-209ENST00000478016 NBPF3Q9H094 633 aa6.22□□□□□ -1.41
FNDC3B-209ENST00000478016 FAM198AQ9UFP1 575 aa6.22□□□□□ -1.41
FNDC3B-209ENST00000478016 IRF6O14896 467 aa6.21□□□□□ -1.42
FNDC3B-209ENST00000478016 OATP04181 439 aa6.21□□□□□ -1.42
FNDC3B-209ENST00000478016 ADGRG1Q9Y653 693 aa6.21□□□□□ -1.42
FNDC3B-209ENST00000478016 RBM46Q8TBY0 533 aaKnown RBP6.2□□□□□ -1.42
FNDC3B-209ENST00000478016 TATDN2Q93075 761 aa6.2□□□□□ -1.42
FNDC3B-209ENST00000478016 PNMA3Q9UL41 463 aa6.2□□□□□ -1.42
FNDC3B-209ENST00000478016 BHMG1C9JSJ3 638 aaPredicted RBP6.19□□□□□ -1.42
FNDC3B-209ENST00000478016 HRO43593 1189 aa6.19□□□□□ -1.42
FNDC3B-209ENST00000478016 PRKCSHP14314 528 aaPredicted RBP6.19□□□□□ -1.42
FNDC3B-209ENST00000478016 FAM161AQ3B820 660 aa6.19□□□□□ -1.42
FNDC3B-209ENST00000478016 NUDT18Q6ZVK8 323 aa6.19□□□□□ -1.42
FNDC3B-209ENST00000478016 CCDC102AQ96A19 550 aa6.19□□□□□ -1.42
FNDC3B-209ENST00000478016 AK7Q96M32 723 aa6.19□□□□□ -1.42
FNDC3B-209ENST00000478016 STAC3Q96MF2 364 aa6.19□□□□□ -1.42
FNDC3B-209ENST00000478016 SLC24A3Q9HC58 644 aa6.19□□□□□ -1.42
FNDC3B-209ENST00000478016 METTL3Q86U44 580 aaKnown RBP6.18□□□□□ -1.42
FNDC3B-209ENST00000478016 LAPTM4BQ86VI4 370 aa6.18□□□□□ -1.42
FNDC3B-209ENST00000478016 MRPL50Q8N5N7 158 aaKnown RBP6.18□□□□□ -1.42
FNDC3B-209ENST00000478016 EYA1Q99502 592 aa6.18□□□□□ -1.42
FNDC3B-209ENST00000478016 SEPT9Q9UHD8 586 aaPredicted RBP6.18□□□□□ -1.42
FNDC3B-209ENST00000478016 C3orf80F5H4A9 247 aa6.17□□□□□ -1.42
FNDC3B-209ENST00000478016 SMAPO00193 183 aa6.17□□□□□ -1.42
FNDC3B-209ENST00000478016 FAM98CQ17RN3 349 aaKnown RBP6.17□□□□□ -1.42
FNDC3B-209ENST00000478016 PXYLP1Q8TE99 480 aa6.17□□□□□ -1.42
FNDC3B-209ENST00000478016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.15□□□□□ -1.42
FNDC3B-209ENST00000478016 RCCD1A6NED2 376 aa6.15□□□□□ -1.42
FNDC3B-209ENST00000478016 GOLGA8CPA6NN73 597 aa6.15□□□□□ -1.42
FNDC3B-209ENST00000478016 DNAJB2P25686 324 aa6.15□□□□□ -1.42
FNDC3B-209ENST00000478016 TRIM66O15016 1216 aa6.14□□□□□ -1.43
FNDC3B-209ENST00000478016 PHOX2BQ99453 314 aa6.14□□□□□ -1.43
FNDC3B-209ENST00000478016 HDGFP51858 240 aaKnown RBP6.13□□□□□ -1.43
FNDC3B-209ENST00000478016 AMHR2Q16671 573 aa6.13□□□□□ -1.43
FNDC3B-209ENST00000478016 ZFRQ96KR1 1074 aaKnown RBP6.13□□□□□ -1.43
FNDC3B-209ENST00000478016 TMEM134Q9H6X4 195 aa6.13□□□□□ -1.43
FNDC3B-209ENST00000478016 ANKK1Q8NFD2 765 aa6.12□□□□□ -1.43
FNDC3B-209ENST00000478016 CLCN1P35523 988 aa6.11□□□□□ -1.43
FNDC3B-209ENST00000478016 SLC4A3P48751 1232 aa6.11□□□□□ -1.43
FNDC3B-209ENST00000478016 MDM2Q00987 491 aaPredicted RBP6.11□□□□□ -1.43
FNDC3B-209ENST00000478016 PDE4DQ08499 809 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms