RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 PROX2Q3B8N5 592 aa7.11□□□□□ -1.27
CACUL1-202ENST00000477583 BBXQ8WY36 941 aaPredicted RBP7.11□□□□□ -1.27
CACUL1-202ENST00000477583 RTN4Q9NQC3 1192 aaKnown RBP7.11□□□□□ -1.27
CACUL1-202ENST00000477583 EPAS1Q99814 870 aa7.1□□□□□ -1.27
CACUL1-202ENST00000477583 AMER1Q5JTC6 1135 aaPredicted RBP7.09□□□□□ -1.27
CACUL1-202ENST00000477583 IFFO2Q5TF58 517 aa7.08□□□□□ -1.28
CACUL1-202ENST00000477583 ANKK1Q8NFD2 765 aa7.08□□□□□ -1.28
CACUL1-202ENST00000477583 C6orf132Q5T0Z8 1188 aa7.07□□□□□ -1.28
CACUL1-202ENST00000477583 LAPTM4BQ86VI4 370 aa7.06□□□□□ -1.28
CACUL1-202ENST00000477583 RBM33Q96EV2 1170 aaKnown RBP7.06□□□□□ -1.28
CACUL1-202ENST00000477583 KIAA1468Q9P260 1216 aa7.06□□□□□ -1.28
CACUL1-202ENST00000477583 ONECUT3O60422 494 aaPredicted RBP7.05□□□□□ -1.28
CACUL1-202ENST00000477583 BCAMP50895 628 aa7.05□□□□□ -1.28
CACUL1-202ENST00000477583 DDX12PQ92771 950 aa7.05□□□□□ -1.28
CACUL1-202ENST00000477583 SPRYD3Q8NCJ5 442 aa7.04□□□□□ -1.28
CACUL1-202ENST00000477583 ZFRQ96KR1 1074 aaKnown RBP7.04□□□□□ -1.28
CACUL1-202ENST00000477583 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.04□□□□□ -1.28
CACUL1-202ENST00000477583 A0A0G2JS52 829 aa7.03□□□□□ -1.28
CACUL1-202ENST00000477583 SOWAHBA6NEL2 793 aa7.03□□□□□ -1.28
CACUL1-202ENST00000477583 TRIM6-TRIM34B2RNG4 842 aa7.03□□□□□ -1.28
CACUL1-202ENST00000477583 RGS20O76081 388 aa7.03□□□□□ -1.28
CACUL1-202ENST00000477583 NBR1Q14596 966 aa7.03□□□□□ -1.28
CACUL1-202ENST00000477583 PDIA6Q15084 440 aa7.03□□□□□ -1.28
CACUL1-202ENST00000477583 SEPT9Q9UHD8 586 aaPredicted RBP7.03□□□□□ -1.28
CACUL1-202ENST00000477583 MAP3K7O43318 606 aa7.01□□□□□ -1.29
CACUL1-202ENST00000477583 EN1Q05925 392 aaPredicted RBP7.01□□□□□ -1.29
CACUL1-202ENST00000477583 SPDYE16A6NNV3 312 aaPredicted RBP7□□□□□ -1.29
CACUL1-202ENST00000477583 ITGBL1O95965 494 aaPredicted RBP7□□□□□ -1.29
CACUL1-202ENST00000477583 FAM98CQ17RN3 349 aaKnown RBP7□□□□□ -1.29
CACUL1-202ENST00000477583 NYAP1Q6ZVC0 841 aa7□□□□□ -1.29
CACUL1-202ENST00000477583 E2F4Q16254 413 aa6.99□□□□□ -1.29
CACUL1-202ENST00000477583 TSR1Q2NL82 804 aaKnown RBP6.99□□□□□ -1.29
CACUL1-202ENST00000477583 WBP1LQ9NX94 342 aa6.99□□□□□ -1.29
CACUL1-202ENST00000477583 LRCH3Q96II8 777 aa6.98□□□□□ -1.29
CACUL1-202ENST00000477583 CFAP44Q96MT7 982 aa6.98□□□□□ -1.29
CACUL1-202ENST00000477583 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.98□□□□□ -1.29
CACUL1-202ENST00000477583 PAXIP1Q6ZW49 1069 aaPredicted RBP6.97□□□□□ -1.29
CACUL1-202ENST00000477583 PACS2Q86VP3 889 aa6.97□□□□□ -1.29
CACUL1-202ENST00000477583 WDR70Q9NW82 654 aa6.97□□□□□ -1.29
CACUL1-202ENST00000477583 TSKSQ9UJT2 592 aa6.97□□□□□ -1.29
CACUL1-202ENST00000477583 HPS5Q9UPZ3 1129 aa6.97□□□□□ -1.29
CACUL1-202ENST00000477583 IRX2Q9BZI1 471 aaPredicted RBP6.96□□□□□ -1.3
CACUL1-202ENST00000477583 TSR3Q9UJK0 312 aaKnown RBP6.96□□□□□ -1.3
CACUL1-202ENST00000477583 GRXCR2A6NFK2 248 aa6.95□□□□□ -1.3
CACUL1-202ENST00000477583 KCNC4Q03721 635 aa6.94□□□□□ -1.3
CACUL1-202ENST00000477583 CDCA7LQ96GN5 454 aa6.94□□□□□ -1.3
CACUL1-202ENST00000477583 ARIH1Q9Y4X5 557 aaPredicted RBP6.94□□□□□ -1.3
CACUL1-202ENST00000477583 PRIM1P49642 420 aaKnown RBP6.93□□□□□ -1.3
CACUL1-202ENST00000477583 CERKQ8TCT0 537 aa6.93□□□□□ -1.3
CACUL1-202ENST00000477583 SMAPO00193 183 aa6.92□□□□□ -1.3
CACUL1-202ENST00000477583 PRSS12P56730 875 aa6.92□□□□□ -1.3
CACUL1-202ENST00000477583 NBPF26B4DH59 902 aa6.91□□□□□ -1.3
CACUL1-202ENST00000477583 PPP4CP60510 307 aa6.9□□□□□ -1.3
CACUL1-202ENST00000477583 SAMD7Q7Z3H4 446 aa6.9□□□□□ -1.3
CACUL1-202ENST00000477583 CDHR5Q9HBB8 845 aa6.9□□□□□ -1.3
CACUL1-202ENST00000477583 FAM198AQ9UFP1 575 aa6.9□□□□□ -1.3
CACUL1-202ENST00000477583 OSBPP22059 807 aa6.89□□□□□ -1.31
CACUL1-202ENST00000477583 TATDN2Q93075 761 aa6.89□□□□□ -1.31
CACUL1-202ENST00000477583 PNMA3Q9UL41 463 aa6.89□□□□□ -1.31
CACUL1-202ENST00000477583 C3orf80F5H4A9 247 aa6.87□□□□□ -1.31
CACUL1-202ENST00000477583 RNF40O75150 1001 aa6.87□□□□□ -1.31
CACUL1-202ENST00000477583 RBM27Q9P2N5 1060 aaKnown RBP6.87□□□□□ -1.31
CACUL1-202ENST00000477583 NUDT18Q6ZVK8 323 aa6.86□□□□□ -1.31
CACUL1-202ENST00000477583 HDGFP51858 240 aaKnown RBP6.85□□□□□ -1.31
CACUL1-202ENST00000477583 TJAP1Q5JTD0 557 aa6.84□□□□□ -1.31
CACUL1-202ENST00000477583 PADI6Q6TGC4 694 aa6.84□□□□□ -1.31
CACUL1-202ENST00000477583 MTRQ99707 1265 aa6.84□□□□□ -1.31
CACUL1-202ENST00000477583 Q6ZNB5 142 aa6.82□□□□□ -1.32
CACUL1-202ENST00000477583 TTC13Q8NBP0 860 aa6.82□□□□□ -1.32
CACUL1-202ENST00000477583 NECTIN2Q92692 538 aa6.82□□□□□ -1.32
CACUL1-202ENST00000477583 IL21Q9HBE4 155 aa6.82□□□□□ -1.32
CACUL1-202ENST00000477583 NPDC1Q9NQX5 325 aaPredicted RBP6.81□□□□□ -1.32
CACUL1-202ENST00000477583 APLP1P51693 650 aa6.8□□□□□ -1.32
CACUL1-202ENST00000477583 SWT1Q5T5J6 900 aaKnown RBP6.8□□□□□ -1.32
CACUL1-202ENST00000477583 SLF2Q8IX21 1173 aa6.8□□□□□ -1.32
CACUL1-202ENST00000477583 ARHGEF1Q92888 912 aaKnown RBP6.8□□□□□ -1.32
CACUL1-202ENST00000477583 MLLT3P42568 568 aaPredicted RBP6.79□□□□□ -1.32
CACUL1-202ENST00000477583 SLC4A3P48751 1232 aa6.79□□□□□ -1.32
CACUL1-202ENST00000477583 PPP1R18Q6NYC8 613 aa6.78□□□□□ -1.32
CACUL1-202ENST00000477583 KCNV2Q8TDN2 545 aa6.78□□□□□ -1.32
CACUL1-202ENST00000477583 ZNF516Q92618 1163 aa6.78□□□□□ -1.32
CACUL1-202ENST00000477583 LAPTM4AQ15012 233 aa6.77□□□□□ -1.33
CACUL1-202ENST00000477583 PRKD2Q9BZL6 878 aa6.77□□□□□ -1.33
CACUL1-202ENST00000477583 TSHZ2Q9NRE2 1034 aa6.77□□□□□ -1.33
CACUL1-202ENST00000477583 EYA1Q99502 592 aa6.76□□□□□ -1.33
CACUL1-202ENST00000477583 GFRA3O60609 400 aa6.75□□□□□ -1.33
CACUL1-202ENST00000477583 COPS2P61201 443 aa6.75□□□□□ -1.33
CACUL1-202ENST00000477583 PTGDRQ13258 359 aa6.75□□□□□ -1.33
CACUL1-202ENST00000477583 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.75□□□□□ -1.33
CACUL1-202ENST00000477583 NKX2-3Q8TAU0 364 aa6.74□□□□□ -1.33
CACUL1-202ENST00000477583 PRR14Q9BWN1 585 aa6.74□□□□□ -1.33
CACUL1-202ENST00000477583 V9GY48 417 aaPredicted RBP6.74□□□□□ -1.33
CACUL1-202ENST00000477583 GGCXP38435 758 aa6.73□□□□□ -1.33
CACUL1-202ENST00000477583 DNAJB2P25686 324 aa6.72□□□□□ -1.33
CACUL1-202ENST00000477583 P3H3Q8IVL6 736 aa6.72□□□□□ -1.33
CACUL1-202ENST00000477583 RBM46Q8TBY0 533 aaKnown RBP6.72□□□□□ -1.33
CACUL1-202ENST00000477583 NRG2O14511 850 aaPredicted RBP6.71□□□□□ -1.34
CACUL1-202ENST00000477583 ZPR1O75312 459 aa6.71□□□□□ -1.34
CACUL1-202ENST00000477583 PCDHB3Q9Y5E6 796 aa6.71□□□□□ -1.34
CACUL1-202ENST00000477583 ADGRG1Q9Y653 693 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms