RNA–Protein interactions for RNA: ENST00000477563.6

RBBP4-211, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-211ENST00000477563 ADGBQ8N7X0 1667 aa12.54□□□□□ -0.4
RBBP4-211ENST00000477563 PTPRKQ15262 1439 aa12.54□□□□□ -0.4
RBBP4-211ENST00000477563 A2MP01023 1474 aa12.54□□□□□ -0.4
RBBP4-211ENST00000477563 PKD2Q13563 968 aa12.54□□□□□ -0.4
RBBP4-211ENST00000477563 HNRNPMP52272 730 aaKnown RBP eCLIP12.52□□□□□ -0.41
RBBP4-211ENST00000477563 ZNF335Q9H4Z2 1342 aaPredicted RBP12.51□□□□□ -0.41
RBBP4-211ENST00000477563 NCKAP5LQ9HCH0 1330 aa12.51□□□□□ -0.41
RBBP4-211ENST00000477563 ZNF777Q9ULD5 760 aaPredicted RBP12.5□□□□□ -0.41
RBBP4-211ENST00000477563 DNMT1P26358 1616 aaKnown RBP12.5□□□□□ -0.41
RBBP4-211ENST00000477563 POLR1AO95602 1720 aaPredicted RBP12.48□□□□□ -0.41
RBBP4-211ENST00000477563 FAM135AQ9P2D6 1515 aa12.48□□□□□ -0.41
RBBP4-211ENST00000477563 A2ML1A8K2U0 1454 aa12.48□□□□□ -0.41
RBBP4-211ENST00000477563 MBD5Q9P267 1494 aa12.48□□□□□ -0.41
RBBP4-211ENST00000477563 RTEL1-TNFRSF6BF6WH68 1400 aa12.48□□□□□ -0.41
RBBP4-211ENST00000477563 CFDP1Q9UEE9 299 aaPredicted RBP12.48□□□□□ -0.41
RBBP4-211ENST00000477563 CCNB3Q8WWL7 1395 aa12.47□□□□□ -0.41
RBBP4-211ENST00000477563 TIAM1Q13009 1591 aa12.47□□□□□ -0.41
RBBP4-211ENST00000477563 UBAP1LF5GYI3 381 aa12.46□□□□□ -0.41
RBBP4-211ENST00000477563 NEURL4Q96JN8 1562 aa12.45□□□□□ -0.42
RBBP4-211ENST00000477563 GGT6Q6P531 493 aa12.45□□□□□ -0.42
RBBP4-211ENST00000477563 CPS1P31327 1500 aa12.45□□□□□ -0.42
RBBP4-211ENST00000477563 DHX29Q7Z478 1369 aaKnown RBP12.44□□□□□ -0.42
RBBP4-211ENST00000477563 MTUS2Q5JR59 1369 aa12.43□□□□□ -0.42
RBBP4-211ENST00000477563 EHBP1L1Q8N3D4 1523 aa12.42□□□□□ -0.42
RBBP4-211ENST00000477563 PZPP20742 1482 aa12.42□□□□□ -0.42
RBBP4-211ENST00000477563 CEP162Q5TB80 1403 aa12.42□□□□□ -0.42
RBBP4-211ENST00000477563 KDM5DQ9BY66 1539 aa12.42□□□□□ -0.42
RBBP4-211ENST00000477563 DEPDC5O75140 1603 aa12.41□□□□□ -0.42
RBBP4-211ENST00000477563 SLC4A1APQ9BWU0 796 aaKnown RBP12.41□□□□□ -0.42
RBBP4-211ENST00000477563 MED14O60244 1454 aa12.4□□□□□ -0.42
RBBP4-211ENST00000477563 SHANK2Q9UPX8 1470 aa12.4□□□□□ -0.42
RBBP4-211ENST00000477563 ZNF644Q9H582 1327 aaPredicted RBP12.4□□□□□ -0.42
RBBP4-211ENST00000477563 SPINK5Q9NQ38 1064 aaPredicted RBP12.4□□□□□ -0.42
RBBP4-211ENST00000477563 VWDEQ8N2E2 1590 aa12.39□□□□□ -0.43
RBBP4-211ENST00000477563 TNRQ92752 1358 aa12.39□□□□□ -0.43
RBBP4-211ENST00000477563 MED1Q15648 1581 aaPredicted RBP12.39□□□□□ -0.43
RBBP4-211ENST00000477563 ALKQ9UM73 1620 aa12.38□□□□□ -0.43
RBBP4-211ENST00000477563 TOM1O60784 492 aa12.38□□□□□ -0.43
RBBP4-211ENST00000477563 RSPH4AQ5TD94 716 aa12.38□□□□□ -0.43
RBBP4-211ENST00000477563 CCDC141Q6ZP82 1450 aa12.38□□□□□ -0.43
RBBP4-211ENST00000477563 NLRP1Q9C000 1473 aa12.38□□□□□ -0.43
RBBP4-211ENST00000477563 FBXO31Q5XUX0 539 aaPredicted RBP12.37□□□□□ -0.43
RBBP4-211ENST00000477563 MIA2Q96PC5 1412 aa12.37□□□□□ -0.43
RBBP4-211ENST00000477563 ARHGEF5Q12774 1597 aa12.36□□□□□ -0.43
RBBP4-211ENST00000477563 CAPN15O75808 1086 aa12.36□□□□□ -0.43
RBBP4-211ENST00000477563 HSPA1LP34931 641 aa12.36□□□□□ -0.43
RBBP4-211ENST00000477563 ZC3H13Q5T200 1668 aaKnown RBP12.35□□□□□ -0.43
RBBP4-211ENST00000477563 UGGT1Q9NYU2 1555 aa12.35□□□□□ -0.43
RBBP4-211ENST00000477563 KIF3BO15066 747 aa12.35□□□□□ -0.43
RBBP4-211ENST00000477563 ANKLE2Q86XL3 938 aa12.35□□□□□ -0.43
RBBP4-211ENST00000477563 THEMISQ8N1K5 641 aaPredicted RBP12.35□□□□□ -0.43
RBBP4-211ENST00000477563 RNF17Q9BXT8 1623 aaKnown RBP12.35□□□□□ -0.43
RBBP4-211ENST00000477563 IQGAP1P46940 1657 aa12.35□□□□□ -0.43
RBBP4-211ENST00000477563 CAMSAP2Q08AD1 1489 aa12.34□□□□□ -0.43
RBBP4-211ENST00000477563 STRCP1A6NGW2 1772 aa12.34□□□□□ -0.43
RBBP4-211ENST00000477563 WASHC2CQ9Y4E1 1318 aa12.34□□□□□ -0.43
RBBP4-211ENST00000477563 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.33□□□□□ -0.44
RBBP4-211ENST00000477563 NPHP4O75161 1426 aaPredicted RBP12.33□□□□□ -0.44
RBBP4-211ENST00000477563 MAST1Q9Y2H9 1570 aa12.33□□□□□ -0.44
RBBP4-211ENST00000477563 NCOA2Q15596 1464 aa12.33□□□□□ -0.44
RBBP4-211ENST00000477563 SYNMO15061 1565 aa12.32□□□□□ -0.44
RBBP4-211ENST00000477563 EIF2AK4Q9P2K8 1649 aaKnown RBP12.32□□□□□ -0.44
RBBP4-211ENST00000477563 PIP4K2BP78356 416 aa12.31□□□□□ -0.44
RBBP4-211ENST00000477563 APLP2Q06481 763 aa12.3□□□□□ -0.44
RBBP4-211ENST00000477563 ABCC3O15438 1527 aa12.3□□□□□ -0.44
RBBP4-211ENST00000477563 LRRC7Q96NW7 1537 aa12.3□□□□□ -0.44
RBBP4-211ENST00000477563 UBR1Q8IWV7 1749 aa12.29□□□□□ -0.44
RBBP4-211ENST00000477563 MROH1Q8NDA8 1641 aa12.29□□□□□ -0.44
RBBP4-211ENST00000477563 TSPY4P0CV99 314 aa12.28□□□□□ -0.44
RBBP4-211ENST00000477563 TSPY10P0CW01 314 aa12.28□□□□□ -0.44
RBBP4-211ENST00000477563 DSG3P32926 999 aa12.28□□□□□ -0.44
RBBP4-211ENST00000477563 ERVK-7P63135 1459 aa12.27□□□□□ -0.44
RBBP4-211ENST00000477563 XIRP1Q702N8 1843 aaKnown RBP12.26□□□□□ -0.45
RBBP4-211ENST00000477563 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
RBBP4-211ENST00000477563 CEP152O94986 1710 aa12.25□□□□□ -0.45
RBBP4-211ENST00000477563 MYCNP04198 464 aaPredicted RBP12.25□□□□□ -0.45
RBBP4-211ENST00000477563 ARHGAP23Q9P227 1491 aa12.25□□□□□ -0.45
RBBP4-211ENST00000477563 SLIT1O75093 1534 aa12.25□□□□□ -0.45
RBBP4-211ENST00000477563 ARHGAP31Q2M1Z3 1444 aa12.24□□□□□ -0.45
RBBP4-211ENST00000477563 CFAP65Q6ZU64 1925 aaKnown RBP12.24□□□□□ -0.45
RBBP4-211ENST00000477563 LRRC9Q6ZRR7 1453 aa12.23□□□□□ -0.45
RBBP4-211ENST00000477563 KDM5AP29375 1690 aaKnown RBP12.22□□□□□ -0.45
RBBP4-211ENST00000477563 MAP3K1Q13233 1512 aa12.22□□□□□ -0.45
RBBP4-211ENST00000477563 DUOX2Q9NRD8 1548 aa12.22□□□□□ -0.45
RBBP4-211ENST00000477563 SCAF11Q99590 1463 aaKnown RBP12.22□□□□□ -0.45
RBBP4-211ENST00000477563 PRDM15P57071 1507 aaPredicted RBP12.21□□□□□ -0.45
RBBP4-211ENST00000477563 FOXD4L1Q9NU39 408 aa12.2□□□□□ -0.46
RBBP4-211ENST00000477563 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
RBBP4-211ENST00000477563 LTKP29376 864 aa12.18□□□□□ -0.46
RBBP4-211ENST00000477563 RGS17Q9UGC6 210 aaPredicted RBP12.18□□□□□ -0.46
RBBP4-211ENST00000477563 CROCC2H7BZ55 1655 aa12.18□□□□□ -0.46
RBBP4-211ENST00000477563 FAM135BQ49AJ0 1406 aa12.18□□□□□ -0.46
RBBP4-211ENST00000477563 MYOM3Q5VTT5 1437 aa12.18□□□□□ -0.46
RBBP4-211ENST00000477563 VPS8Q8N3P4 1428 aa12.18□□□□□ -0.46
RBBP4-211ENST00000477563 PIK3C2BO00750 1634 aa12.17□□□□□ -0.46
RBBP4-211ENST00000477563 ERBINQ96RT1 1412 aa12.17□□□□□ -0.46
RBBP4-211ENST00000477563 TET3O43151 1660 aa12.16□□□□□ -0.46
RBBP4-211ENST00000477563 TXNDC2Q86VQ3 553 aa12.16□□□□□ -0.46
RBBP4-211ENST00000477563 LMTK2Q8IWU2 1503 aa12.16□□□□□ -0.46
RBBP4-211ENST00000477563 TMEM2Q9UHN6 1383 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms