RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 GRXCR2A6NFK2 248 aa10.84□□□□□ -0.67
SMNDC1-205ENST00000477763 TULP1O00294 542 aaPredicted RBP10.83□□□□□ -0.68
SMNDC1-205ENST00000477763 ZDHHC16Q969W1 377 aa10.83□□□□□ -0.68
SMNDC1-205ENST00000477763 OSBPP22059 807 aa10.82□□□□□ -0.68
SMNDC1-205ENST00000477763 EN1Q05925 392 aaPredicted RBP10.8□□□□□ -0.68
SMNDC1-205ENST00000477763 BCL2L12Q9HB09 334 aa10.8□□□□□ -0.68
SMNDC1-205ENST00000477763 ARHGAP33O14559 1287 aa10.79□□□□□ -0.68
SMNDC1-205ENST00000477763 ADAM33Q9BZ11 813 aa10.78□□□□□ -0.68
SMNDC1-205ENST00000477763 DMRTA1Q5VZB9 504 aa10.76□□□□□ -0.69
SMNDC1-205ENST00000477763 PRIM1P49642 420 aaKnown RBP10.75□□□□□ -0.69
SMNDC1-205ENST00000477763 PSEN2P49810 448 aa10.75□□□□□ -0.69
SMNDC1-205ENST00000477763 ADGRD1Q6QNK2 874 aa10.75□□□□□ -0.69
SMNDC1-205ENST00000477763 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMNDC1-205ENST00000477763 MAP3K7O43318 606 aa10.74□□□□□ -0.69
SMNDC1-205ENST00000477763 PTPREP23469 700 aa10.74□□□□□ -0.69
SMNDC1-205ENST00000477763 C6orf132Q5T0Z8 1188 aa10.74□□□□□ -0.69
SMNDC1-205ENST00000477763 RBM33Q96EV2 1170 aaKnown RBP10.73□□□□□ -0.69
SMNDC1-205ENST00000477763 KCNH8Q96L42 1107 aa10.73□□□□□ -0.69
SMNDC1-205ENST00000477763 RBM26Q5T8P6 1007 aaKnown RBP10.71□□□□□ -0.69
SMNDC1-205ENST00000477763 TK2O00142 265 aa10.7□□□□□ -0.7
SMNDC1-205ENST00000477763 HRO43593 1189 aa10.7□□□□□ -0.7
SMNDC1-205ENST00000477763 LMOD2Q6P5Q4 547 aa10.7□□□□□ -0.7
SMNDC1-205ENST00000477763 CERKQ8TCT0 537 aa10.7□□□□□ -0.7
SMNDC1-205ENST00000477763 PPP1R3GB7ZBB8 358 aa10.69□□□□□ -0.7
SMNDC1-205ENST00000477763 TSR1Q2NL82 804 aaKnown RBP10.69□□□□□ -0.7
SMNDC1-205ENST00000477763 KCNK17Q96T54 332 aa10.69□□□□□ -0.7
SMNDC1-205ENST00000477763 NUTM2FA1L443 756 aa10.67□□□□□ -0.7
SMNDC1-205ENST00000477763 GPIHBP1Q8IV16 184 aa10.66□□□□□ -0.7
SMNDC1-205ENST00000477763 SLC4A5Q9BY07 1137 aa10.66□□□□□ -0.7
SMNDC1-205ENST00000477763 CDHR5Q9HBB8 845 aa10.66□□□□□ -0.7
SMNDC1-205ENST00000477763 FCHSD2O94868 740 aa10.65□□□□□ -0.7
SMNDC1-205ENST00000477763 COL9A1P20849 921 aa10.65□□□□□ -0.7
SMNDC1-205ENST00000477763 PTGDRQ13258 359 aa10.65□□□□□ -0.7
SMNDC1-205ENST00000477763 NPDC1Q9NQX5 325 aaPredicted RBP10.65□□□□□ -0.7
SMNDC1-205ENST00000477763 RBM27Q9P2N5 1060 aaKnown RBP10.63□□□□□ -0.71
SMNDC1-205ENST00000477763 GPR37O15354 613 aa10.62□□□□□ -0.71
SMNDC1-205ENST00000477763 ZBED2Q9BTP6 218 aa10.62□□□□□ -0.71
SMNDC1-205ENST00000477763 ONECUT3O60422 494 aaPredicted RBP10.61□□□□□ -0.71
SMNDC1-205ENST00000477763 HIC1Q14526 733 aa10.61□□□□□ -0.71
SMNDC1-205ENST00000477763 HCSTQ9UBK5 93 aa10.61□□□□□ -0.71
SMNDC1-205ENST00000477763 PRSS12P56730 875 aa10.6□□□□□ -0.71
SMNDC1-205ENST00000477763 VPS9D1Q9Y2B5 631 aa10.6□□□□□ -0.71
SMNDC1-205ENST00000477763 CDCA7LQ96GN5 454 aa10.58□□□□□ -0.72
SMNDC1-205ENST00000477763 TRIM6-TRIM34B2RNG4 842 aa10.57□□□□□ -0.72
SMNDC1-205ENST00000477763 GNPATO15228 680 aa10.57□□□□□ -0.72
SMNDC1-205ENST00000477763 TTC13Q8NBP0 860 aa10.57□□□□□ -0.72
SMNDC1-205ENST00000477763 ZC3H15Q8WU90 426 aaKnown RBP10.57□□□□□ -0.72
SMNDC1-205ENST00000477763 KCTD12Q96CX2 325 aaKnown RBP10.56□□□□□ -0.72
SMNDC1-205ENST00000477763 PLA2G2EQ9NZK7 142 aa10.55□□□□□ -0.72
SMNDC1-205ENST00000477763 PROX2Q3B8N5 592 aa10.54□□□□□ -0.72
SMNDC1-205ENST00000477763 PADI6Q6TGC4 694 aa10.54□□□□□ -0.72
SMNDC1-205ENST00000477763 RABGEF1Q9UJ41 708 aa10.54□□□□□ -0.72
SMNDC1-205ENST00000477763 BHMG1C9JSJ3 638 aaPredicted RBP10.53□□□□□ -0.72
SMNDC1-205ENST00000477763 ZMYND10O75800 440 aa10.53□□□□□ -0.72
SMNDC1-205ENST00000477763 PACS2Q86VP3 889 aa10.53□□□□□ -0.72
SMNDC1-205ENST00000477763 TSKSQ9UJT2 592 aa10.53□□□□□ -0.72
SMNDC1-205ENST00000477763 BARGINQ6ZT62 677 aa10.51□□□□□ -0.73
SMNDC1-205ENST00000477763 STAC3Q96MF2 364 aa10.51□□□□□ -0.73
SMNDC1-205ENST00000477763 FAM198AQ9UFP1 575 aa10.51□□□□□ -0.73
SMNDC1-205ENST00000477763 KIAA1468Q9P260 1216 aa10.5□□□□□ -0.73
SMNDC1-205ENST00000477763 NBPF26B4DH59 902 aa10.49□□□□□ -0.73
SMNDC1-205ENST00000477763 FECHP22830 423 aa10.49□□□□□ -0.73
SMNDC1-205ENST00000477763 MAP2K5Q13163 448 aa10.49□□□□□ -0.73
SMNDC1-205ENST00000477763 NBPF3Q9H094 633 aa10.49□□□□□ -0.73
SMNDC1-205ENST00000477763 MINK1Q8N4C8 1332 aaPredicted RBP10.48□□□□□ -0.73
SMNDC1-205ENST00000477763 LAPTM4BQ86VI4 370 aa10.47□□□□□ -0.73
SMNDC1-205ENST00000477763 ADGRG1Q9Y653 693 aa10.47□□□□□ -0.73
SMNDC1-205ENST00000477763 TATDN2Q93075 761 aa10.46□□□□□ -0.73
SMNDC1-205ENST00000477763 OATP04181 439 aa10.45□□□□□ -0.74
SMNDC1-205ENST00000477763 PTPN5P54829 565 aa10.45□□□□□ -0.74
SMNDC1-205ENST00000477763 IRF6O14896 467 aa10.44□□□□□ -0.74
SMNDC1-205ENST00000477763 NUDT18Q6ZVK8 323 aa10.44□□□□□ -0.74
SMNDC1-205ENST00000477763 MRPL50Q8N5N7 158 aaKnown RBP10.44□□□□□ -0.74
SMNDC1-205ENST00000477763 RBM46Q8TBY0 533 aaKnown RBP10.44□□□□□ -0.74
SMNDC1-205ENST00000477763 PNMA3Q9UL41 463 aa10.44□□□□□ -0.74
SMNDC1-205ENST00000477763 FAM98CQ17RN3 349 aaKnown RBP10.43□□□□□ -0.74
SMNDC1-205ENST00000477763 EYA1Q99502 592 aa10.43□□□□□ -0.74
SMNDC1-205ENST00000477763 C3orf80F5H4A9 247 aa10.42□□□□□ -0.74
SMNDC1-205ENST00000477763 THSD4Q6ZMP0 1018 aa10.42□□□□□ -0.74
SMNDC1-205ENST00000477763 KRI1Q8N9T8 703 aaKnown RBP10.42□□□□□ -0.74
SMNDC1-205ENST00000477763 TPRNQ4KMQ1 711 aa10.41□□□□□ -0.74
SMNDC1-205ENST00000477763 METTL3Q86U44 580 aaKnown RBP10.41□□□□□ -0.74
SMNDC1-205ENST00000477763 PXYLP1Q8TE99 480 aa10.41□□□□□ -0.74
SMNDC1-205ENST00000477763 CCDC102AQ96A19 550 aa10.4□□□□□ -0.74
SMNDC1-205ENST00000477763 SEPT9Q9UHD8 586 aaPredicted RBP10.4□□□□□ -0.74
SMNDC1-205ENST00000477763 SMAPO00193 183 aa10.39□□□□□ -0.75
SMNDC1-205ENST00000477763 WNT2BQ93097 391 aa10.39□□□□□ -0.75
SMNDC1-205ENST00000477763 FAM161AQ3B820 660 aa10.38□□□□□ -0.75
SMNDC1-205ENST00000477763 AK7Q96M32 723 aa10.38□□□□□ -0.75
SMNDC1-205ENST00000477763 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.37□□□□□ -0.75
SMNDC1-205ENST00000477763 DNAJB2P25686 324 aa10.37□□□□□ -0.75
SMNDC1-205ENST00000477763 ZFRQ96KR1 1074 aaKnown RBP10.37□□□□□ -0.75
SMNDC1-205ENST00000477763 GOLGA8CPA6NN73 597 aa10.36□□□□□ -0.75
SMNDC1-205ENST00000477763 PRKCSHP14314 528 aaPredicted RBP10.36□□□□□ -0.75
SMNDC1-205ENST00000477763 RCCD1A6NED2 376 aa10.35□□□□□ -0.75
SMNDC1-205ENST00000477763 SLC24A3Q9HC58 644 aa10.35□□□□□ -0.75
SMNDC1-205ENST00000477763 TMEM134Q9H6X4 195 aa10.34□□□□□ -0.75
SMNDC1-205ENST00000477763 ANKK1Q8NFD2 765 aa10.33□□□□□ -0.76
SMNDC1-205ENST00000477763 PHOX2BQ99453 314 aa10.33□□□□□ -0.76
SMNDC1-205ENST00000477763 HDGFP51858 240 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms