RNA–Protein interactions for RNA: ENST00000477703.5

SMIM4-203, Transcript of small integral membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM4, Length 1,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-203ENST00000477703 SPATA31E1Q6ZUB1 1445 aa27.24■■□□□ 1.95
SMIM4-203ENST00000477703 ATP10AO60312 1499 aa27.23■■□□□ 1.95
SMIM4-203ENST00000477703 ZNF518AQ6AHZ1 1483 aa27.23■■□□□ 1.95
SMIM4-203ENST00000477703 DHX29Q7Z478 1369 aaKnown RBP27.23■■□□□ 1.95
SMIM4-203ENST00000477703 CCDC144AA2RUR9 1427 aa27.21■■□□□ 1.95
SMIM4-203ENST00000477703 KDM5CP41229 1560 aa27.2■■□□□ 1.94
SMIM4-203ENST00000477703 EIF2AK4Q9P2K8 1649 aaKnown RBP27.19■■□□□ 1.94
SMIM4-203ENST00000477703 CENPBP07199 599 aaPredicted RBP27.18■■□□□ 1.94
SMIM4-203ENST00000477703 POGZQ7Z3K3 1410 aa27.18■■□□□ 1.94
SMIM4-203ENST00000477703 VWDEQ8N2E2 1590 aa27.18■■□□□ 1.94
SMIM4-203ENST00000477703 WASHC2AQ641Q2 1341 aa27.18■■□□□ 1.94
SMIM4-203ENST00000477703 E9PCH4 1651 aa27.17■■□□□ 1.94
SMIM4-203ENST00000477703 YTHDC1Q96MU7 727 aaKnown RBP27.17■■□□□ 1.94
SMIM4-203ENST00000477703 NEO1Q92859 1461 aa27.16■■□□□ 1.94
SMIM4-203ENST00000477703 MYT1LQ9UL68 1186 aa27.16■■□□□ 1.94
SMIM4-203ENST00000477703 MAP3K4Q9Y6R4 1608 aa27.15■■□□□ 1.94
SMIM4-203ENST00000477703 MLH3Q9UHC1 1453 aa27.14■■□□□ 1.94
SMIM4-203ENST00000477703 C11orf95C9JLR9 678 aaPredicted RBP27.14■■□□□ 1.93
SMIM4-203ENST00000477703 GLI2P10070 1586 aa27.13■■□□□ 1.93
SMIM4-203ENST00000477703 MROH1Q8NDA8 1641 aa27.13■■□□□ 1.93
SMIM4-203ENST00000477703 KIF3BO15066 747 aa27.13■■□□□ 1.93
SMIM4-203ENST00000477703 DCAF11Q8TEB1 546 aa27.13■■□□□ 1.93
SMIM4-203ENST00000477703 ZNF326Q5BKZ1 582 aaKnown RBP27.12■■□□□ 1.93
SMIM4-203ENST00000477703 RALGAPBQ86X10 1494 aa27.12■■□□□ 1.93
SMIM4-203ENST00000477703 TET3O43151 1660 aa27.11■■□□□ 1.93
SMIM4-203ENST00000477703 KDM2AQ9Y2K7 1162 aa27.11■■□□□ 1.93
SMIM4-203ENST00000477703 PRDM15P57071 1507 aaPredicted RBP27.1■■□□□ 1.93
SMIM4-203ENST00000477703 HECW2Q9P2P5 1572 aa27.08■■□□□ 1.93
SMIM4-203ENST00000477703 A2MP01023 1474 aa27.08■■□□□ 1.93
SMIM4-203ENST00000477703 PTPRTO14522 1441 aa27.08■■□□□ 1.93
SMIM4-203ENST00000477703 POLR1AO95602 1720 aaPredicted RBP27.07■■□□□ 1.92
SMIM4-203ENST00000477703 KANK1Q14678 1352 aa27.07■■□□□ 1.92
SMIM4-203ENST00000477703 CCDC7Q96M83 1385 aa27.06■■□□□ 1.92
SMIM4-203ENST00000477703 RGL3Q3MIN7 710 aa27.05■■□□□ 1.92
SMIM4-203ENST00000477703 SPHKAPQ2M3C7 1700 aa27.05■■□□□ 1.92
SMIM4-203ENST00000477703 USP47Q96K76 1375 aa27.05■■□□□ 1.92
SMIM4-203ENST00000477703 FRMPD1Q5SYB0 1578 aa27.05■■□□□ 1.92
SMIM4-203ENST00000477703 PRAG1Q86YV5 1406 aa27.04■■□□□ 1.92
SMIM4-203ENST00000477703 TRPM2O94759 1503 aa27.04■■□□□ 1.92
SMIM4-203ENST00000477703 RAPGEF3O95398 923 aa27.03■■□□□ 1.92
SMIM4-203ENST00000477703 RNF17Q9BXT8 1623 aaKnown RBP27.02■■□□□ 1.92
SMIM4-203ENST00000477703 ANP32CO43423 234 aa27.02■■□□□ 1.92
SMIM4-203ENST00000477703 RICTORQ6R327 1708 aa27.01■■□□□ 1.91
SMIM4-203ENST00000477703 ABCA6Q8N139 1617 aa27.01■■□□□ 1.91
SMIM4-203ENST00000477703 TRPM1Q7Z4N2 1603 aa27.01■■□□□ 1.91
SMIM4-203ENST00000477703 BCORL1Q5H9F3 1711 aa27■■□□□ 1.91
SMIM4-203ENST00000477703 DIP2BQ9P265 1576 aa27■■□□□ 1.91
SMIM4-203ENST00000477703 CARD11Q9BXL7 1154 aa26.99■■□□□ 1.91
SMIM4-203ENST00000477703 KIF7Q2M1P5 1343 aa26.98■■□□□ 1.91
SMIM4-203ENST00000477703 SCAF1Q9H7N4 1312 aaKnown RBP26.98■■□□□ 1.91
SMIM4-203ENST00000477703 LMTK2Q8IWU2 1503 aa26.98■■□□□ 1.91
SMIM4-203ENST00000477703 CEP152O94986 1710 aa26.98■■□□□ 1.91
SMIM4-203ENST00000477703 CLTCL1P53675 1640 aa26.97■■□□□ 1.91
SMIM4-203ENST00000477703 FAM69CQ0P6D2 419 aa26.97■■□□□ 1.91
SMIM4-203ENST00000477703 CCER2I3L3R5 266 aa26.96■■□□□ 1.91
SMIM4-203ENST00000477703 CNTLNQ9NXG0 1405 aa26.95■■□□□ 1.91
SMIM4-203ENST00000477703 EFCAB6Q5THR3 1501 aa26.94■■□□□ 1.9
SMIM4-203ENST00000477703 PPRC1Q5VV67 1664 aaKnown RBP26.93■■□□□ 1.9
SMIM4-203ENST00000477703 DIP2CQ9Y2E4 1556 aa26.92■■□□□ 1.9
SMIM4-203ENST00000477703 ROCK2O75116 1388 aaKnown RBP26.92■■□□□ 1.9
SMIM4-203ENST00000477703 GPRASP1Q5JY77 1395 aa26.91■■□□□ 1.9
SMIM4-203ENST00000477703 NBPF1Q3BBV0 1214 aa26.89■■□□□ 1.9
SMIM4-203ENST00000477703 DNAJC5Q9H3Z4 198 aa26.89■■□□□ 1.89
SMIM4-203ENST00000477703 LAMC1P11047 1609 aa26.87■■□□□ 1.89
SMIM4-203ENST00000477703 NEURL4Q96JN8 1562 aa26.87■■□□□ 1.89
SMIM4-203ENST00000477703 ARID4BQ4LE39 1312 aaPredicted RBP26.87■■□□□ 1.89
SMIM4-203ENST00000477703 ST20-MTHFSA0A0A6YYL1 179 aa26.86■■□□□ 1.89
SMIM4-203ENST00000477703 TSPOAP1O95153 1857 aa26.86■■□□□ 1.89
SMIM4-203ENST00000477703 GGT6Q6P531 493 aa26.85■■□□□ 1.89
SMIM4-203ENST00000477703 YEATS2Q9ULM3 1422 aa26.84■■□□□ 1.89
SMIM4-203ENST00000477703 UGGT1Q9NYU2 1555 aa26.82■■□□□ 1.88
SMIM4-203ENST00000477703 STAC3Q96MF2 364 aa26.82■■□□□ 1.88
SMIM4-203ENST00000477703 MADDQ8WXG6 1647 aa26.82■■□□□ 1.88
SMIM4-203ENST00000477703 ABCC3O15438 1527 aa26.81■■□□□ 1.88
SMIM4-203ENST00000477703 ZMYM4Q5VZL5 1548 aa26.81■■□□□ 1.88
SMIM4-203ENST00000477703 NPATQ14207 1427 aa26.8■■□□□ 1.88
SMIM4-203ENST00000477703 KIF1BO60333 1816 aa26.8■■□□□ 1.88
SMIM4-203ENST00000477703 CFAP65Q6ZU64 1925 aaKnown RBP26.79■■□□□ 1.88
SMIM4-203ENST00000477703 KIF13AQ9H1H9 1805 aa26.77■■□□□ 1.88
SMIM4-203ENST00000477703 WASHC2CQ9Y4E1 1318 aa26.76■■□□□ 1.87
SMIM4-203ENST00000477703 GTF3C3Q9Y5Q9 886 aa26.75■■□□□ 1.87
SMIM4-203ENST00000477703 CAMSAP1Q5T5Y3 1602 aa26.74■■□□□ 1.87
SMIM4-203ENST00000477703 PRKRIP1Q9H875 184 aaPredicted RBP26.74■■□□□ 1.87
SMIM4-203ENST00000477703 MROH2AA6NES4 1674 aa26.73■■□□□ 1.87
SMIM4-203ENST00000477703 IFT172Q9UG01 1749 aa26.71■■□□□ 1.87
SMIM4-203ENST00000477703 SIGLEC1Q9BZZ2 1709 aa26.71■■□□□ 1.87
SMIM4-203ENST00000477703 TESK2Q96S53 571 aa26.69■■□□□ 1.86
SMIM4-203ENST00000477703 POLR3GLQ9BT43 218 aa26.69■■□□□ 1.86
SMIM4-203ENST00000477703 NOS1P29475 1434 aa26.68■■□□□ 1.86
SMIM4-203ENST00000477703 ZC3H13Q5T200 1668 aaKnown RBP26.68■■□□□ 1.86
SMIM4-203ENST00000477703 ADGRB3O60242 1522 aa26.68■■□□□ 1.86
SMIM4-203ENST00000477703 MYOM2P54296 1465 aa26.67■■□□□ 1.86
SMIM4-203ENST00000477703 KIAA1210Q9ULL0 1709 aa26.67■■□□□ 1.86
SMIM4-203ENST00000477703 ARHGAP31Q2M1Z3 1444 aa26.67■■□□□ 1.86
SMIM4-203ENST00000477703 IQGAP1P46940 1657 aa26.67■■□□□ 1.86
SMIM4-203ENST00000477703 REREQ9P2R6 1566 aa26.63■■□□□ 1.85
SMIM4-203ENST00000477703 ADGRF5Q8IZF2 1346 aa26.63■■□□□ 1.85
SMIM4-203ENST00000477703 COL17A1Q9UMD9 1497 aaPredicted RBP26.62■■□□□ 1.85
SMIM4-203ENST00000477703 CCDC184Q52MB2 194 aa26.62■■□□□ 1.85
SMIM4-203ENST00000477703 PIK3C2BO00750 1634 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms